Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RNA5SP261-201ENST00000410536 106 ntBASIC1.42□□□□□ -2.18
CDK5RAP3Q96JB5 BTF3P4-201ENST00000418852 495 ntBASIC1.42□□□□□ -2.18
CDK5RAP3Q96JB5 MIR2115-201ENST00000516657 100 ntBASIC1.42□□□□□ -2.18
CDK5RAP3Q96JB5 AC068338.1-201ENST00000565567 176 ntBASIC1.42□□□□□ -2.18
CDK5RAP3Q96JB5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.42□□□□□ -2.18
CDK5RAP3Q96JB5 MIR3152-201ENST00000579801 74 ntBASIC1.42□□□□□ -2.18
CDK5RAP3Q96JB5 AC021613.1-201ENST00000623880 111 ntBASIC1.42□□□□□ -2.18
CDK5RAP3Q96JB5 Z97988.1-201ENST00000637697 135 ntBASIC1.42□□□□□ -2.18
CDK5RAP3Q96JB5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.42□□□□□ -2.18
CDK5RAP3Q96JB5 SNORA80D-201ENST00000384488 135 ntBASIC1.41□□□□□ -2.18
CDK5RAP3Q96JB5 MIR618-201ENST00000385287 98 ntBASIC1.41□□□□□ -2.18
CDK5RAP3Q96JB5 RNU6-1319P-201ENST00000390855 104 ntBASIC1.41□□□□□ -2.18
CDK5RAP3Q96JB5 RNU6-747P-201ENST00000390928 104 ntBASIC1.41□□□□□ -2.18
CDK5RAP3Q96JB5 RNU6-241P-201ENST00000391148 104 ntBASIC1.41□□□□□ -2.18
CDK5RAP3Q96JB5 SNORA26.6-201ENST00000391256 115 ntBASIC1.41□□□□□ -2.18
CDK5RAP3Q96JB5 RNU6-177P-201ENST00000411257 104 ntBASIC1.41□□□□□ -2.18
CDK5RAP3Q96JB5 AL591704.2-201ENST00000421658 181 ntBASIC1.41□□□□□ -2.18
CDK5RAP3Q96JB5 SNORD79.1-201ENST00000516069 84 ntBASIC1.41□□□□□ -2.18
CDK5RAP3Q96JB5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.41□□□□□ -2.18
CDK5RAP3Q96JB5 SEPT14P17-201ENST00000617978 177 ntBASIC1.41□□□□□ -2.18
CDK5RAP3Q96JB5 AP001340.1-201ENST00000624405 217 ntBASIC1.41□□□□□ -2.18
CDK5RAP3Q96JB5 AC010332.2-201ENST00000613083 1904 ntBASIC1.4□□□□□ -2.18
CDK5RAP3Q96JB5 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CDK5RAP3Q96JB5 RNU6-349P-201ENST00000362402 107 ntBASIC1.4□□□□□ -2.19
CDK5RAP3Q96JB5 RNU6-690P-201ENST00000365242 106 ntBASIC1.4□□□□□ -2.19
CDK5RAP3Q96JB5 SNORD38B-201ENST00000384690 67 ntBASIC1.4□□□□□ -2.19
CDK5RAP3Q96JB5 Y_RNA.568-201ENST00000384742 113 ntBASIC1.4□□□□□ -2.19
CDK5RAP3Q96JB5 RPS3AP1-201ENST00000413190 320 ntBASIC1.4□□□□□ -2.19
CDK5RAP3Q96JB5 AP1B1P2-201ENST00000416196 106 ntBASIC1.4□□□□□ -2.19
CDK5RAP3Q96JB5 Y_RNA.651-201ENST00000459380 103 ntBASIC1.4□□□□□ -2.19
CDK5RAP3Q96JB5 Y_RNA.692-201ENST00000516627 105 ntBASIC1.4□□□□□ -2.19
CDK5RAP3Q96JB5 MIR3660-201ENST00000584845 100 ntBASIC1.4□□□□□ -2.19
CDK5RAP3Q96JB5 AL353770.2-201ENST00000620024 78 ntBASIC1.4□□□□□ -2.19
CDK5RAP3Q96JB5 SNORD38B-202ENST00000625943 69 ntBASIC1.4□□□□□ -2.19
CDK5RAP3Q96JB5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CDK5RAP3Q96JB5 RNU6-654P-201ENST00000364373 107 ntBASIC1.39□□□□□ -2.19
CDK5RAP3Q96JB5 RNU6-187P-201ENST00000384139 106 ntBASIC1.39□□□□□ -2.19
CDK5RAP3Q96JB5 RNU7-21P-201ENST00000459430 62 ntBASIC1.39□□□□□ -2.19
CDK5RAP3Q96JB5 RNA5SP458-201ENST00000516188 119 ntBASIC1.39□□□□□ -2.19
CDK5RAP3Q96JB5 AC011603.4-201ENST00000611325 277 ntBASIC1.39□□□□□ -2.19
CDK5RAP3Q96JB5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CDK5RAP3Q96JB5 RNA5SP95-201ENST00000410319 137 ntBASIC1.38□□□□□ -2.19
CDK5RAP3Q96JB5 RNU6-602P-201ENST00000411155 105 ntBASIC1.38□□□□□ -2.19
CDK5RAP3Q96JB5 RNU6-240P-201ENST00000516098 97 ntBASIC1.38□□□□□ -2.19
CDK5RAP3Q96JB5 AP000753.3-201ENST00000604083 169 ntBASIC1.38□□□□□ -2.19
CDK5RAP3Q96JB5 AC008163.1-202ENST00000636004 2889 ntBASIC1.37□□□□□ -2.19
CDK5RAP3Q96JB5 RNU6-205P-201ENST00000390858 107 ntBASIC1.37□□□□□ -2.19
CDK5RAP3Q96JB5 RNU6-613P-201ENST00000410412 108 ntBASIC1.37□□□□□ -2.19
CDK5RAP3Q96JB5 MRPL35P3-201ENST00000421557 364 ntBASIC1.37□□□□□ -2.19
CDK5RAP3Q96JB5 SUMO1P3-201ENST00000439961 304 ntBASIC1.37□□□□□ -2.19
CDK5RAP3Q96JB5 RNU6-113P-201ENST00000516653 101 ntBASIC1.37□□□□□ -2.19
CDK5RAP3Q96JB5 AC027335.2-201ENST00000624030 375 ntBASIC1.37□□□□□ -2.19
CDK5RAP3Q96JB5 SNORA22.1-201ENST00000362701 134 ntBASIC1.36□□□□□ -2.19
CDK5RAP3Q96JB5 Y_RNA.354-201ENST00000365448 111 ntBASIC1.36□□□□□ -2.19
CDK5RAP3Q96JB5 SNORA40-201ENST00000388090 126 ntBASIC1.36□□□□□ -2.19
CDK5RAP3Q96JB5 AC244023.1-201ENST00000426884 112 ntBASIC1.36□□□□□ -2.19
CDK5RAP3Q96JB5 MTND4LP9-201ENST00000427694 174 ntBASIC1.36□□□□□ -2.19
CDK5RAP3Q96JB5 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.36□□□□□ -2.19
CDK5RAP3Q96JB5 RNU7-90P-201ENST00000459216 62 ntBASIC1.36□□□□□ -2.19
CDK5RAP3Q96JB5 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.36□□□□□ -2.19
CDK5RAP3Q96JB5 RNA5SP404-201ENST00000517118 132 ntBASIC1.36□□□□□ -2.19
CDK5RAP3Q96JB5 AC133485.4-201ENST00000561835 220 ntBASIC1.36□□□□□ -2.19
CDK5RAP3Q96JB5 AC138907.4-201ENST00000570107 226 ntBASIC1.36□□□□□ -2.19
CDK5RAP3Q96JB5 Y_RNA.757-201ENST00000578934 114 ntBASIC1.36□□□□□ -2.19
CDK5RAP3Q96JB5 MIR3121-201ENST00000579680 77 ntBASIC1.36□□□□□ -2.19
CDK5RAP3Q96JB5 AC242498.1-201ENST00000604134 111 ntBASIC1.36□□□□□ -2.19
CDK5RAP3Q96JB5 U7.2-201ENST00000607576 63 ntBASIC1.36□□□□□ -2.19
CDK5RAP3Q96JB5 Y_RNA.294-201ENST00000364916 102 ntBASIC1.35□□□□□ -2.19
CDK5RAP3Q96JB5 Y_RNA.430-201ENST00000384081 110 ntBASIC1.35□□□□□ -2.19
CDK5RAP3Q96JB5 SNORA2B-201ENST00000384583 137 ntBASIC1.35□□□□□ -2.19
CDK5RAP3Q96JB5 SNORD12-201ENST00000391002 90 ntBASIC1.35□□□□□ -2.19
CDK5RAP3Q96JB5 RNU6-257P-201ENST00000410238 98 ntBASIC1.35□□□□□ -2.19
CDK5RAP3Q96JB5 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.35□□□□□ -2.19
CDK5RAP3Q96JB5 AC023827.1-201ENST00000569247 97 ntBASIC1.35□□□□□ -2.19
CDK5RAP3Q96JB5 MIR4264-201ENST00000583520 66 ntBASIC1.35□□□□□ -2.19
CDK5RAP3Q96JB5 AC091895.1-201ENST00000624494 256 ntBASIC1.35□□□□□ -2.19
CDK5RAP3Q96JB5 MIR613-201ENST00000385248 95 ntBASIC1.34□□□□□ -2.19
CDK5RAP3Q96JB5 SNORD12C-201ENST00000386307 89 ntBASIC1.34□□□□□ -2.19
CDK5RAP3Q96JB5 MT-TN-201ENST00000387400 73 ntBASIC1.34□□□□□ -2.19
CDK5RAP3Q96JB5 AC063976.4-201ENST00000421971 163 ntBASIC1.34□□□□□ -2.19
CDK5RAP3Q96JB5 RNU6-893P-201ENST00000458841 100 ntBASIC1.34□□□□□ -2.19
CDK5RAP3Q96JB5 AC021443.1-201ENST00000604478 211 ntBASIC1.34□□□□□ -2.19
CDK5RAP3Q96JB5 MIR6078-201ENST00000611069 100 ntBASIC1.34□□□□□ -2.19
CDK5RAP3Q96JB5 TUG1_4.1-201ENST00000619464 181 ntBASIC1.34□□□□□ -2.19
CDK5RAP3Q96JB5 MIR6841-201ENST00000637129 72 ntBASIC1.34□□□□□ -2.19
CDK5RAP3Q96JB5 Y_RNA.114-201ENST00000363265 113 ntBASIC1.33□□□□□ -2.2
CDK5RAP3Q96JB5 Y_RNA.366-201ENST00000365540 102 ntBASIC1.33□□□□□ -2.2
CDK5RAP3Q96JB5 RNA5SP144-201ENST00000410846 116 ntBASIC1.33□□□□□ -2.2
CDK5RAP3Q96JB5 AL022718.1-201ENST00000412004 84 ntBASIC1.33□□□□□ -2.2
CDK5RAP3Q96JB5 AC002429.1-201ENST00000437672 148 ntBASIC1.33□□□□□ -2.2
CDK5RAP3Q96JB5 RN7SKP179-201ENST00000516126 217 ntBASIC1.33□□□□□ -2.2
CDK5RAP3Q96JB5 MIR4305-201ENST00000583252 102 ntBASIC1.33□□□□□ -2.2
CDK5RAP3Q96JB5 AC108081.1-201ENST00000604358 221 ntBASIC1.33□□□□□ -2.2
CDK5RAP3Q96JB5 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CDK5RAP3Q96JB5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.32□□□□□ -2.2
CDK5RAP3Q96JB5 POLR2J4-204ENST00000418424 324 ntBASIC1.32□□□□□ -2.2
CDK5RAP3Q96JB5 OR2A41P-201ENST00000473586 105 ntBASIC1.32□□□□□ -2.2
CDK5RAP3Q96JB5 AC036111.3-201ENST00000526389 112 ntBASIC1.32□□□□□ -2.2
CDK5RAP3Q96JB5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CDK5RAP3Q96JB5 MIR377-201ENST00000362145 69 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 875.6 ms