Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.27□□□□□ -2.61
AP1S3Q96PC3 MIR635-201ENST00000384830 98 ntBASIC-1.27□□□□□ -2.61
AP1S3Q96PC3 MTND1P14-201ENST00000427400 950 ntBASIC-1.27□□□□□ -2.61
AP1S3Q96PC3 SPINT5P-201ENST00000448174 155 ntBASIC-1.27□□□□□ -2.61
AP1S3Q96PC3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.27□□□□□ -2.61
AP1S3Q96PC3 RNU7-55P-201ENST00000459426 62 ntBASIC-1.27□□□□□ -2.61
AP1S3Q96PC3 MTND3P3-201ENST00000505004 126 ntBASIC-1.27□□□□□ -2.61
AP1S3Q96PC3 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.27□□□□□ -2.61
AP1S3Q96PC3 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.27□□□□□ -2.61
AP1S3Q96PC3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.27□□□□□ -2.61
AP1S3Q96PC3 MIR3179-1-201ENST00000578940 84 ntBASIC-1.27□□□□□ -2.61
AP1S3Q96PC3 MIR3179-2-201ENST00000579107 84 ntBASIC-1.27□□□□□ -2.61
AP1S3Q96PC3 MIR3179-3-201ENST00000579566 84 ntBASIC-1.27□□□□□ -2.61
AP1S3Q96PC3 AC011603.4-201ENST00000611325 277 ntBASIC-1.27□□□□□ -2.61
AP1S3Q96PC3 MIR3179-4-201ENST00000617599 84 ntBASIC-1.27□□□□□ -2.61
AP1S3Q96PC3 AL603755.1-201ENST00000619504 163 ntBASIC-1.27□□□□□ -2.61
AP1S3Q96PC3 U6.92-201ENST00000636464 89 ntBASIC-1.27□□□□□ -2.61
AP1S3Q96PC3 AC024614.3-201ENST00000637860 256 ntBASIC-1.27□□□□□ -2.61
AP1S3Q96PC3 Y_RNA.77-201ENST00000362962 107 ntBASIC-1.28□□□□□ -2.61
AP1S3Q96PC3 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.28□□□□□ -2.61
AP1S3Q96PC3 SNORA49-201ENST00000386157 136 ntBASIC-1.28□□□□□ -2.61
AP1S3Q96PC3 MTATP6P23-201ENST00000440153 476 ntBASIC-1.28□□□□□ -2.61
AP1S3Q96PC3 AC097635.1-201ENST00000450678 155 ntBASIC-1.28□□□□□ -2.61
AP1S3Q96PC3 MTND3P10-201ENST00000450967 341 ntBASIC-1.28□□□□□ -2.61
AP1S3Q96PC3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-1.28□□□□□ -2.61
AP1S3Q96PC3 AC019235.1-201ENST00000503847 207 ntBASIC-1.28□□□□□ -2.61
AP1S3Q96PC3 MTCO2P24-201ENST00000515611 426 ntBASIC-1.28□□□□□ -2.61
AP1S3Q96PC3 RNU7-13P-201ENST00000516413 62 ntBASIC-1.28□□□□□ -2.61
AP1S3Q96PC3 AL359881.1-201ENST00000602916 267 ntBASIC-1.28□□□□□ -2.61
AP1S3Q96PC3 AC124864.2-201ENST00000624736 186 ntBASIC-1.28□□□□□ -2.61
AP1S3Q96PC3 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.29□□□□□ -2.62
AP1S3Q96PC3 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.29□□□□□ -2.62
AP1S3Q96PC3 RNU6-429P-201ENST00000384582 108 ntBASIC-1.29□□□□□ -2.62
AP1S3Q96PC3 SNORA20-201ENST00000384662 132 ntBASIC-1.29□□□□□ -2.62
AP1S3Q96PC3 RNU7-169P-201ENST00000459456 61 ntBASIC-1.29□□□□□ -2.62
AP1S3Q96PC3 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.29□□□□□ -2.62
AP1S3Q96PC3 Y_RNA.682-201ENST00000516457 100 ntBASIC-1.29□□□□□ -2.62
AP1S3Q96PC3 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.29□□□□□ -2.62
AP1S3Q96PC3 RNU6-1314P-201ENST00000517139 104 ntBASIC-1.29□□□□□ -2.62
AP1S3Q96PC3 NBR2-204ENST00000587322 63 ntBASIC-1.29□□□□□ -2.62
AP1S3Q96PC3 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.3□□□□□ -2.62
AP1S3Q96PC3 RNU6-899P-201ENST00000363947 107 ntBASIC-1.3□□□□□ -2.62
AP1S3Q96PC3 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.3□□□□□ -2.62
AP1S3Q96PC3 RNU6-144P-201ENST00000383951 107 ntBASIC-1.3□□□□□ -2.62
AP1S3Q96PC3 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.3□□□□□ -2.62
AP1S3Q96PC3 MIR517B-201ENST00000385102 67 ntBASIC-1.3□□□□□ -2.62
AP1S3Q96PC3 RNU6-763P-201ENST00000390865 106 ntBASIC-1.3□□□□□ -2.62
AP1S3Q96PC3 RNU7-74P-201ENST00000459104 62 ntBASIC-1.3□□□□□ -2.62
AP1S3Q96PC3 SNORD22.1-201ENST00000516331 125 ntBASIC-1.3□□□□□ -2.62
AP1S3Q96PC3 RNU7-137P-201ENST00000516788 62 ntBASIC-1.3□□□□□ -2.62
AP1S3Q96PC3 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.3□□□□□ -2.62
AP1S3Q96PC3 AP003733.2-201ENST00000529409 171 ntBASIC-1.3□□□□□ -2.62
AP1S3Q96PC3 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.3□□□□□ -2.62
AP1S3Q96PC3 AC119751.7-201ENST00000600494 245 ntBASIC-1.3□□□□□ -2.62
AP1S3Q96PC3 MTND5P26-201ENST00000426018 1752 ntBASIC-1.3□□□□□ -2.62
AP1S3Q96PC3 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.31□□□□□ -2.62
AP1S3Q96PC3 MIR518B-201ENST00000385127 83 ntBASIC-1.31□□□□□ -2.62
AP1S3Q96PC3 SNORA13-201ENST00000458790 133 ntBASIC-1.31□□□□□ -2.62
AP1S3Q96PC3 RNU6-956P-201ENST00000458868 103 ntBASIC-1.31□□□□□ -2.62
AP1S3Q96PC3 RNU7-80P-201ENST00000459562 61 ntBASIC-1.31□□□□□ -2.62
AP1S3Q96PC3 SNORD67.1-201ENST00000516618 108 ntBASIC-1.31□□□□□ -2.62
AP1S3Q96PC3 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.31□□□□□ -2.62
AP1S3Q96PC3 MIR5704-201ENST00000584029 77 ntBASIC-1.31□□□□□ -2.62
AP1S3Q96PC3 MIR4499-201ENST00000584834 69 ntBASIC-1.31□□□□□ -2.62
AP1S3Q96PC3 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.32□□□□□ -2.62
AP1S3Q96PC3 RNA5SP25-201ENST00000410815 110 ntBASIC-1.32□□□□□ -2.62
AP1S3Q96PC3 RNU7-195P-201ENST00000458793 62 ntBASIC-1.32□□□□□ -2.62
AP1S3Q96PC3 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.32□□□□□ -2.62
AP1S3Q96PC3 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.33□□□□□ -2.62
AP1S3Q96PC3 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.33□□□□□ -2.62
AP1S3Q96PC3 RNU7-10P-201ENST00000607194 63 ntBASIC-1.33□□□□□ -2.62
AP1S3Q96PC3 uc_338.19-201ENST00000616808 99 ntBASIC-1.33□□□□□ -2.62
AP1S3Q96PC3 RNU6-502P-201ENST00000362419 108 ntBASIC-1.34□□□□□ -2.62
AP1S3Q96PC3 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.34□□□□□ -2.62
AP1S3Q96PC3 RNU4-16P-201ENST00000364737 141 ntBASIC-1.34□□□□□ -2.62
AP1S3Q96PC3 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.34□□□□□ -2.62
AP1S3Q96PC3 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.34□□□□□ -2.62
AP1S3Q96PC3 RNU6-524P-201ENST00000384270 107 ntBASIC-1.34□□□□□ -2.62
AP1S3Q96PC3 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.34□□□□□ -2.62
AP1S3Q96PC3 MIR617-201ENST00000385030 97 ntBASIC-1.34□□□□□ -2.62
AP1S3Q96PC3 DEFB108C-201ENST00000400154 252 ntBASIC-1.34□□□□□ -2.62
AP1S3Q96PC3 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.34□□□□□ -2.62
AP1S3Q96PC3 AC022137.1-201ENST00000483735 151 ntBASIC-1.34□□□□□ -2.62
AP1S3Q96PC3 RNU6-191P-201ENST00000516295 94 ntBASIC-1.34□□□□□ -2.62
AP1S3Q96PC3 RNU7-110P-201ENST00000516891 62 ntBASIC-1.34□□□□□ -2.62
AP1S3Q96PC3 MIR4460-201ENST00000577862 86 ntBASIC-1.34□□□□□ -2.62
AP1S3Q96PC3 MIR5197-201ENST00000583721 112 ntBASIC-1.34□□□□□ -2.62
AP1S3Q96PC3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.34□□□□□ -2.62
AP1S3Q96PC3 AC006504.6-201ENST00000590142 199 ntBASIC-1.34□□□□□ -2.62
AP1S3Q96PC3 RN7SKP299-201ENST00000606679 301 ntBASIC-1.34□□□□□ -2.62
AP1S3Q96PC3 AC098479.1-201ENST00000609225 154 ntBASIC-1.34□□□□□ -2.62
AP1S3Q96PC3 MIR8068-201ENST00000618032 68 ntBASIC-1.34□□□□□ -2.62
AP1S3Q96PC3 MIR20A-201ENST00000362279 71 ntBASIC-1.35□□□□□ -2.63
AP1S3Q96PC3 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.35□□□□□ -2.63
AP1S3Q96PC3 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.35□□□□□ -2.63
AP1S3Q96PC3 RNU6-431P-201ENST00000383874 107 ntBASIC-1.35□□□□□ -2.63
AP1S3Q96PC3 SNORA32-201ENST00000384072 121 ntBASIC-1.35□□□□□ -2.63
AP1S3Q96PC3 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.35□□□□□ -2.63
AP1S3Q96PC3 MIR652-201ENST00000385278 98 ntBASIC-1.35□□□□□ -2.63
AP1S3Q96PC3 SNORA53-201ENST00000391141 249 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms