Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.17□□□□□ -2.76
SCAPERQ9BY12 RNU6-476P-201ENST00000384726 107 ntBASIC-2.17□□□□□ -2.76
SCAPERQ9BY12 BX295541.1-201ENST00000417774 250 ntBASIC-2.17□□□□□ -2.76
SCAPERQ9BY12 AC084290.1-201ENST00000434995 374 ntBASIC-2.17□□□□□ -2.76
SCAPERQ9BY12 AL033528.1-201ENST00000453780 140 ntBASIC-2.17□□□□□ -2.76
SCAPERQ9BY12 SNORD54-201ENST00000459159 67 ntBASIC-2.17□□□□□ -2.76
SCAPERQ9BY12 AC124303.1-201ENST00000605703 360 ntBASIC-2.17□□□□□ -2.76
SCAPERQ9BY12 RNU6-961P-201ENST00000363893 105 ntBASIC-2.18□□□□□ -2.76
SCAPERQ9BY12 RNU6-95P-201ENST00000384697 107 ntBASIC-2.18□□□□□ -2.76
SCAPERQ9BY12 MIR652-201ENST00000385278 98 ntBASIC-2.18□□□□□ -2.76
SCAPERQ9BY12 AL606845.1-201ENST00000404881 255 ntBASIC-2.18□□□□□ -2.76
SCAPERQ9BY12 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-2.18□□□□□ -2.76
SCAPERQ9BY12 RNU7-87P-201ENST00000459343 62 ntBASIC-2.18□□□□□ -2.76
SCAPERQ9BY12 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-2.18□□□□□ -2.76
SCAPERQ9BY12 RNU6-155P-201ENST00000516347 100 ntBASIC-2.18□□□□□ -2.76
SCAPERQ9BY12 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-2.18□□□□□ -2.76
SCAPERQ9BY12 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-2.18□□□□□ -2.76
SCAPERQ9BY12 MIR6818-201ENST00000621576 65 ntBASIC-2.18□□□□□ -2.76
SCAPERQ9BY12 RNY4P28-201ENST00000365281 93 ntBASIC-2.19□□□□□ -2.76
SCAPERQ9BY12 RNU6-596P-201ENST00000365395 98 ntBASIC-2.19□□□□□ -2.76
SCAPERQ9BY12 RNU6-38P-201ENST00000384085 107 ntBASIC-2.19□□□□□ -2.76
SCAPERQ9BY12 Y_RNA.440-201ENST00000384120 114 ntBASIC-2.19□□□□□ -2.76
SCAPERQ9BY12 Y_RNA.446-201ENST00000384178 104 ntBASIC-2.19□□□□□ -2.76
SCAPERQ9BY12 RNU6-588P-201ENST00000410281 105 ntBASIC-2.19□□□□□ -2.76
SCAPERQ9BY12 SNORA36B-201ENST00000410438 131 ntBASIC-2.19□□□□□ -2.76
SCAPERQ9BY12 RNU6-1208P-201ENST00000459588 107 ntBASIC-2.19□□□□□ -2.76
SCAPERQ9BY12 RNU6-470P-201ENST00000515954 104 ntBASIC-2.19□□□□□ -2.76
SCAPERQ9BY12 RNU6-1170P-201ENST00000515974 106 ntBASIC-2.19□□□□□ -2.76
SCAPERQ9BY12 RNU6-412P-201ENST00000516434 106 ntBASIC-2.19□□□□□ -2.76
SCAPERQ9BY12 RNY4-201ENST00000516507 96 ntBASIC-2.19□□□□□ -2.76
SCAPERQ9BY12 MIR548AG2-201ENST00000581228 64 ntBASIC-2.19□□□□□ -2.76
SCAPERQ9BY12 AP001542.1-201ENST00000591314 200 ntBASIC-2.19□□□□□ -2.76
SCAPERQ9BY12 Y_RNA.214-201ENST00000364201 112 ntBASIC-2.2□□□□□ -2.76
SCAPERQ9BY12 Y_RNA.785-201ENST00000384290 109 ntBASIC-2.2□□□□□ -2.76
SCAPERQ9BY12 RNU4-70P-201ENST00000384579 139 ntBASIC-2.2□□□□□ -2.76
SCAPERQ9BY12 MIR29B1-201ENST00000385015 81 ntBASIC-2.2□□□□□ -2.76
SCAPERQ9BY12 RNA5SP86-201ENST00000390869 98 ntBASIC-2.2□□□□□ -2.76
SCAPERQ9BY12 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-2.2□□□□□ -2.76
SCAPERQ9BY12 AC091912.2-201ENST00000624798 167 ntBASIC-2.2□□□□□ -2.76
SCAPERQ9BY12 snoR1.1-201ENST00000628177 80 ntBASIC-2.2□□□□□ -2.76
SCAPERQ9BY12 SNORA2.1-201ENST00000363089 137 ntBASIC-2.21□□□□□ -2.76
SCAPERQ9BY12 SNORA20-201ENST00000384662 132 ntBASIC-2.21□□□□□ -2.76
SCAPERQ9BY12 MIR548A2-201ENST00000384956 97 ntBASIC-2.21□□□□□ -2.76
SCAPERQ9BY12 RNU4-61P-201ENST00000411243 107 ntBASIC-2.21□□□□□ -2.76
SCAPERQ9BY12 PART1_1.1-201ENST00000611761 217 ntBASIC-2.21□□□□□ -2.76
SCAPERQ9BY12 MIR6841-201ENST00000637129 72 ntBASIC-2.21□□□□□ -2.76
SCAPERQ9BY12 Y_RNA.351-201ENST00000365436 96 ntBASIC-2.22□□□□□ -2.76
SCAPERQ9BY12 SNORA40.3-201ENST00000390964 122 ntBASIC-2.22□□□□□ -2.76
SCAPERQ9BY12 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-2.22□□□□□ -2.76
SCAPERQ9BY12 AC100767.1-201ENST00000528178 123 ntBASIC-2.22□□□□□ -2.76
SCAPERQ9BY12 MIR548AB-201ENST00000584917 84 ntBASIC-2.22□□□□□ -2.76
SCAPERQ9BY12 AL022161.1-201ENST00000604390 213 ntBASIC-2.22□□□□□ -2.76
SCAPERQ9BY12 SNORA22.1-201ENST00000362701 134 ntBASIC-2.23□□□□□ -2.77
SCAPERQ9BY12 RNU6-484P-201ENST00000384016 107 ntBASIC-2.23□□□□□ -2.77
SCAPERQ9BY12 RNU2-51P-201ENST00000410708 197 ntBASIC-2.23□□□□□ -2.77
SCAPERQ9BY12 AF228730.4-201ENST00000421457 183 ntBASIC-2.23□□□□□ -2.77
SCAPERQ9BY12 AC098479.1-201ENST00000609225 154 ntBASIC-2.23□□□□□ -2.77
SCAPERQ9BY12 Y_RNA.27-201ENST00000362540 103 ntBASIC-2.24□□□□□ -2.77
SCAPERQ9BY12 RNU6-254P-201ENST00000363377 107 ntBASIC-2.24□□□□□ -2.77
SCAPERQ9BY12 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.24□□□□□ -2.77
SCAPERQ9BY12 Y_RNA.244-201ENST00000364484 109 ntBASIC-2.24□□□□□ -2.77
SCAPERQ9BY12 Y_RNA.366-201ENST00000365540 102 ntBASIC-2.24□□□□□ -2.77
SCAPERQ9BY12 RNU6-1189P-201ENST00000383958 107 ntBASIC-2.24□□□□□ -2.77
SCAPERQ9BY12 MIR124-2-201ENST00000385081 109 ntBASIC-2.24□□□□□ -2.77
SCAPERQ9BY12 RNU6-1000P-201ENST00000391066 106 ntBASIC-2.24□□□□□ -2.77
SCAPERQ9BY12 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.25□□□□□ -2.77
SCAPERQ9BY12 SNORD37.1-201ENST00000390968 65 ntBASIC-2.25□□□□□ -2.77
SCAPERQ9BY12 RNU6-466P-201ENST00000391224 103 ntBASIC-2.25□□□□□ -2.77
SCAPERQ9BY12 UBE2V1P12-201ENST00000503954 474 ntBASIC-2.25□□□□□ -2.77
SCAPERQ9BY12 SNORA18.6-201ENST00000516792 115 ntBASIC-2.25□□□□□ -2.77
SCAPERQ9BY12 MIR335-201ENST00000362173 94 ntBASIC-2.25□□□□□ -2.77
SCAPERQ9BY12 Y_RNA.159-201ENST00000363674 87 ntBASIC-2.25□□□□□ -2.77
SCAPERQ9BY12 SNORD61-201ENST00000384252 73 ntBASIC-2.25□□□□□ -2.77
SCAPERQ9BY12 Y_RNA.486-201ENST00000384398 107 ntBASIC-2.25□□□□□ -2.77
SCAPERQ9BY12 MIR519A1-201ENST00000385257 85 ntBASIC-2.25□□□□□ -2.77
SCAPERQ9BY12 AF228730.3-201ENST00000436691 102 ntBASIC-2.25□□□□□ -2.77
SCAPERQ9BY12 RNA5SP401-201ENST00000515920 127 ntBASIC-2.25□□□□□ -2.77
SCAPERQ9BY12 Y_RNA.809-201ENST00000516058 95 ntBASIC-2.25□□□□□ -2.77
SCAPERQ9BY12 MIR6874-201ENST00000635894 71 ntBASIC-2.25□□□□□ -2.77
SCAPERQ9BY12 RNU6-704P-201ENST00000364162 103 ntBASIC-2.26□□□□□ -2.77
SCAPERQ9BY12 AL590004.1-201ENST00000405321 300 ntBASIC-2.26□□□□□ -2.77
SCAPERQ9BY12 AC098826.2-201ENST00000452011 651 ntBASIC-2.26□□□□□ -2.77
SCAPERQ9BY12 Y_RNA.679-201ENST00000516416 91 ntBASIC-2.26□□□□□ -2.77
SCAPERQ9BY12 MIR4662B-201ENST00000579498 81 ntBASIC-2.26□□□□□ -2.77
SCAPERQ9BY12 RNU6-1301P-201ENST00000362724 104 ntBASIC-2.27□□□□□ -2.77
SCAPERQ9BY12 RNU6-888P-201ENST00000363010 101 ntBASIC-2.27□□□□□ -2.77
SCAPERQ9BY12 RNY3P14-201ENST00000384309 102 ntBASIC-2.27□□□□□ -2.77
SCAPERQ9BY12 RNU7-80P-201ENST00000459562 61 ntBASIC-2.27□□□□□ -2.77
SCAPERQ9BY12 Y_RNA.631-201ENST00000459607 101 ntBASIC-2.27□□□□□ -2.77
SCAPERQ9BY12 RNU7-35P-201ENST00000517174 62 ntBASIC-2.27□□□□□ -2.77
SCAPERQ9BY12 AC145350.1-201ENST00000567426 208 ntBASIC-2.27□□□□□ -2.77
SCAPERQ9BY12 MIR5701-3-201ENST00000578890 82 ntBASIC-2.27□□□□□ -2.77
SCAPERQ9BY12 MIR5701-1-201ENST00000585138 82 ntBASIC-2.27□□□□□ -2.77
SCAPERQ9BY12 MIR5701-2-201ENST00000615634 82 ntBASIC-2.27□□□□□ -2.77
SCAPERQ9BY12 U4.1-201ENST00000620349 87 ntBASIC-2.27□□□□□ -2.77
SCAPERQ9BY12 RNA5SP93-201ENST00000362525 114 ntBASIC-2.28□□□□□ -2.77
SCAPERQ9BY12 Y_RNA.634-201ENST00000364811 113 ntBASIC-2.28□□□□□ -2.77
SCAPERQ9BY12 RNU6-524P-201ENST00000384270 107 ntBASIC-2.28□□□□□ -2.77
SCAPERQ9BY12 RNU6-1158P-201ENST00000391167 107 ntBASIC-2.28□□□□□ -2.77
SCAPERQ9BY12 AC027449.1-201ENST00000608890 407 ntBASIC-2.28□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 256 ms