Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 MIR136-201ENST00000385207 82 ntBASIC1.48□□□□□ -2.17
MEIS3Q99687 SNORD12C-201ENST00000386307 89 ntBASIC1.48□□□□□ -2.17
MEIS3Q99687 RNU6-913P-201ENST00000390913 95 ntBASIC1.48□□□□□ -2.17
MEIS3Q99687 RNU6-554P-201ENST00000410466 106 ntBASIC1.48□□□□□ -2.17
MEIS3Q99687 RNU6-321P-201ENST00000410912 106 ntBASIC1.48□□□□□ -2.17
MEIS3Q99687 HMGN1P33-201ENST00000432945 451 ntBASIC1.48□□□□□ -2.17
MEIS3Q99687 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.48□□□□□ -2.17
MEIS3Q99687 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.48□□□□□ -2.17
MEIS3Q99687 MIR424-201ENST00000362227 98 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-34-201ENST00000362441 82 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 RNU6-1298P-201ENST00000362456 101 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-12-201ENST00000362583 82 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-29-201ENST00000362834 82 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-9-201ENST00000362912 82 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-21-201ENST00000362963 81 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-14-201ENST00000363090 81 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-13-201ENST00000363358 82 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-41-201ENST00000363608 82 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-11-201ENST00000363616 82 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-5-201ENST00000363633 82 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-39-201ENST00000363694 82 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-4-201ENST00000363810 82 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-16-201ENST00000363887 82 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-6-201ENST00000363942 82 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-42-201ENST00000364273 82 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 RNU6-755P-201ENST00000364400 103 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-15-201ENST00000364809 81 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-1-201ENST00000364961 82 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-26-201ENST00000365067 82 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-10-201ENST00000365073 81 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 Y_RNA.344-201ENST00000365381 112 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-43-201ENST00000365503 82 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-36-201ENST00000365629 82 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 RNU6-950P-201ENST00000384651 107 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 RNA5SP136-201ENST00000410906 107 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 RNU7-67P-201ENST00000459003 62 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 RNU7-80P-201ENST00000459562 61 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.47□□□□□ -2.17
MEIS3Q99687 COX6CP6-201ENST00000490840 228 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 MIR4713-201ENST00000582691 75 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 SNORD115-40-201ENST00000606510 82 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 MIR4791-201ENST00000607666 84 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 AL513423.1-201ENST00000621695 132 ntBASIC1.47□□□□□ -2.17
MEIS3Q99687 MIR302B-201ENST00000362188 73 ntBASIC1.46□□□□□ -2.18
MEIS3Q99687 RNU6-1107P-201ENST00000364817 104 ntBASIC1.46□□□□□ -2.18
MEIS3Q99687 Y_RNA.362-201ENST00000365518 110 ntBASIC1.46□□□□□ -2.18
MEIS3Q99687 RNU6-106P-201ENST00000384405 107 ntBASIC1.46□□□□□ -2.18
MEIS3Q99687 RNA5SP89-201ENST00000410300 108 ntBASIC1.46□□□□□ -2.18
MEIS3Q99687 RNA5SP144-201ENST00000410846 116 ntBASIC1.46□□□□□ -2.18
MEIS3Q99687 AL035398.1-201ENST00000430869 322 ntBASIC1.46□□□□□ -2.18
MEIS3Q99687 AC108729.3-201ENST00000513484 108 ntBASIC1.46□□□□□ -2.18
MEIS3Q99687 RNA5SP481-201ENST00000516814 122 ntBASIC1.46□□□□□ -2.18
MEIS3Q99687 AC022254.1-201ENST00000567857 235 ntBASIC1.46□□□□□ -2.18
MEIS3Q99687 AC021613.1-201ENST00000623880 111 ntBASIC1.46□□□□□ -2.18
MEIS3Q99687 Y_RNA.198-201ENST00000364013 98 ntBASIC1.45□□□□□ -2.18
MEIS3Q99687 SNORA19.1-201ENST00000410656 129 ntBASIC1.45□□□□□ -2.18
MEIS3Q99687 POLR2J4-204ENST00000418424 324 ntBASIC1.45□□□□□ -2.18
MEIS3Q99687 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.45□□□□□ -2.18
MEIS3Q99687 RNU7-96P-201ENST00000459535 64 ntBASIC1.45□□□□□ -2.18
MEIS3Q99687 RNU7-6P-201ENST00000516845 62 ntBASIC1.45□□□□□ -2.18
MEIS3Q99687 AC243994.1-201ENST00000618627 109 ntBASIC1.45□□□□□ -2.18
MEIS3Q99687 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
MEIS3Q99687 Y_RNA.85-201ENST00000363014 111 ntBASIC1.44□□□□□ -2.18
MEIS3Q99687 RNU6-392P-201ENST00000364926 101 ntBASIC1.44□□□□□ -2.18
MEIS3Q99687 Y_RNA.454-201ENST00000384224 113 ntBASIC1.44□□□□□ -2.18
MEIS3Q99687 Y_RNA.470-201ENST00000384307 117 ntBASIC1.44□□□□□ -2.18
MEIS3Q99687 RNU2-13P-201ENST00000515909 113 ntBASIC1.44□□□□□ -2.18
MEIS3Q99687 RNU6-168P-201ENST00000516189 101 ntBASIC1.44□□□□□ -2.18
MEIS3Q99687 AC004812.1-201ENST00000540773 146 ntBASIC1.44□□□□□ -2.18
MEIS3Q99687 Y_RNA.281-201ENST00000364774 94 ntBASIC1.43□□□□□ -2.18
MEIS3Q99687 RNA5SP259-201ENST00000365541 109 ntBASIC1.43□□□□□ -2.18
MEIS3Q99687 SNORA51.10-201ENST00000384418 136 ntBASIC1.43□□□□□ -2.18
MEIS3Q99687 MIR194-1-201ENST00000384892 85 ntBASIC1.43□□□□□ -2.18
MEIS3Q99687 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
MEIS3Q99687 SNORA26.6-201ENST00000391256 115 ntBASIC1.43□□□□□ -2.18
MEIS3Q99687 AC090844.1-201ENST00000422019 156 ntBASIC1.43□□□□□ -2.18
MEIS3Q99687 MIR1270-201ENST00000459320 83 ntBASIC1.43□□□□□ -2.18
MEIS3Q99687 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.43□□□□□ -2.18
MEIS3Q99687 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.43□□□□□ -2.18
MEIS3Q99687 Y_RNA.773-201ENST00000607168 90 ntBASIC1.43□□□□□ -2.18
MEIS3Q99687 MIR1255B1-201ENST00000636325 63 ntBASIC1.43□□□□□ -2.18
MEIS3Q99687 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
MEIS3Q99687 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.42□□□□□ -2.18
MEIS3Q99687 Y_RNA.213-201ENST00000364178 111 ntBASIC1.42□□□□□ -2.18
MEIS3Q99687 RNU6-1014P-201ENST00000383940 103 ntBASIC1.42□□□□□ -2.18
MEIS3Q99687 AL031737.1-201ENST00000450125 223 ntBASIC1.42□□□□□ -2.18
MEIS3Q99687 RPL39P34-201ENST00000477141 156 ntBASIC1.42□□□□□ -2.18
MEIS3Q99687 RNU7-41P-201ENST00000515917 61 ntBASIC1.42□□□□□ -2.18
MEIS3Q99687 RNU6-1053P-201ENST00000515930 101 ntBASIC1.42□□□□□ -2.18
MEIS3Q99687 RNU6-109P-201ENST00000516364 107 ntBASIC1.42□□□□□ -2.18
MEIS3Q99687 RNU6-184P-201ENST00000516514 107 ntBASIC1.42□□□□□ -2.18
MEIS3Q99687 RNU6-922P-201ENST00000516753 99 ntBASIC1.42□□□□□ -2.18
MEIS3Q99687 MIR4679-2-201ENST00000578358 77 ntBASIC1.42□□□□□ -2.18
MEIS3Q99687 MIR6078-201ENST00000611069 100 ntBASIC1.42□□□□□ -2.18
MEIS3Q99687 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.42□□□□□ -2.18
MEIS3Q99687 AC087741.2-201ENST00000619415 172 ntBASIC1.42□□□□□ -2.18
MEIS3Q99687 WWP1P1-201ENST00000466609 2769 ntBASIC1.41□□□□□ -2.18
MEIS3Q99687 SNORA32-201ENST00000384072 121 ntBASIC1.41□□□□□ -2.18
MEIS3Q99687 Y_RNA.495-201ENST00000384435 112 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms