Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 RNU6-602P-201ENST00000411155 105 ntBASIC1.48□□□□□ -2.17
VRK1Q99986 SNORA31.2-201ENST00000516019 134 ntBASIC1.48□□□□□ -2.17
VRK1Q99986 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.48□□□□□ -2.17
VRK1Q99986 MIR4305-201ENST00000583252 102 ntBASIC1.48□□□□□ -2.17
VRK1Q99986 AP000648.3-201ENST00000623539 4507 ntBASIC1.47□□□□□ -2.17
VRK1Q99986 RNU4-16P-201ENST00000364737 141 ntBASIC1.47□□□□□ -2.17
VRK1Q99986 SNORD38B-201ENST00000384690 67 ntBASIC1.47□□□□□ -2.17
VRK1Q99986 POLR2J4-204ENST00000418424 324 ntBASIC1.47□□□□□ -2.17
VRK1Q99986 RN7SKP19-201ENST00000516016 252 ntBASIC1.47□□□□□ -2.17
VRK1Q99986 MIR2115-201ENST00000516657 100 ntBASIC1.47□□□□□ -2.17
VRK1Q99986 AC021443.1-201ENST00000604478 211 ntBASIC1.47□□□□□ -2.17
VRK1Q99986 SNORD38B-202ENST00000625943 69 ntBASIC1.47□□□□□ -2.17
VRK1Q99986 SNORA22.1-201ENST00000362701 134 ntBASIC1.46□□□□□ -2.18
VRK1Q99986 Y_RNA.218-201ENST00000364218 104 ntBASIC1.46□□□□□ -2.18
VRK1Q99986 MT-TN-201ENST00000387400 73 ntBASIC1.46□□□□□ -2.18
VRK1Q99986 AC090844.1-201ENST00000422019 156 ntBASIC1.46□□□□□ -2.18
VRK1Q99986 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.46□□□□□ -2.18
VRK1Q99986 Y_RNA.71-201ENST00000362892 104 ntBASIC1.45□□□□□ -2.18
VRK1Q99986 Y_RNA.338-201ENST00000365320 114 ntBASIC1.45□□□□□ -2.18
VRK1Q99986 AL022718.1-201ENST00000412004 84 ntBASIC1.45□□□□□ -2.18
VRK1Q99986 AC108667.1-201ENST00000428618 249 ntBASIC1.45□□□□□ -2.18
VRK1Q99986 IGKV1-22-201ENST00000524313 326 ntBASIC1.45□□□□□ -2.18
VRK1Q99986 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.45□□□□□ -2.18
VRK1Q99986 RNU6-235P-201ENST00000362644 107 ntBASIC1.44□□□□□ -2.18
VRK1Q99986 Y_RNA.363-201ENST00000365529 113 ntBASIC1.44□□□□□ -2.18
VRK1Q99986 SNORD116-14-201ENST00000383894 92 ntBASIC1.44□□□□□ -2.18
VRK1Q99986 SNORD116-17-201ENST00000383929 92 ntBASIC1.44□□□□□ -2.18
VRK1Q99986 SNORD116-15-201ENST00000384445 92 ntBASIC1.44□□□□□ -2.18
VRK1Q99986 RNU6-1117P-201ENST00000384525 104 ntBASIC1.44□□□□□ -2.18
VRK1Q99986 SNORD116-19-201ENST00000384729 92 ntBASIC1.44□□□□□ -2.18
VRK1Q99986 RNU6-613P-201ENST00000410412 108 ntBASIC1.44□□□□□ -2.18
VRK1Q99986 RNA5SP136-201ENST00000410906 107 ntBASIC1.44□□□□□ -2.18
VRK1Q99986 RNU7-164P-201ENST00000459221 62 ntBASIC1.44□□□□□ -2.18
VRK1Q99986 RN7SKP179-201ENST00000516126 217 ntBASIC1.44□□□□□ -2.18
VRK1Q99986 SEPT14P17-201ENST00000617978 177 ntBASIC1.44□□□□□ -2.18
VRK1Q99986 MIR6516-201ENST00000630554 81 ntBASIC1.44□□□□□ -2.18
VRK1Q99986 MIR377-201ENST00000362145 69 ntBASIC1.43□□□□□ -2.18
VRK1Q99986 SNORD115-2-201ENST00000362842 82 ntBASIC1.43□□□□□ -2.18
VRK1Q99986 Y_RNA.298-201ENST00000364960 107 ntBASIC1.43□□□□□ -2.18
VRK1Q99986 SNORD115-20-201ENST00000365099 82 ntBASIC1.43□□□□□ -2.18
VRK1Q99986 AC244023.1-201ENST00000426884 112 ntBASIC1.43□□□□□ -2.18
VRK1Q99986 AL603825.1-201ENST00000438481 80 ntBASIC1.43□□□□□ -2.18
VRK1Q99986 RNU2-35P-201ENST00000516446 142 ntBASIC1.43□□□□□ -2.18
VRK1Q99986 MIR4264-201ENST00000583520 66 ntBASIC1.43□□□□□ -2.18
VRK1Q99986 AC242498.1-201ENST00000604134 111 ntBASIC1.43□□□□□ -2.18
VRK1Q99986 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
VRK1Q99986 MIR378A-201ENST00000362177 66 ntBASIC1.42□□□□□ -2.18
VRK1Q99986 Y_RNA.127-201ENST00000363386 109 ntBASIC1.42□□□□□ -2.18
VRK1Q99986 SNORD58C-201ENST00000365223 64 ntBASIC1.42□□□□□ -2.18
VRK1Q99986 SNORD26-201ENST00000384147 75 ntBASIC1.42□□□□□ -2.18
VRK1Q99986 SNORA80D-201ENST00000384488 135 ntBASIC1.42□□□□□ -2.18
VRK1Q99986 MIRLET7F2-201ENST00000385277 83 ntBASIC1.42□□□□□ -2.18
VRK1Q99986 AL591704.2-201ENST00000421658 181 ntBASIC1.42□□□□□ -2.18
VRK1Q99986 AC008267.6-201ENST00000441664 139 ntBASIC1.42□□□□□ -2.18
VRK1Q99986 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.42□□□□□ -2.18
VRK1Q99986 RNU1-98P-201ENST00000458992 160 ntBASIC1.42□□□□□ -2.18
VRK1Q99986 AC113410.1-201ENST00000505029 247 ntBASIC1.42□□□□□ -2.18
VRK1Q99986 AC108729.3-201ENST00000513484 108 ntBASIC1.42□□□□□ -2.18
VRK1Q99986 RNU7-123P-201ENST00000515911 60 ntBASIC1.42□□□□□ -2.18
VRK1Q99986 RNU6-659P-201ENST00000516454 104 ntBASIC1.42□□□□□ -2.18
VRK1Q99986 RNU6-1234P-201ENST00000516877 103 ntBASIC1.42□□□□□ -2.18
VRK1Q99986 SNORD53B-201ENST00000577887 78 ntBASIC1.42□□□□□ -2.18
VRK1Q99986 AP000753.3-201ENST00000604083 169 ntBASIC1.42□□□□□ -2.18
VRK1Q99986 AL157777.2-201ENST00000258070 137 ntBASIC1.41□□□□□ -2.18
VRK1Q99986 Y_RNA.531-201ENST00000384589 121 ntBASIC1.41□□□□□ -2.18
VRK1Q99986 RNU6-910P-201ENST00000390844 107 ntBASIC1.41□□□□□ -2.18
VRK1Q99986 SNORD12-201ENST00000391002 90 ntBASIC1.41□□□□□ -2.18
VRK1Q99986 SNORA17.3-201ENST00000391159 129 ntBASIC1.41□□□□□ -2.18
VRK1Q99986 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.41□□□□□ -2.18
VRK1Q99986 SNORD79.1-201ENST00000516069 84 ntBASIC1.41□□□□□ -2.18
VRK1Q99986 RNU6-62P-201ENST00000516526 102 ntBASIC1.41□□□□□ -2.18
VRK1Q99986 RNU6-1258P-201ENST00000516911 111 ntBASIC1.41□□□□□ -2.18
VRK1Q99986 Y_RNA.712-201ENST00000517011 92 ntBASIC1.41□□□□□ -2.18
VRK1Q99986 SNORA70.22-201ENST00000517160 124 ntBASIC1.41□□□□□ -2.18
VRK1Q99986 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.41□□□□□ -2.18
VRK1Q99986 AC004812.1-201ENST00000540773 146 ntBASIC1.41□□□□□ -2.18
VRK1Q99986 RNU6-580P-201ENST00000365159 107 ntBASIC1.4□□□□□ -2.19
VRK1Q99986 RNU6-22P-201ENST00000384355 107 ntBASIC1.4□□□□□ -2.19
VRK1Q99986 SNORA67.5-201ENST00000391036 107 ntBASIC1.4□□□□□ -2.19
VRK1Q99986 SNORA75.2-201ENST00000391138 150 ntBASIC1.4□□□□□ -2.19
VRK1Q99986 SNORA75.3-201ENST00000391231 150 ntBASIC1.4□□□□□ -2.19
VRK1Q99986 RNU6-955P-201ENST00000410497 104 ntBASIC1.4□□□□□ -2.19
VRK1Q99986 RNU7-113P-201ENST00000459273 62 ntBASIC1.4□□□□□ -2.19
VRK1Q99986 RNU7-21P-201ENST00000459430 62 ntBASIC1.4□□□□□ -2.19
VRK1Q99986 RNU6-772P-201ENST00000516042 105 ntBASIC1.4□□□□□ -2.19
VRK1Q99986 RNU6-781P-201ENST00000516377 101 ntBASIC1.4□□□□□ -2.19
VRK1Q99986 RNY4P20-201ENST00000516678 93 ntBASIC1.4□□□□□ -2.19
VRK1Q99986 AL512326.2-201ENST00000426359 151 ntBASIC1.39□□□□□ -2.19
VRK1Q99986 AL606753.1-201ENST00000427435 87 ntBASIC1.39□□□□□ -2.19
VRK1Q99986 RNU7-107P-201ENST00000459121 61 ntBASIC1.39□□□□□ -2.19
VRK1Q99986 snoU13.2-201ENST00000459201 104 ntBASIC1.39□□□□□ -2.19
VRK1Q99986 RNU6-1061P-201ENST00000516530 99 ntBASIC1.39□□□□□ -2.19
VRK1Q99986 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
VRK1Q99986 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
VRK1Q99986 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
VRK1Q99986 Y_RNA.171-201ENST00000363760 102 ntBASIC1.38□□□□□ -2.19
VRK1Q99986 Y_RNA.299-201ENST00000364973 94 ntBASIC1.38□□□□□ -2.19
VRK1Q99986 COX6CP6-201ENST00000490840 228 ntBASIC1.38□□□□□ -2.19
VRK1Q99986 RNU6-1333P-201ENST00000516162 93 ntBASIC1.38□□□□□ -2.19
VRK1Q99986 RNU6-479P-201ENST00000516348 105 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms