Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 RNU7-45P-201ENST00000459460 63 ntBASIC-0.08□□□□□ -2.42
PKNOX2Q96KN3 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.08□□□□□ -2.42
PKNOX2Q96KN3 AC090971.5-201ENST00000621102 293 ntBASIC-0.08□□□□□ -2.42
PKNOX2Q96KN3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
PKNOX2Q96KN3 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.09□□□□□ -2.42
PKNOX2Q96KN3 RNU6-403P-201ENST00000363163 104 ntBASIC-0.09□□□□□ -2.42
PKNOX2Q96KN3 RNU4-73P-201ENST00000363164 141 ntBASIC-0.09□□□□□ -2.42
PKNOX2Q96KN3 RNU6-484P-201ENST00000384016 107 ntBASIC-0.09□□□□□ -2.42
PKNOX2Q96KN3 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.09□□□□□ -2.42
PKNOX2Q96KN3 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.09□□□□□ -2.42
PKNOX2Q96KN3 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.09□□□□□ -2.42
PKNOX2Q96KN3 PCNPP3-201ENST00000393579 471 ntBASIC-0.09□□□□□ -2.42
PKNOX2Q96KN3 RNU6-848P-201ENST00000515948 107 ntBASIC-0.09□□□□□ -2.42
PKNOX2Q96KN3 RNU6-617P-201ENST00000516147 107 ntBASIC-0.09□□□□□ -2.42
PKNOX2Q96KN3 RNU6-473P-201ENST00000516164 107 ntBASIC-0.09□□□□□ -2.42
PKNOX2Q96KN3 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.09□□□□□ -2.42
PKNOX2Q96KN3 RNA5SP153-201ENST00000516498 76 ntBASIC-0.09□□□□□ -2.42
PKNOX2Q96KN3 SNORA31.14-201ENST00000516728 116 ntBASIC-0.09□□□□□ -2.42
PKNOX2Q96KN3 RNU6-765P-201ENST00000516916 99 ntBASIC-0.09□□□□□ -2.42
PKNOX2Q96KN3 MIR4290-201ENST00000583807 95 ntBASIC-0.09□□□□□ -2.42
PKNOX2Q96KN3 MIR2909-201ENST00000617113 69 ntBASIC-0.09□□□□□ -2.42
PKNOX2Q96KN3 RNA5SP257-201ENST00000363023 116 ntBASIC-0.1□□□□□ -2.43
PKNOX2Q96KN3 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.1□□□□□ -2.43
PKNOX2Q96KN3 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.1□□□□□ -2.43
PKNOX2Q96KN3 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.1□□□□□ -2.43
PKNOX2Q96KN3 MIR626-201ENST00000385032 94 ntBASIC-0.1□□□□□ -2.43
PKNOX2Q96KN3 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
PKNOX2Q96KN3 SUMO1P3-201ENST00000439961 304 ntBASIC-0.1□□□□□ -2.43
PKNOX2Q96KN3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.1□□□□□ -2.43
PKNOX2Q96KN3 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.1□□□□□ -2.43
PKNOX2Q96KN3 RNA5SP47-201ENST00000517230 109 ntBASIC-0.1□□□□□ -2.43
PKNOX2Q96KN3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.1□□□□□ -2.43
PKNOX2Q96KN3 AC097639.2-201ENST00000603159 172 ntBASIC-0.1□□□□□ -2.43
PKNOX2Q96KN3 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.11□□□□□ -2.43
PKNOX2Q96KN3 RNU6-450P-201ENST00000364654 107 ntBASIC-0.11□□□□□ -2.43
PKNOX2Q96KN3 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.11□□□□□ -2.43
PKNOX2Q96KN3 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.11□□□□□ -2.43
PKNOX2Q96KN3 RNU6-597P-201ENST00000365620 102 ntBASIC-0.11□□□□□ -2.43
PKNOX2Q96KN3 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.11□□□□□ -2.43
PKNOX2Q96KN3 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.11□□□□□ -2.43
PKNOX2Q96KN3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.11□□□□□ -2.43
PKNOX2Q96KN3 AC141846.1-201ENST00000568348 142 ntBASIC-0.11□□□□□ -2.43
PKNOX2Q96KN3 MIR4491-201ENST00000581087 68 ntBASIC-0.11□□□□□ -2.43
PKNOX2Q96KN3 AL133255.1-201ENST00000606374 441 ntBASIC-0.11□□□□□ -2.43
PKNOX2Q96KN3 AC091304.10-201ENST00000641554 121 ntBASIC-0.11□□□□□ -2.43
PKNOX2Q96KN3 UBE2WP1-201ENST00000362030 340 ntBASIC-0.12□□□□□ -2.43
PKNOX2Q96KN3 RNY3P5-201ENST00000384127 102 ntBASIC-0.12□□□□□ -2.43
PKNOX2Q96KN3 SNORD28-201ENST00000384706 75 ntBASIC-0.12□□□□□ -2.43
PKNOX2Q96KN3 RNU6-101P-201ENST00000410323 104 ntBASIC-0.12□□□□□ -2.43
PKNOX2Q96KN3 RNU7-80P-201ENST00000459562 61 ntBASIC-0.12□□□□□ -2.43
PKNOX2Q96KN3 TRBVB-201ENST00000477100 408 ntBASIC-0.12□□□□□ -2.43
PKNOX2Q96KN3 MTND3P22-201ENST00000510932 243 ntBASIC-0.12□□□□□ -2.43
PKNOX2Q96KN3 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.12□□□□□ -2.43
PKNOX2Q96KN3 MIR3152-201ENST00000579801 74 ntBASIC-0.12□□□□□ -2.43
PKNOX2Q96KN3 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.13□□□□□ -2.43
PKNOX2Q96KN3 SNORD114-5-201ENST00000362928 70 ntBASIC-0.13□□□□□ -2.43
PKNOX2Q96KN3 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.13□□□□□ -2.43
PKNOX2Q96KN3 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.13□□□□□ -2.43
PKNOX2Q96KN3 RNU6-211P-201ENST00000384047 107 ntBASIC-0.13□□□□□ -2.43
PKNOX2Q96KN3 SNORA1-201ENST00000384107 130 ntBASIC-0.13□□□□□ -2.43
PKNOX2Q96KN3 RNU6-187P-201ENST00000384139 106 ntBASIC-0.13□□□□□ -2.43
PKNOX2Q96KN3 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.13□□□□□ -2.43
PKNOX2Q96KN3 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.13□□□□□ -2.43
PKNOX2Q96KN3 MIR215-201ENST00000384858 110 ntBASIC-0.13□□□□□ -2.43
PKNOX2Q96KN3 MIR610-201ENST00000385139 96 ntBASIC-0.13□□□□□ -2.43
PKNOX2Q96KN3 RNU6-127P-201ENST00000390897 107 ntBASIC-0.13□□□□□ -2.43
PKNOX2Q96KN3 AC096949.1-201ENST00000412047 152 ntBASIC-0.13□□□□□ -2.43
PKNOX2Q96KN3 MTND5P20-201ENST00000448677 143 ntBASIC-0.13□□□□□ -2.43
PKNOX2Q96KN3 SNRPGP8-201ENST00000454064 226 ntBASIC-0.13□□□□□ -2.43
PKNOX2Q96KN3 SNORA40.15-201ENST00000516884 107 ntBASIC-0.13□□□□□ -2.43
PKNOX2Q96KN3 MIR4795-201ENST00000584182 89 ntBASIC-0.13□□□□□ -2.43
PKNOX2Q96KN3 MIR4639-201ENST00000584938 69 ntBASIC-0.13□□□□□ -2.43
PKNOX2Q96KN3 MIR376A2-201ENST00000636782 80 ntBASIC-0.13□□□□□ -2.43
PKNOX2Q96KN3 RNU6-770P-201ENST00000363929 105 ntBASIC-0.14□□□□□ -2.43
PKNOX2Q96KN3 RNU6-302P-201ENST00000365249 107 ntBASIC-0.14□□□□□ -2.43
PKNOX2Q96KN3 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.14□□□□□ -2.43
PKNOX2Q96KN3 RNU6-291P-201ENST00000384720 107 ntBASIC-0.14□□□□□ -2.43
PKNOX2Q96KN3 AC141557.1-201ENST00000540982 400 ntBASIC-0.14□□□□□ -2.43
PKNOX2Q96KN3 AC091932.4-201ENST00000623386 200 ntBASIC-0.14□□□□□ -2.43
PKNOX2Q96KN3 MIR369-201ENST00000362155 70 ntBASIC-0.15□□□□□ -2.43
PKNOX2Q96KN3 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.15□□□□□ -2.43
PKNOX2Q96KN3 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.15□□□□□ -2.43
PKNOX2Q96KN3 SNORD42.2-201ENST00000365570 69 ntBASIC-0.15□□□□□ -2.43
PKNOX2Q96KN3 RNU6-949P-201ENST00000384040 107 ntBASIC-0.15□□□□□ -2.43
PKNOX2Q96KN3 RNU6V-201ENST00000384105 107 ntBASIC-0.15□□□□□ -2.43
PKNOX2Q96KN3 SNORA72.6-201ENST00000384520 129 ntBASIC-0.15□□□□□ -2.43
PKNOX2Q96KN3 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.15□□□□□ -2.43
PKNOX2Q96KN3 MIR760-201ENST00000390220 80 ntBASIC-0.15□□□□□ -2.43
PKNOX2Q96KN3 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.15□□□□□ -2.43
PKNOX2Q96KN3 ELOCP20-201ENST00000422460 345 ntBASIC-0.15□□□□□ -2.43
PKNOX2Q96KN3 MIR5197-201ENST00000583721 112 ntBASIC-0.15□□□□□ -2.43
PKNOX2Q96KN3 AC067863.3-201ENST00000624172 122 ntBASIC-0.15□□□□□ -2.43
PKNOX2Q96KN3 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.16□□□□□ -2.44
PKNOX2Q96KN3 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.16□□□□□ -2.44
PKNOX2Q96KN3 SNORA32.1-201ENST00000364514 115 ntBASIC-0.16□□□□□ -2.44
PKNOX2Q96KN3 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.16□□□□□ -2.44
PKNOX2Q96KN3 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.16□□□□□ -2.44
PKNOX2Q96KN3 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.16□□□□□ -2.44
PKNOX2Q96KN3 RNU6-535P-201ENST00000384722 107 ntBASIC-0.16□□□□□ -2.44
PKNOX2Q96KN3 MT-TT-201ENST00000387460 66 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms