Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SNORA2B-201ENST00000384583 137 ntBASIC2.69□□□□□ -1.98
TRIM11Q96F44 RNU6-1067P-201ENST00000384752 107 ntBASIC2.69□□□□□ -1.98
TRIM11Q96F44 MIR524-201ENST00000385242 87 ntBASIC2.69□□□□□ -1.98
TRIM11Q96F44 SNORA40.18-201ENST00000391200 128 ntBASIC2.69□□□□□ -1.98
TRIM11Q96F44 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.69□□□□□ -1.98
TRIM11Q96F44 SNORD123-201ENST00000459473 70 ntBASIC2.69□□□□□ -1.98
TRIM11Q96F44 SNORA31.11-201ENST00000516528 139 ntBASIC2.69□□□□□ -1.98
TRIM11Q96F44 MIR8065-201ENST00000620577 100 ntBASIC2.69□□□□□ -1.98
TRIM11Q96F44 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
TRIM11Q96F44 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.68□□□□□ -1.98
TRIM11Q96F44 RNA5SP133-201ENST00000363368 119 ntBASIC2.68□□□□□ -1.98
TRIM11Q96F44 SNORA70.4-201ENST00000365509 134 ntBASIC2.68□□□□□ -1.98
TRIM11Q96F44 MIR144-201ENST00000384886 86 ntBASIC2.68□□□□□ -1.98
TRIM11Q96F44 AL450471.1-201ENST00000447509 127 ntBASIC2.68□□□□□ -1.98
TRIM11Q96F44 SNORD109B-201ENST00000458961 67 ntBASIC2.68□□□□□ -1.98
TRIM11Q96F44 SNORD109A-201ENST00000459128 67 ntBASIC2.68□□□□□ -1.98
TRIM11Q96F44 RNU6-557P-201ENST00000516842 110 ntBASIC2.68□□□□□ -1.98
TRIM11Q96F44 AC105081.1-201ENST00000617727 106 ntBASIC2.68□□□□□ -1.98
TRIM11Q96F44 RNA5SP456-201ENST00000364002 114 ntBASIC2.67□□□□□ -1.98
TRIM11Q96F44 RNU6-380P-201ENST00000410207 107 ntBASIC2.67□□□□□ -1.98
TRIM11Q96F44 AC093850.1-201ENST00000454121 251 ntBASIC2.67□□□□□ -1.98
TRIM11Q96F44 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM11Q96F44 U4.3-201ENST00000621047 82 ntBASIC2.67□□□□□ -1.98
TRIM11Q96F44 AP001362.1-201ENST00000625165 124 ntBASIC2.67□□□□□ -1.98
TRIM11Q96F44 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TRIM11Q96F44 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.66□□□□□ -1.98
TRIM11Q96F44 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.66□□□□□ -1.98
TRIM11Q96F44 RNU4-32P-201ENST00000363404 141 ntBASIC2.66□□□□□ -1.98
TRIM11Q96F44 SNORA9-201ENST00000384215 133 ntBASIC2.66□□□□□ -1.98
TRIM11Q96F44 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
TRIM11Q96F44 SNORA48.2-201ENST00000390926 124 ntBASIC2.66□□□□□ -1.98
TRIM11Q96F44 AC125388.1-201ENST00000459631 156 ntBASIC2.66□□□□□ -1.98
TRIM11Q96F44 RNU6-917P-201ENST00000516294 104 ntBASIC2.66□□□□□ -1.98
TRIM11Q96F44 GTF3AP2-201ENST00000557014 266 ntBASIC2.66□□□□□ -1.98
TRIM11Q96F44 SNORD14A-201ENST00000606526 91 ntBASIC2.66□□□□□ -1.98
TRIM11Q96F44 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM11Q96F44 Y_RNA.333-201ENST00000365274 102 ntBASIC2.65□□□□□ -1.99
TRIM11Q96F44 RNU6-411P-201ENST00000384451 107 ntBASIC2.65□□□□□ -1.99
TRIM11Q96F44 RNU1-148P-201ENST00000384472 162 ntBASIC2.65□□□□□ -1.99
TRIM11Q96F44 RNU6-1031P-201ENST00000384773 107 ntBASIC2.65□□□□□ -1.99
TRIM11Q96F44 MIR27B-201ENST00000385129 97 ntBASIC2.65□□□□□ -1.99
TRIM11Q96F44 SNORD4B-201ENST00000459083 72 ntBASIC2.65□□□□□ -1.99
TRIM11Q96F44 snoU13.11-201ENST00000459219 104 ntBASIC2.65□□□□□ -1.99
TRIM11Q96F44 RN7SKP132-201ENST00000516001 208 ntBASIC2.65□□□□□ -1.99
TRIM11Q96F44 RNU6-871P-201ENST00000516122 100 ntBASIC2.65□□□□□ -1.99
TRIM11Q96F44 Z97988.1-201ENST00000637697 135 ntBASIC2.65□□□□□ -1.99
TRIM11Q96F44 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
TRIM11Q96F44 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.64□□□□□ -1.99
TRIM11Q96F44 HSBP1P2-201ENST00000299671 229 ntBASIC2.64□□□□□ -1.99
TRIM11Q96F44 MIRLET7A1-201ENST00000362295 80 ntBASIC2.64□□□□□ -1.99
TRIM11Q96F44 AC026271.5-201ENST00000577873 130 ntBASIC2.64□□□□□ -1.99
TRIM11Q96F44 MIR3134-201ENST00000579433 74 ntBASIC2.64□□□□□ -1.99
TRIM11Q96F44 AC245884.12-201ENST00000615364 59 ntBASIC2.64□□□□□ -1.99
TRIM11Q96F44 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM11Q96F44 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM11Q96F44 RNU1-58P-201ENST00000362413 163 ntBASIC2.63□□□□□ -1.99
TRIM11Q96F44 SNORA3A-201ENST00000364113 130 ntBASIC2.63□□□□□ -1.99
TRIM11Q96F44 RNU6-686P-201ENST00000364839 107 ntBASIC2.63□□□□□ -1.99
TRIM11Q96F44 SCARNA18B-201ENST00000458806 135 ntBASIC2.63□□□□□ -1.99
TRIM11Q96F44 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.63□□□□□ -1.99
TRIM11Q96F44 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.63□□□□□ -1.99
TRIM11Q96F44 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
TRIM11Q96F44 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
TRIM11Q96F44 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
TRIM11Q96F44 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TRIM11Q96F44 COTL1P1-201ENST00000422309 375 ntBASIC2.62□□□□□ -1.99
TRIM11Q96F44 RPL23AP6-201ENST00000446637 472 ntBASIC2.62□□□□□ -1.99
TRIM11Q96F44 MIR5094-201ENST00000578766 85 ntBASIC2.62□□□□□ -1.99
TRIM11Q96F44 MIR7106-201ENST00000612419 65 ntBASIC2.62□□□□□ -1.99
TRIM11Q96F44 MIR8066-201ENST00000617280 78 ntBASIC2.62□□□□□ -1.99
TRIM11Q96F44 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.62□□□□□ -1.99
TRIM11Q96F44 AP000648.3-201ENST00000623539 4507 ntBASIC2.62□□□□□ -1.99
TRIM11Q96F44 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
TRIM11Q96F44 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TRIM11Q96F44 SNORA63.2-201ENST00000362603 126 ntBASIC2.61□□□□□ -1.99
TRIM11Q96F44 Y_RNA.340-201ENST00000365330 92 ntBASIC2.61□□□□□ -1.99
TRIM11Q96F44 MIR526A1-201ENST00000384897 85 ntBASIC2.61□□□□□ -1.99
TRIM11Q96F44 MIR29C-201ENST00000385231 88 ntBASIC2.61□□□□□ -1.99
TRIM11Q96F44 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.61□□□□□ -1.99
TRIM11Q96F44 AL512598.1-201ENST00000610158 273 ntBASIC2.61□□□□□ -1.99
TRIM11Q96F44 MIR6840-201ENST00000611937 71 ntBASIC2.61□□□□□ -1.99
TRIM11Q96F44 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.61□□□□□ -1.99
TRIM11Q96F44 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TRIM11Q96F44 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
TRIM11Q96F44 SNORD115-3-201ENST00000363100 82 ntBASIC2.6□□□□□ -1.99
TRIM11Q96F44 SNORA6-201ENST00000384033 151 ntBASIC2.6□□□□□ -1.99
TRIM11Q96F44 RNA5SP181-201ENST00000410246 98 ntBASIC2.6□□□□□ -1.99
TRIM11Q96F44 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM11Q96F44 RPS29P11-201ENST00000496507 171 ntBASIC2.6□□□□□ -1.99
TRIM11Q96F44 Y_RNA.660-201ENST00000516002 120 ntBASIC2.6□□□□□ -1.99
TRIM11Q96F44 MIR3200-201ENST00000580767 85 ntBASIC2.6□□□□□ -1.99
TRIM11Q96F44 AL513423.1-201ENST00000621695 132 ntBASIC2.6□□□□□ -1.99
TRIM11Q96F44 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM11Q96F44 SNORD114-30-201ENST00000364448 72 ntBASIC2.59□□□□□ -1.99
TRIM11Q96F44 RNA5SP320-201ENST00000516263 124 ntBASIC2.59□□□□□ -1.99
TRIM11Q96F44 RNU6-1015P-201ENST00000517121 99 ntBASIC2.59□□□□□ -1.99
TRIM11Q96F44 CYP3A52P-201ENST00000563326 91 ntBASIC2.59□□□□□ -1.99
TRIM11Q96F44 MIR4796-201ENST00000580742 81 ntBASIC2.59□□□□□ -1.99
TRIM11Q96F44 AP000753.3-201ENST00000604083 169 ntBASIC2.59□□□□□ -1.99
TRIM11Q96F44 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms