Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 SNORD53B-201ENST00000577887 78 ntBASIC1.68□□□□□ -2.14
PNKPQ96T60 MIR6129-201ENST00000616087 109 ntBASIC1.68□□□□□ -2.14
PNKPQ96T60 RNU6-1325P-201ENST00000364905 105 ntBASIC1.67□□□□□ -2.14
PNKPQ96T60 Y_RNA.298-201ENST00000364960 107 ntBASIC1.67□□□□□ -2.14
PNKPQ96T60 RNU6-429P-201ENST00000384582 108 ntBASIC1.67□□□□□ -2.14
PNKPQ96T60 RNA5SP136-201ENST00000410906 107 ntBASIC1.67□□□□□ -2.14
PNKPQ96T60 RNU7-73P-201ENST00000458743 63 ntBASIC1.67□□□□□ -2.14
PNKPQ96T60 DNAJC19P9-201ENST00000555084 351 ntBASIC1.67□□□□□ -2.14
PNKPQ96T60 AL513534.2-201ENST00000603836 250 ntBASIC1.67□□□□□ -2.14
PNKPQ96T60 AL512598.1-201ENST00000610158 273 ntBASIC1.67□□□□□ -2.14
PNKPQ96T60 MIR302D-201ENST00000362275 68 ntBASIC1.66□□□□□ -2.14
PNKPQ96T60 RNU6-834P-201ENST00000362367 110 ntBASIC1.66□□□□□ -2.14
PNKPQ96T60 SNORD1A-201ENST00000364968 72 ntBASIC1.66□□□□□ -2.14
PNKPQ96T60 RNU6-1144P-201ENST00000384247 104 ntBASIC1.66□□□□□ -2.14
PNKPQ96T60 RNU6-997P-201ENST00000384725 107 ntBASIC1.66□□□□□ -2.14
PNKPQ96T60 MIR548A1-201ENST00000385041 97 ntBASIC1.66□□□□□ -2.14
PNKPQ96T60 MIR548A3-201ENST00000385297 97 ntBASIC1.66□□□□□ -2.14
PNKPQ96T60 SNORA26.6-201ENST00000391256 115 ntBASIC1.66□□□□□ -2.14
PNKPQ96T60 HMGN1P33-201ENST00000432945 451 ntBASIC1.66□□□□□ -2.14
PNKPQ96T60 SNORD111.1-201ENST00000516421 86 ntBASIC1.66□□□□□ -2.14
PNKPQ96T60 AC019176.1-201ENST00000518519 225 ntBASIC1.66□□□□□ -2.14
PNKPQ96T60 MIR4781-201ENST00000585250 76 ntBASIC1.66□□□□□ -2.14
PNKPQ96T60 AL670379.3-201ENST00000605040 251 ntBASIC1.66□□□□□ -2.14
PNKPQ96T60 AL020996.3-201ENST00000606617 222 ntBASIC1.66□□□□□ -2.14
PNKPQ96T60 AL121890.5-201ENST00000620848 304 ntBASIC1.66□□□□□ -2.14
PNKPQ96T60 RNU6-215P-201ENST00000365169 102 ntBASIC1.65□□□□□ -2.15
PNKPQ96T60 RNU6-1104P-201ENST00000384723 104 ntBASIC1.65□□□□□ -2.15
PNKPQ96T60 RNU6-1319P-201ENST00000390855 104 ntBASIC1.65□□□□□ -2.15
PNKPQ96T60 RNU6-747P-201ENST00000390928 104 ntBASIC1.65□□□□□ -2.15
PNKPQ96T60 RNU6-241P-201ENST00000391148 104 ntBASIC1.65□□□□□ -2.15
PNKPQ96T60 RNA5SP144-201ENST00000410846 116 ntBASIC1.65□□□□□ -2.15
PNKPQ96T60 RNA5SP247-201ENST00000411181 105 ntBASIC1.65□□□□□ -2.15
PNKPQ96T60 RNU6-177P-201ENST00000411257 104 ntBASIC1.65□□□□□ -2.15
PNKPQ96T60 POLR2J4-204ENST00000418424 324 ntBASIC1.65□□□□□ -2.15
PNKPQ96T60 Y_RNA.649-201ENST00000459077 103 ntBASIC1.65□□□□□ -2.15
PNKPQ96T60 AC022523.2-201ENST00000561045 150 ntBASIC1.65□□□□□ -2.15
PNKPQ96T60 MIR3192-201ENST00000584920 77 ntBASIC1.65□□□□□ -2.15
PNKPQ96T60 WWP1P1-201ENST00000466609 2769 ntBASIC1.64□□□□□ -2.15
PNKPQ96T60 RNU6-60P-201ENST00000364792 103 ntBASIC1.64□□□□□ -2.15
PNKPQ96T60 MT-TI-201ENST00000387365 69 ntBASIC1.64□□□□□ -2.15
PNKPQ96T60 RNU6-321P-201ENST00000410912 106 ntBASIC1.64□□□□□ -2.15
PNKPQ96T60 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.64□□□□□ -2.15
PNKPQ96T60 AL512326.2-201ENST00000426359 151 ntBASIC1.64□□□□□ -2.15
PNKPQ96T60 RNU7-95P-201ENST00000459222 64 ntBASIC1.64□□□□□ -2.15
PNKPQ96T60 snoU13.16-201ENST00000459350 104 ntBASIC1.64□□□□□ -2.15
PNKPQ96T60 COX6CP6-201ENST00000490840 228 ntBASIC1.64□□□□□ -2.15
PNKPQ96T60 RNU6-947P-201ENST00000516264 106 ntBASIC1.64□□□□□ -2.15
PNKPQ96T60 RNA5SP61-201ENST00000516453 100 ntBASIC1.64□□□□□ -2.15
PNKPQ96T60 RNU6-1258P-201ENST00000516911 111 ntBASIC1.64□□□□□ -2.15
PNKPQ96T60 SNORA44.1-201ENST00000517031 108 ntBASIC1.64□□□□□ -2.15
PNKPQ96T60 MIR548AO-201ENST00000579992 96 ntBASIC1.64□□□□□ -2.15
PNKPQ96T60 AL096861.1-201ENST00000610899 123 ntBASIC1.64□□□□□ -2.15
PNKPQ96T60 GHRLOS.1-201ENST00000610995 70 ntBASIC1.64□□□□□ -2.15
PNKPQ96T60 MIR6717-201ENST00000622747 73 ntBASIC1.64□□□□□ -2.15
PNKPQ96T60 MIR4251-201ENST00000635819 61 ntBASIC1.64□□□□□ -2.15
PNKPQ96T60 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
PNKPQ96T60 MIR337-201ENST00000362281 93 ntBASIC1.63□□□□□ -2.15
PNKPQ96T60 RNU1-42P-201ENST00000364033 160 ntBASIC1.63□□□□□ -2.15
PNKPQ96T60 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.63□□□□□ -2.15
PNKPQ96T60 MIR3152-201ENST00000579801 74 ntBASIC1.63□□□□□ -2.15
PNKPQ96T60 AL645939.4-201ENST00000604495 135 ntBASIC1.63□□□□□ -2.15
PNKPQ96T60 AL359821.1-201ENST00000605519 182 ntBASIC1.63□□□□□ -2.15
PNKPQ96T60 MIR8055-201ENST00000610739 97 ntBASIC1.63□□□□□ -2.15
PNKPQ96T60 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.63□□□□□ -2.15
PNKPQ96T60 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
PNKPQ96T60 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
PNKPQ96T60 Y_RNA.171-201ENST00000363760 102 ntBASIC1.62□□□□□ -2.15
PNKPQ96T60 Y_RNA.198-201ENST00000364013 98 ntBASIC1.62□□□□□ -2.15
PNKPQ96T60 SNORA67.6-201ENST00000391093 99 ntBASIC1.62□□□□□ -2.15
PNKPQ96T60 AL022718.1-201ENST00000412004 84 ntBASIC1.62□□□□□ -2.15
PNKPQ96T60 AC079140.2-201ENST00000506193 142 ntBASIC1.62□□□□□ -2.15
PNKPQ96T60 TRMT112P2-201ENST00000512910 132 ntBASIC1.62□□□□□ -2.15
PNKPQ96T60 AC004812.1-201ENST00000540773 146 ntBASIC1.62□□□□□ -2.15
PNKPQ96T60 SNORA22.1-201ENST00000362701 134 ntBASIC1.61□□□□□ -2.15
PNKPQ96T60 SNORD116-21-201ENST00000384507 92 ntBASIC1.61□□□□□ -2.15
PNKPQ96T60 MIR517C-201ENST00000385103 95 ntBASIC1.61□□□□□ -2.15
PNKPQ96T60 AC009474.2-201ENST00000451383 136 ntBASIC1.61□□□□□ -2.15
PNKPQ96T60 AL357312.1-201ENST00000603879 298 ntBASIC1.61□□□□□ -2.15
PNKPQ96T60 BX248123.2-201ENST00000606318 124 ntBASIC1.61□□□□□ -2.15
PNKPQ96T60 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
PNKPQ96T60 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
PNKPQ96T60 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.61□□□□□ -2.15
PNKPQ96T60 MIR6841-201ENST00000637129 72 ntBASIC1.61□□□□□ -2.15
PNKPQ96T60 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.6□□□□□ -2.15
PNKPQ96T60 Y_RNA.35-201ENST00000362601 101 ntBASIC1.6□□□□□ -2.15
PNKPQ96T60 SNORA1.1-201ENST00000364671 133 ntBASIC1.6□□□□□ -2.15
PNKPQ96T60 RNU6-44P-201ENST00000384045 107 ntBASIC1.6□□□□□ -2.15
PNKPQ96T60 RNA5SP261-201ENST00000410536 106 ntBASIC1.6□□□□□ -2.15
PNKPQ96T60 AL035461.1-201ENST00000421490 332 ntBASIC1.6□□□□□ -2.15
PNKPQ96T60 AC090844.1-201ENST00000422019 156 ntBASIC1.6□□□□□ -2.15
PNKPQ96T60 snoU13.25-201ENST00000458945 104 ntBASIC1.6□□□□□ -2.15
PNKPQ96T60 RNU6-919P-201ENST00000516731 104 ntBASIC1.6□□□□□ -2.15
PNKPQ96T60 MIR3937-201ENST00000580135 106 ntBASIC1.6□□□□□ -2.15
PNKPQ96T60 MIR7974-201ENST00000615835 79 ntBASIC1.6□□□□□ -2.15
PNKPQ96T60 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.6□□□□□ -2.15
PNKPQ96T60 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
PNKPQ96T60 SNORA25.3-201ENST00000363205 127 ntBASIC1.59□□□□□ -2.15
PNKPQ96T60 RNY1P10-201ENST00000363268 113 ntBASIC1.59□□□□□ -2.15
PNKPQ96T60 Y_RNA.213-201ENST00000364178 111 ntBASIC1.59□□□□□ -2.15
PNKPQ96T60 Y_RNA.531-201ENST00000384589 121 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 1570.4 ms