Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 Y_RNA.757-201ENST00000578934 114 ntBASIC1.09□□□□□ -2.23
FOXN4Q96NZ1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.09□□□□□ -2.23
FOXN4Q96NZ1 AC108081.1-201ENST00000604358 221 ntBASIC1.09□□□□□ -2.23
FOXN4Q96NZ1 SNORD115-40-201ENST00000606510 82 ntBASIC1.09□□□□□ -2.23
FOXN4Q96NZ1 Y_RNA.261-201ENST00000364631 102 ntBASIC1.08□□□□□ -2.24
FOXN4Q96NZ1 RNU1-133P-201ENST00000364867 167 ntBASIC1.08□□□□□ -2.24
FOXN4Q96NZ1 SNORD113-1-201ENST00000365321 69 ntBASIC1.08□□□□□ -2.24
FOXN4Q96NZ1 RNU6-1117P-201ENST00000384525 104 ntBASIC1.08□□□□□ -2.24
FOXN4Q96NZ1 MIR520C-201ENST00000385005 87 ntBASIC1.08□□□□□ -2.24
FOXN4Q96NZ1 RNU7-107P-201ENST00000459121 61 ntBASIC1.08□□□□□ -2.24
FOXN4Q96NZ1 RNU7-45P-201ENST00000459460 63 ntBASIC1.08□□□□□ -2.24
FOXN4Q96NZ1 RPS29P24-201ENST00000486345 171 ntBASIC1.08□□□□□ -2.24
FOXN4Q96NZ1 AL133373.1-201ENST00000497098 94 ntBASIC1.08□□□□□ -2.24
FOXN4Q96NZ1 RNU6-322P-201ENST00000516010 103 ntBASIC1.08□□□□□ -2.24
FOXN4Q96NZ1 MIR4764-201ENST00000580680 88 ntBASIC1.08□□□□□ -2.24
FOXN4Q96NZ1 MIR4791-201ENST00000607666 84 ntBASIC1.08□□□□□ -2.24
FOXN4Q96NZ1 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.08□□□□□ -2.24
FOXN4Q96NZ1 AC091932.4-201ENST00000623386 200 ntBASIC1.08□□□□□ -2.24
FOXN4Q96NZ1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.07□□□□□ -2.24
FOXN4Q96NZ1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.07□□□□□ -2.24
FOXN4Q96NZ1 MIR302B-201ENST00000362188 73 ntBASIC1.07□□□□□ -2.24
FOXN4Q96NZ1 RNU4-16P-201ENST00000364737 141 ntBASIC1.07□□□□□ -2.24
FOXN4Q96NZ1 RNU6-22P-201ENST00000384355 107 ntBASIC1.07□□□□□ -2.24
FOXN4Q96NZ1 SNORD41-201ENST00000386967 70 ntBASIC1.07□□□□□ -2.24
FOXN4Q96NZ1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.07□□□□□ -2.24
FOXN4Q96NZ1 AL035398.1-201ENST00000430869 322 ntBASIC1.07□□□□□ -2.24
FOXN4Q96NZ1 RNU7-80P-201ENST00000459562 61 ntBASIC1.07□□□□□ -2.24
FOXN4Q96NZ1 RNU6-998P-201ENST00000515894 101 ntBASIC1.07□□□□□ -2.24
FOXN4Q96NZ1 SNORA31.4-201ENST00000516049 129 ntBASIC1.07□□□□□ -2.24
FOXN4Q96NZ1 RNU6-240P-201ENST00000516098 97 ntBASIC1.07□□□□□ -2.24
FOXN4Q96NZ1 RN7SKP179-201ENST00000516126 217 ntBASIC1.07□□□□□ -2.24
FOXN4Q96NZ1 RNU6-1333P-201ENST00000516162 93 ntBASIC1.07□□□□□ -2.24
FOXN4Q96NZ1 RNU6-947P-201ENST00000516264 106 ntBASIC1.07□□□□□ -2.24
FOXN4Q96NZ1 MIR3660-201ENST00000584845 100 ntBASIC1.07□□□□□ -2.24
FOXN4Q96NZ1 AC243994.1-201ENST00000618627 109 ntBASIC1.07□□□□□ -2.24
FOXN4Q96NZ1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.07□□□□□ -2.24
FOXN4Q96NZ1 Y_RNA.116-201ENST00000363292 103 ntBASIC1.06□□□□□ -2.24
FOXN4Q96NZ1 Y_RNA.191-201ENST00000363972 113 ntBASIC1.06□□□□□ -2.24
FOXN4Q96NZ1 Y_RNA.366-201ENST00000365540 102 ntBASIC1.06□□□□□ -2.24
FOXN4Q96NZ1 RNU6-80P-201ENST00000384195 107 ntBASIC1.06□□□□□ -2.24
FOXN4Q96NZ1 Y_RNA.508-201ENST00000384502 114 ntBASIC1.06□□□□□ -2.24
FOXN4Q96NZ1 MIR518E-201ENST00000385252 88 ntBASIC1.06□□□□□ -2.24
FOXN4Q96NZ1 AL158147.1-201ENST00000443970 75 ntBASIC1.06□□□□□ -2.24
FOXN4Q96NZ1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.06□□□□□ -2.24
FOXN4Q96NZ1 RNU7-96P-201ENST00000459535 64 ntBASIC1.06□□□□□ -2.24
FOXN4Q96NZ1 RNU2-13P-201ENST00000515909 113 ntBASIC1.06□□□□□ -2.24
FOXN4Q96NZ1 RNU7-41P-201ENST00000515917 61 ntBASIC1.06□□□□□ -2.24
FOXN4Q96NZ1 RNU6-1061P-201ENST00000516530 99 ntBASIC1.06□□□□□ -2.24
FOXN4Q96NZ1 RNU7-43P-201ENST00000516554 64 ntBASIC1.06□□□□□ -2.24
FOXN4Q96NZ1 IGKV1-22-201ENST00000524313 326 ntBASIC1.06□□□□□ -2.24
FOXN4Q96NZ1 CYP3A52P-201ENST00000563326 91 ntBASIC1.06□□□□□ -2.24
FOXN4Q96NZ1 MIR4452-201ENST00000583004 71 ntBASIC1.06□□□□□ -2.24
FOXN4Q96NZ1 MIR7111-201ENST00000619751 72 ntBASIC1.06□□□□□ -2.24
FOXN4Q96NZ1 MIR8065-201ENST00000620577 100 ntBASIC1.06□□□□□ -2.24
FOXN4Q96NZ1 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.06□□□□□ -2.24
FOXN4Q96NZ1 RNU6-349P-201ENST00000362402 107 ntBASIC1.05□□□□□ -2.24
FOXN4Q96NZ1 Y_RNA.127-201ENST00000363386 109 ntBASIC1.05□□□□□ -2.24
FOXN4Q96NZ1 RNU6-690P-201ENST00000365242 106 ntBASIC1.05□□□□□ -2.24
FOXN4Q96NZ1 SNORD116-14-201ENST00000383894 92 ntBASIC1.05□□□□□ -2.24
FOXN4Q96NZ1 SNORD116-17-201ENST00000383929 92 ntBASIC1.05□□□□□ -2.24
FOXN4Q96NZ1 RNY1P6-201ENST00000384193 109 ntBASIC1.05□□□□□ -2.24
FOXN4Q96NZ1 Y_RNA.454-201ENST00000384224 113 ntBASIC1.05□□□□□ -2.24
FOXN4Q96NZ1 SNORA51.10-201ENST00000384418 136 ntBASIC1.05□□□□□ -2.24
FOXN4Q96NZ1 SNORD116-15-201ENST00000384445 92 ntBASIC1.05□□□□□ -2.24
FOXN4Q96NZ1 SNORA22C-201ENST00000384614 134 ntBASIC1.05□□□□□ -2.24
FOXN4Q96NZ1 SNORD116-19-201ENST00000384729 92 ntBASIC1.05□□□□□ -2.24
FOXN4Q96NZ1 RNU6-913P-201ENST00000390913 95 ntBASIC1.05□□□□□ -2.24
FOXN4Q96NZ1 RNU6-1154P-201ENST00000391001 104 ntBASIC1.05□□□□□ -2.24
FOXN4Q96NZ1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.05□□□□□ -2.24
FOXN4Q96NZ1 RNU6-781P-201ENST00000516377 101 ntBASIC1.05□□□□□ -2.24
FOXN4Q96NZ1 SNORD111.1-201ENST00000516421 86 ntBASIC1.05□□□□□ -2.24
FOXN4Q96NZ1 RNU6-62P-201ENST00000516526 102 ntBASIC1.05□□□□□ -2.24
FOXN4Q96NZ1 AC133485.4-201ENST00000561835 220 ntBASIC1.05□□□□□ -2.24
FOXN4Q96NZ1 AC138907.4-201ENST00000570107 226 ntBASIC1.05□□□□□ -2.24
FOXN4Q96NZ1 AL513534.2-201ENST00000603836 250 ntBASIC1.05□□□□□ -2.24
FOXN4Q96NZ1 AC008133.2-201ENST00000624540 351 ntBASIC1.05□□□□□ -2.24
FOXN4Q96NZ1 Y_RNA.118-201ENST00000363300 101 ntBASIC1.04□□□□□ -2.24
FOXN4Q96NZ1 RNU6-647P-201ENST00000364243 107 ntBASIC1.04□□□□□ -2.24
FOXN4Q96NZ1 Y_RNA.280-201ENST00000364765 112 ntBASIC1.04□□□□□ -2.24
FOXN4Q96NZ1 SNORD114-22-201ENST00000365423 72 ntBASIC1.04□□□□□ -2.24
FOXN4Q96NZ1 SNORA70.7-201ENST00000384159 133 ntBASIC1.04□□□□□ -2.24
FOXN4Q96NZ1 Y_RNA.537-201ENST00000384626 109 ntBASIC1.04□□□□□ -2.24
FOXN4Q96NZ1 RNU6-1067P-201ENST00000384752 107 ntBASIC1.04□□□□□ -2.24
FOXN4Q96NZ1 MIR1263-201ENST00000408324 86 ntBASIC1.04□□□□□ -2.24
FOXN4Q96NZ1 MIR548I2-201ENST00000408348 149 ntBASIC1.04□□□□□ -2.24
FOXN4Q96NZ1 RNU6-1190P-201ENST00000410811 104 ntBASIC1.04□□□□□ -2.24
FOXN4Q96NZ1 Y_RNA.630-201ENST00000411370 108 ntBASIC1.04□□□□□ -2.24
FOXN4Q96NZ1 HMGN1P33-201ENST00000432945 451 ntBASIC1.04□□□□□ -2.24
FOXN4Q96NZ1 AC008267.6-201ENST00000441664 139 ntBASIC1.04□□□□□ -2.24
FOXN4Q96NZ1 RN7SKP19-201ENST00000516016 252 ntBASIC1.04□□□□□ -2.24
FOXN4Q96NZ1 RNU6-772P-201ENST00000516042 105 ntBASIC1.04□□□□□ -2.24
FOXN4Q96NZ1 MIR3192-201ENST00000584920 77 ntBASIC1.04□□□□□ -2.24
FOXN4Q96NZ1 AL096861.1-201ENST00000610899 123 ntBASIC1.04□□□□□ -2.24
FOXN4Q96NZ1 GHRLOS.1-201ENST00000610995 70 ntBASIC1.04□□□□□ -2.24
FOXN4Q96NZ1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
FOXN4Q96NZ1 SNORA25.3-201ENST00000363205 127 ntBASIC1.03□□□□□ -2.24
FOXN4Q96NZ1 SNORA24-201ENST00000384096 131 ntBASIC1.03□□□□□ -2.24
FOXN4Q96NZ1 RNU6-1168P-201ENST00000390831 104 ntBASIC1.03□□□□□ -2.24
FOXN4Q96NZ1 MIR1285-1-201ENST00000408593 84 ntBASIC1.03□□□□□ -2.24
FOXN4Q96NZ1 RNU2-51P-201ENST00000410708 197 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 259.8 ms