Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 SNORD115-4-201ENST00000363810 82 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 SNORD115-16-201ENST00000363887 82 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 SNORD115-6-201ENST00000363942 82 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 Y_RNA.198-201ENST00000364013 98 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 SNORD115-42-201ENST00000364273 82 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 Y_RNA.224-201ENST00000364308 111 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 SNORD115-15-201ENST00000364809 81 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 Y_RNA.298-201ENST00000364960 107 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 SNORD115-1-201ENST00000364961 82 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 SNORD115-26-201ENST00000365067 82 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 SNORD115-10-201ENST00000365073 81 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 SNORD115-43-201ENST00000365503 82 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 SNORD115-36-201ENST00000365629 82 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 Y_RNA.549-201ENST00000384657 102 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 MIR452-201ENST00000385020 85 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 MIR136-201ENST00000385207 82 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 SNORD12C-201ENST00000386307 89 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 MIR759-201ENST00000390224 91 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 AC107297.1-201ENST00000459991 176 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 RNU6-970P-201ENST00000516312 107 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 MIR4679-2-201ENST00000578358 77 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 MIR4305-201ENST00000583252 102 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 SNORD115-40-201ENST00000606510 82 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 uc_338.28-201ENST00000612082 187 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 SNORD3E-202ENST00000627253 216 ntBASIC1.62□□□□□ -2.15
VCPIP1Q96JH7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
VCPIP1Q96JH7 MIR450A1-201ENST00000362262 91 ntBASIC1.61□□□□□ -2.15
VCPIP1Q96JH7 SNORA63.5-201ENST00000363548 123 ntBASIC1.61□□□□□ -2.15
VCPIP1Q96JH7 Y_RNA.213-201ENST00000364178 111 ntBASIC1.61□□□□□ -2.15
VCPIP1Q96JH7 Y_RNA.281-201ENST00000364774 94 ntBASIC1.61□□□□□ -2.15
VCPIP1Q96JH7 RNU6-1107P-201ENST00000364817 104 ntBASIC1.61□□□□□ -2.15
VCPIP1Q96JH7 AC004965.1-201ENST00000413033 213 ntBASIC1.61□□□□□ -2.15
VCPIP1Q96JH7 PGBD4P5-201ENST00000445958 426 ntBASIC1.61□□□□□ -2.15
VCPIP1Q96JH7 AC009474.2-201ENST00000451383 136 ntBASIC1.61□□□□□ -2.15
VCPIP1Q96JH7 RPS29P24-201ENST00000486345 171 ntBASIC1.61□□□□□ -2.15
VCPIP1Q96JH7 RNU6-998P-201ENST00000515894 101 ntBASIC1.61□□□□□ -2.15
VCPIP1Q96JH7 RNU7-123P-201ENST00000515911 60 ntBASIC1.61□□□□□ -2.15
VCPIP1Q96JH7 AL513423.1-201ENST00000621695 132 ntBASIC1.61□□□□□ -2.15
VCPIP1Q96JH7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
VCPIP1Q96JH7 SNORA1.2-201ENST00000365189 134 ntBASIC1.6□□□□□ -2.15
VCPIP1Q96JH7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.6□□□□□ -2.15
VCPIP1Q96JH7 Y_RNA.370-201ENST00000365589 108 ntBASIC1.6□□□□□ -2.15
VCPIP1Q96JH7 RNU6-1104P-201ENST00000384723 104 ntBASIC1.6□□□□□ -2.15
VCPIP1Q96JH7 MIR660-201ENST00000385235 97 ntBASIC1.6□□□□□ -2.15
VCPIP1Q96JH7 MT-TI-201ENST00000387365 69 ntBASIC1.6□□□□□ -2.15
VCPIP1Q96JH7 AL035398.1-201ENST00000430869 322 ntBASIC1.6□□□□□ -2.15
VCPIP1Q96JH7 AL031737.1-201ENST00000450125 223 ntBASIC1.6□□□□□ -2.15
VCPIP1Q96JH7 RNU2-11P-201ENST00000459191 187 ntBASIC1.6□□□□□ -2.15
VCPIP1Q96JH7 snoU13.18-201ENST00000459483 104 ntBASIC1.6□□□□□ -2.15
VCPIP1Q96JH7 RNU7-96P-201ENST00000459535 64 ntBASIC1.6□□□□□ -2.15
VCPIP1Q96JH7 RNU2-35P-201ENST00000516446 142 ntBASIC1.6□□□□□ -2.15
VCPIP1Q96JH7 AC022523.2-201ENST00000561045 150 ntBASIC1.6□□□□□ -2.15
VCPIP1Q96JH7 SNORD53B-201ENST00000577887 78 ntBASIC1.6□□□□□ -2.15
VCPIP1Q96JH7 AL035470.1-201ENST00000622571 220 ntBASIC1.6□□□□□ -2.15
VCPIP1Q96JH7 Y_RNA.85-201ENST00000363014 111 ntBASIC1.59□□□□□ -2.15
VCPIP1Q96JH7 RNY4P6-201ENST00000363667 96 ntBASIC1.59□□□□□ -2.15
VCPIP1Q96JH7 MIR526A1-201ENST00000384897 85 ntBASIC1.59□□□□□ -2.15
VCPIP1Q96JH7 MIR320A-201ENST00000385302 82 ntBASIC1.59□□□□□ -2.15
VCPIP1Q96JH7 RNU7-67P-201ENST00000459003 62 ntBASIC1.59□□□□□ -2.15
VCPIP1Q96JH7 RNU7-45P-201ENST00000459460 63 ntBASIC1.59□□□□□ -2.15
VCPIP1Q96JH7 AC023790.1-201ENST00000482174 347 ntBASIC1.59□□□□□ -2.15
VCPIP1Q96JH7 SNORA31.4-201ENST00000516049 129 ntBASIC1.59□□□□□ -2.15
VCPIP1Q96JH7 RNU6-958P-201ENST00000516995 106 ntBASIC1.59□□□□□ -2.15
VCPIP1Q96JH7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
VCPIP1Q96JH7 AL589743.1-201ENST00000551932 2712 ntBASIC1.59□□□□□ -2.16
VCPIP1Q96JH7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.58□□□□□ -2.16
VCPIP1Q96JH7 Y_RNA.466-201ENST00000384294 113 ntBASIC1.58□□□□□ -2.16
VCPIP1Q96JH7 RNU6-106P-201ENST00000384405 107 ntBASIC1.58□□□□□ -2.16
VCPIP1Q96JH7 SNORD28B-201ENST00000390993 75 ntBASIC1.58□□□□□ -2.16
VCPIP1Q96JH7 MIR1304-201ENST00000408243 91 ntBASIC1.58□□□□□ -2.16
VCPIP1Q96JH7 RNA5SP89-201ENST00000410300 108 ntBASIC1.58□□□□□ -2.16
VCPIP1Q96JH7 SNORD123-201ENST00000459473 70 ntBASIC1.58□□□□□ -2.16
VCPIP1Q96JH7 RNU6-168P-201ENST00000516189 101 ntBASIC1.58□□□□□ -2.16
VCPIP1Q96JH7 MIR548AR-201ENST00000582191 57 ntBASIC1.58□□□□□ -2.16
VCPIP1Q96JH7 FAM106DP-201ENST00000586416 501 ntBASIC1.58□□□□□ -2.16
VCPIP1Q96JH7 RNU1-42P-201ENST00000364033 160 ntBASIC1.57□□□□□ -2.16
VCPIP1Q96JH7 Y_RNA.362-201ENST00000365518 110 ntBASIC1.57□□□□□ -2.16
VCPIP1Q96JH7 RNU6-554P-201ENST00000410466 106 ntBASIC1.57□□□□□ -2.16
VCPIP1Q96JH7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.57□□□□□ -2.16
VCPIP1Q96JH7 AC015688.6-201ENST00000577737 104 ntBASIC1.57□□□□□ -2.16
VCPIP1Q96JH7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.57□□□□□ -2.16
VCPIP1Q96JH7 AL645939.4-201ENST00000604495 135 ntBASIC1.57□□□□□ -2.16
VCPIP1Q96JH7 MIR8063-201ENST00000621930 81 ntBASIC1.57□□□□□ -2.16
VCPIP1Q96JH7 AC021613.1-201ENST00000623880 111 ntBASIC1.57□□□□□ -2.16
VCPIP1Q96JH7 AL442644.1-201ENST00000454390 3105 ntBASIC1.56□□□□□ -2.16
VCPIP1Q96JH7 MIR302D-201ENST00000362275 68 ntBASIC1.56□□□□□ -2.16
VCPIP1Q96JH7 RNU6-1123P-201ENST00000362347 106 ntBASIC1.56□□□□□ -2.16
VCPIP1Q96JH7 RNU6-1298P-201ENST00000362456 101 ntBASIC1.56□□□□□ -2.16
VCPIP1Q96JH7 RNU6-392P-201ENST00000364926 101 ntBASIC1.56□□□□□ -2.16
VCPIP1Q96JH7 Y_RNA.495-201ENST00000384435 112 ntBASIC1.56□□□□□ -2.16
VCPIP1Q96JH7 RNU6-997P-201ENST00000384725 107 ntBASIC1.56□□□□□ -2.16
VCPIP1Q96JH7 MIR513A1-201ENST00000385138 129 ntBASIC1.56□□□□□ -2.16
VCPIP1Q96JH7 MIR1276-201ENST00000408707 83 ntBASIC1.56□□□□□ -2.16
VCPIP1Q96JH7 RNA5SP144-201ENST00000410846 116 ntBASIC1.56□□□□□ -2.16
VCPIP1Q96JH7 AL022718.1-201ENST00000412004 84 ntBASIC1.56□□□□□ -2.16
VCPIP1Q96JH7 AL512326.2-201ENST00000426359 151 ntBASIC1.56□□□□□ -2.16
VCPIP1Q96JH7 HSPE1P24-201ENST00000450782 238 ntBASIC1.56□□□□□ -2.16
VCPIP1Q96JH7 snoU13.9-201ENST00000458927 103 ntBASIC1.56□□□□□ -2.16
VCPIP1Q96JH7 RNU7-6P-201ENST00000516845 62 ntBASIC1.56□□□□□ -2.16
VCPIP1Q96JH7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 220.2 ms