Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.65□□□□□ -2.51
NKX6-2Q9C056 HMGN2P22-201ENST00000427588 175 ntBASIC-0.65□□□□□ -2.51
NKX6-2Q9C056 RNU6-720P-201ENST00000516363 108 ntBASIC-0.65□□□□□ -2.51
NKX6-2Q9C056 MIR4263-201ENST00000584745 83 ntBASIC-0.65□□□□□ -2.51
NKX6-2Q9C056 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.66□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.66□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.66□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.66□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.66□□□□□ -2.52
NKX6-2Q9C056 RNU6-102P-201ENST00000384485 104 ntBASIC-0.66□□□□□ -2.52
NKX6-2Q9C056 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.66□□□□□ -2.52
NKX6-2Q9C056 MIR876-201ENST00000401147 81 ntBASIC-0.66□□□□□ -2.52
NKX6-2Q9C056 SNORD110-201ENST00000408189 75 ntBASIC-0.66□□□□□ -2.52
NKX6-2Q9C056 AC244250.2-201ENST00000418731 148 ntBASIC-0.66□□□□□ -2.52
NKX6-2Q9C056 AC109327.2-201ENST00000448339 378 ntBASIC-0.66□□□□□ -2.52
NKX6-2Q9C056 U8.20-201ENST00000459445 131 ntBASIC-0.66□□□□□ -2.52
NKX6-2Q9C056 RNU7-80P-201ENST00000459562 61 ntBASIC-0.66□□□□□ -2.52
NKX6-2Q9C056 SNORD116.3-201ENST00000517176 78 ntBASIC-0.66□□□□□ -2.52
NKX6-2Q9C056 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.66□□□□□ -2.52
NKX6-2Q9C056 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.66□□□□□ -2.52
NKX6-2Q9C056 SNORD114-11-201ENST00000363738 75 ntBASIC-0.67□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.67□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.67□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.67□□□□□ -2.52
NKX6-2Q9C056 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.67□□□□□ -2.52
NKX6-2Q9C056 RNU6-811P-201ENST00000384069 107 ntBASIC-0.67□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.67□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.67□□□□□ -2.52
NKX6-2Q9C056 RNU6-130P-201ENST00000411112 103 ntBASIC-0.67□□□□□ -2.52
NKX6-2Q9C056 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.67□□□□□ -2.52
NKX6-2Q9C056 RPS29P8-201ENST00000445109 171 ntBASIC-0.67□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.67□□□□□ -2.52
NKX6-2Q9C056 NAMPTP3-201ENST00000569273 224 ntBASIC-0.67□□□□□ -2.52
NKX6-2Q9C056 AL360085.1-201ENST00000604713 532 ntBASIC-0.67□□□□□ -2.52
NKX6-2Q9C056 MTND5P32-201ENST00000560711 1802 ntBASIC-0.68□□□□□ -2.52
NKX6-2Q9C056 RNU6-845P-201ENST00000362578 103 ntBASIC-0.68□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.68□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.68□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.68□□□□□ -2.52
NKX6-2Q9C056 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.68□□□□□ -2.52
NKX6-2Q9C056 MTND4LP11-201ENST00000422184 280 ntBASIC-0.68□□□□□ -2.52
NKX6-2Q9C056 PMCHL1-202ENST00000423102 261 ntBASIC-0.68□□□□□ -2.52
NKX6-2Q9C056 BX276092.1-201ENST00000427368 251 ntBASIC-0.68□□□□□ -2.52
NKX6-2Q9C056 RNU6-507P-201ENST00000516045 100 ntBASIC-0.68□□□□□ -2.52
NKX6-2Q9C056 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.68□□□□□ -2.52
NKX6-2Q9C056 RNU6-358P-201ENST00000516564 75 ntBASIC-0.68□□□□□ -2.52
NKX6-2Q9C056 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.68□□□□□ -2.52
NKX6-2Q9C056 MIR5197-201ENST00000583721 112 ntBASIC-0.68□□□□□ -2.52
NKX6-2Q9C056 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.68□□□□□ -2.52
NKX6-2Q9C056 PART1_1.1-201ENST00000611761 217 ntBASIC-0.68□□□□□ -2.52
NKX6-2Q9C056 AC105081.1-201ENST00000617727 106 ntBASIC-0.68□□□□□ -2.52
NKX6-2Q9C056 AC021613.1-201ENST00000623880 111 ntBASIC-0.68□□□□□ -2.52
NKX6-2Q9C056 MTND4LP32-201ENST00000636111 270 ntBASIC-0.68□□□□□ -2.52
NKX6-2Q9C056 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.68□□□□□ -2.52
NKX6-2Q9C056 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.68□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 SNORD113-8-201ENST00000363497 74 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 RNA5SP403-201ENST00000363598 108 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 RNA5SP457-201ENST00000363657 124 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 RNU4-16P-201ENST00000364737 141 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 RNU6-484P-201ENST00000384016 107 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 MIR516B1-201ENST00000385211 90 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 MIR526A2-201ENST00000390198 65 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 SNORD41.1-201ENST00000391000 69 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 RNA5SP484-201ENST00000458857 111 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 AL356055.1-201ENST00000602528 446 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 AC006006.1-201ENST00000603082 144 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 AC007485.1-201ENST00000616755 206 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 AC104985.2-201ENST00000620598 500 ntBASIC-0.69□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.7□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.7□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.7□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.7□□□□□ -2.52
NKX6-2Q9C056 RNU6-480P-201ENST00000384332 107 ntBASIC-0.7□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.7□□□□□ -2.52
NKX6-2Q9C056 HSPE1P25-201ENST00000455484 251 ntBASIC-0.7□□□□□ -2.52
NKX6-2Q9C056 AC114755.3-201ENST00000481111 251 ntBASIC-0.7□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.7□□□□□ -2.52
NKX6-2Q9C056 MIR3129-201ENST00000581095 76 ntBASIC-0.7□□□□□ -2.52
NKX6-2Q9C056 AL138825.1-201ENST00000618587 192 ntBASIC-0.7□□□□□ -2.52
NKX6-2Q9C056 RNU4-84P-201ENST00000364200 139 ntBASIC-0.71□□□□□ -2.52
NKX6-2Q9C056 SNORD81.2-201ENST00000365153 76 ntBASIC-0.71□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.71□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.71□□□□□ -2.52
NKX6-2Q9C056 RNU6-1215P-201ENST00000384441 102 ntBASIC-0.71□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.71□□□□□ -2.52
NKX6-2Q9C056 MIR489-201ENST00000384923 84 ntBASIC-0.71□□□□□ -2.52
NKX6-2Q9C056 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.71□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.71□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.71□□□□□ -2.52
NKX6-2Q9C056 RNU7-79P-201ENST00000516082 62 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 402.8 ms