Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.1□□□□□ -2.07
CDK5RAP1Q96SZ6 Y_RNA.95-201ENST00000363079 95 ntBASIC2.09□□□□□ -2.07
CDK5RAP1Q96SZ6 Y_RNA.191-201ENST00000363972 113 ntBASIC2.09□□□□□ -2.07
CDK5RAP1Q96SZ6 RNU6-813P-201ENST00000384691 107 ntBASIC2.09□□□□□ -2.07
CDK5RAP1Q96SZ6 RNU6-913P-201ENST00000390913 95 ntBASIC2.09□□□□□ -2.07
CDK5RAP1Q96SZ6 SNORA26.6-201ENST00000391256 115 ntBASIC2.09□□□□□ -2.07
CDK5RAP1Q96SZ6 AC096949.1-201ENST00000412047 152 ntBASIC2.09□□□□□ -2.07
CDK5RAP1Q96SZ6 HMGN1P33-201ENST00000432945 451 ntBASIC2.09□□□□□ -2.07
CDK5RAP1Q96SZ6 RNU1-40P-201ENST00000516816 164 ntBASIC2.09□□□□□ -2.07
CDK5RAP1Q96SZ6 RNU1-97P-201ENST00000516872 164 ntBASIC2.09□□□□□ -2.07
CDK5RAP1Q96SZ6 AL096840.1-201ENST00000603287 93 ntBASIC2.09□□□□□ -2.07
CDK5RAP1Q96SZ6 MIR376B-201ENST00000614515 100 ntBASIC2.09□□□□□ -2.07
CDK5RAP1Q96SZ6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CDK5RAP1Q96SZ6 Y_RNA.10-201ENST00000362371 110 ntBASIC2.08□□□□□ -2.08
CDK5RAP1Q96SZ6 SNORA22.1-201ENST00000362701 134 ntBASIC2.08□□□□□ -2.08
CDK5RAP1Q96SZ6 RNU6-979P-201ENST00000383896 107 ntBASIC2.08□□□□□ -2.08
CDK5RAP1Q96SZ6 RNU6-675P-201ENST00000384236 104 ntBASIC2.08□□□□□ -2.08
CDK5RAP1Q96SZ6 MIR504-201ENST00000385065 83 ntBASIC2.08□□□□□ -2.08
CDK5RAP1Q96SZ6 UBL5P1-201ENST00000507979 193 ntBASIC2.08□□□□□ -2.08
CDK5RAP1Q96SZ6 RNA5SP182-201ENST00000516064 82 ntBASIC2.08□□□□□ -2.08
CDK5RAP1Q96SZ6 RNU7-28P-201ENST00000516759 62 ntBASIC2.08□□□□□ -2.08
CDK5RAP1Q96SZ6 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.08□□□□□ -2.08
CDK5RAP1Q96SZ6 MIR5588-201ENST00000581890 63 ntBASIC2.08□□□□□ -2.08
CDK5RAP1Q96SZ6 Y_RNA.783-201ENST00000613546 102 ntBASIC2.08□□□□□ -2.08
CDK5RAP1Q96SZ6 AC025521.1-201ENST00000621624 286 ntBASIC2.08□□□□□ -2.08
CDK5RAP1Q96SZ6 AL442644.1-201ENST00000454390 3105 ntBASIC2.08□□□□□ -2.08
CDK5RAP1Q96SZ6 AL359851.1-201ENST00000569460 4997 ntBASIC2.08□□□□□ -2.08
CDK5RAP1Q96SZ6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CDK5RAP1Q96SZ6 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
CDK5RAP1Q96SZ6 Y_RNA.437-201ENST00000384113 113 ntBASIC2.07□□□□□ -2.08
CDK5RAP1Q96SZ6 RNU6-424P-201ENST00000384367 105 ntBASIC2.07□□□□□ -2.08
CDK5RAP1Q96SZ6 SNORA18-201ENST00000384416 132 ntBASIC2.07□□□□□ -2.08
CDK5RAP1Q96SZ6 RNY1P4-201ENST00000384595 115 ntBASIC2.07□□□□□ -2.08
CDK5RAP1Q96SZ6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.07□□□□□ -2.08
CDK5RAP1Q96SZ6 HMGN2P3-201ENST00000433603 273 ntBASIC2.07□□□□□ -2.08
CDK5RAP1Q96SZ6 HMGN2P5-201ENST00000436882 273 ntBASIC2.07□□□□□ -2.08
CDK5RAP1Q96SZ6 RPL23AP42-201ENST00000471152 471 ntBASIC2.07□□□□□ -2.08
CDK5RAP1Q96SZ6 RNU7-12P-201ENST00000516030 62 ntBASIC2.07□□□□□ -2.08
CDK5RAP1Q96SZ6 AC104984.5-201ENST00000586878 94 ntBASIC2.07□□□□□ -2.08
CDK5RAP1Q96SZ6 SEPT14P17-201ENST00000617978 177 ntBASIC2.07□□□□□ -2.08
CDK5RAP1Q96SZ6 MIR6841-201ENST00000637129 72 ntBASIC2.07□□□□□ -2.08
CDK5RAP1Q96SZ6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.07□□□□□ -2.08
CDK5RAP1Q96SZ6 MIR526A1-201ENST00000384897 85 ntBASIC2.06□□□□□ -2.08
CDK5RAP1Q96SZ6 RNU6-1319P-201ENST00000390855 104 ntBASIC2.06□□□□□ -2.08
CDK5RAP1Q96SZ6 RNU6-747P-201ENST00000390928 104 ntBASIC2.06□□□□□ -2.08
CDK5RAP1Q96SZ6 RNU6-241P-201ENST00000391148 104 ntBASIC2.06□□□□□ -2.08
CDK5RAP1Q96SZ6 RNA5SP338-201ENST00000410495 85 ntBASIC2.06□□□□□ -2.08
CDK5RAP1Q96SZ6 RNU6-177P-201ENST00000411257 104 ntBASIC2.06□□□□□ -2.08
CDK5RAP1Q96SZ6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.06□□□□□ -2.08
CDK5RAP1Q96SZ6 RNU7-67P-201ENST00000459003 62 ntBASIC2.06□□□□□ -2.08
CDK5RAP1Q96SZ6 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.06□□□□□ -2.08
CDK5RAP1Q96SZ6 MIR4287-201ENST00000579398 78 ntBASIC2.06□□□□□ -2.08
CDK5RAP1Q96SZ6 AC027279.3-201ENST00000625055 122 ntBASIC2.06□□□□□ -2.08
CDK5RAP1Q96SZ6 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.06□□□□□ -2.08
CDK5RAP1Q96SZ6 MIR3202-2-201ENST00000635980 79 ntBASIC2.06□□□□□ -2.08
CDK5RAP1Q96SZ6 AL512310.12-203ENST00000640543 90 ntBASIC2.06□□□□□ -2.08
CDK5RAP1Q96SZ6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CDK5RAP1Q96SZ6 SNORD45B-201ENST00000364617 72 ntBASIC2.05□□□□□ -2.08
CDK5RAP1Q96SZ6 Y_RNA.370-201ENST00000365589 108 ntBASIC2.05□□□□□ -2.08
CDK5RAP1Q96SZ6 RNU6-242P-201ENST00000384359 107 ntBASIC2.05□□□□□ -2.08
CDK5RAP1Q96SZ6 RNU6-342P-201ENST00000384521 104 ntBASIC2.05□□□□□ -2.08
CDK5RAP1Q96SZ6 RNU6-887P-201ENST00000410660 100 ntBASIC2.05□□□□□ -2.08
CDK5RAP1Q96SZ6 RNU6-717P-201ENST00000459076 104 ntBASIC2.05□□□□□ -2.08
CDK5RAP1Q96SZ6 RNVU1-2-201ENST00000516326 135 ntBASIC2.05□□□□□ -2.08
CDK5RAP1Q96SZ6 MIR548AR-201ENST00000582191 57 ntBASIC2.05□□□□□ -2.08
CDK5RAP1Q96SZ6 MIR4668-201ENST00000582284 70 ntBASIC2.05□□□□□ -2.08
CDK5RAP1Q96SZ6 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.04□□□□□ -2.08
CDK5RAP1Q96SZ6 SNORD115-2-201ENST00000362842 82 ntBASIC2.04□□□□□ -2.08
CDK5RAP1Q96SZ6 SNORD115-20-201ENST00000365099 82 ntBASIC2.04□□□□□ -2.08
CDK5RAP1Q96SZ6 SNORD116-22-201ENST00000384430 92 ntBASIC2.04□□□□□ -2.08
CDK5RAP1Q96SZ6 HMGN2P39-201ENST00000398005 273 ntBASIC2.04□□□□□ -2.08
CDK5RAP1Q96SZ6 Y_RNA.620-201ENST00000411009 88 ntBASIC2.04□□□□□ -2.08
CDK5RAP1Q96SZ6 RNU6-65P-201ENST00000516332 98 ntBASIC2.04□□□□□ -2.08
CDK5RAP1Q96SZ6 RNA5SP437-201ENST00000517249 129 ntBASIC2.04□□□□□ -2.08
CDK5RAP1Q96SZ6 AC069114.2-201ENST00000604699 304 ntBASIC2.04□□□□□ -2.08
CDK5RAP1Q96SZ6 RNU6-86P-201ENST00000606534 107 ntBASIC2.04□□□□□ -2.08
CDK5RAP1Q96SZ6 uc_338.20-201ENST00000621563 178 ntBASIC2.04□□□□□ -2.08
CDK5RAP1Q96SZ6 MIR6717-201ENST00000622747 73 ntBASIC2.04□□□□□ -2.08
CDK5RAP1Q96SZ6 RNU1-58P-201ENST00000362413 163 ntBASIC2.03□□□□□ -2.08
CDK5RAP1Q96SZ6 RNU6-833P-201ENST00000363486 107 ntBASIC2.03□□□□□ -2.08
CDK5RAP1Q96SZ6 RNU6-1019P-201ENST00000364424 107 ntBASIC2.03□□□□□ -2.08
CDK5RAP1Q96SZ6 MIR583-201ENST00000384846 75 ntBASIC2.03□□□□□ -2.08
CDK5RAP1Q96SZ6 U8.15-201ENST00000390947 134 ntBASIC2.03□□□□□ -2.08
CDK5RAP1Q96SZ6 AC090844.1-201ENST00000422019 156 ntBASIC2.03□□□□□ -2.08
CDK5RAP1Q96SZ6 Y_RNA.705-201ENST00000516862 110 ntBASIC2.03□□□□□ -2.08
CDK5RAP1Q96SZ6 RNA5SP364-201ENST00000516938 78 ntBASIC2.03□□□□□ -2.08
CDK5RAP1Q96SZ6 MIR5089-201ENST00000580047 84 ntBASIC2.03□□□□□ -2.08
CDK5RAP1Q96SZ6 AC020891.4-201ENST00000605745 93 ntBASIC2.03□□□□□ -2.08
CDK5RAP1Q96SZ6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.03□□□□□ -2.08
CDK5RAP1Q96SZ6 AC103810.7-201ENST00000607821 91 ntBASIC2.03□□□□□ -2.08
CDK5RAP1Q96SZ6 MIR6715A-201ENST00000615929 79 ntBASIC2.03□□□□□ -2.08
CDK5RAP1Q96SZ6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
CDK5RAP1Q96SZ6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CDK5RAP1Q96SZ6 Y_RNA.4-201ENST00000362333 112 ntBASIC2.02□□□□□ -2.09
CDK5RAP1Q96SZ6 RNU6-1313P-201ENST00000362622 102 ntBASIC2.02□□□□□ -2.09
CDK5RAP1Q96SZ6 Y_RNA.299-201ENST00000364973 94 ntBASIC2.02□□□□□ -2.09
CDK5RAP1Q96SZ6 Y_RNA.377-201ENST00000365644 108 ntBASIC2.02□□□□□ -2.09
CDK5RAP1Q96SZ6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CDK5RAP1Q96SZ6 Y_RNA.611-201ENST00000410682 108 ntBASIC2.02□□□□□ -2.09
CDK5RAP1Q96SZ6 RNU2-40P-201ENST00000410833 196 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms