Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 AC015712.3-201ENST00000559380 164 ntBASIC1.67□□□□□ -2.14
PTCD3Q96EY7 MIR8074-201ENST00000615081 81 ntBASIC1.67□□□□□ -2.14
PTCD3Q96EY7 AC008133.2-201ENST00000624540 351 ntBASIC1.67□□□□□ -2.14
PTCD3Q96EY7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.66□□□□□ -2.14
PTCD3Q96EY7 Y_RNA.85-201ENST00000363014 111 ntBASIC1.66□□□□□ -2.14
PTCD3Q96EY7 RNY4P6-201ENST00000363667 96 ntBASIC1.66□□□□□ -2.14
PTCD3Q96EY7 Y_RNA.344-201ENST00000365381 112 ntBASIC1.66□□□□□ -2.14
PTCD3Q96EY7 Y_RNA.362-201ENST00000365518 110 ntBASIC1.66□□□□□ -2.14
PTCD3Q96EY7 Y_RNA.430-201ENST00000384081 110 ntBASIC1.66□□□□□ -2.14
PTCD3Q96EY7 SNORD12C-201ENST00000386307 89 ntBASIC1.66□□□□□ -2.14
PTCD3Q96EY7 RNU6-482P-201ENST00000391068 107 ntBASIC1.66□□□□□ -2.14
PTCD3Q96EY7 RNU7-41P-201ENST00000515917 61 ntBASIC1.66□□□□□ -2.14
PTCD3Q96EY7 DNAJC19P9-201ENST00000555084 351 ntBASIC1.66□□□□□ -2.14
PTCD3Q96EY7 AC084768.2-201ENST00000622736 221 ntBASIC1.66□□□□□ -2.14
PTCD3Q96EY7 SNORA22.1-201ENST00000362701 134 ntBASIC1.65□□□□□ -2.15
PTCD3Q96EY7 SNORD115-2-201ENST00000362842 82 ntBASIC1.65□□□□□ -2.15
PTCD3Q96EY7 SNORD115-20-201ENST00000365099 82 ntBASIC1.65□□□□□ -2.15
PTCD3Q96EY7 RNU6-147P-201ENST00000383983 107 ntBASIC1.65□□□□□ -2.15
PTCD3Q96EY7 RNU6-1067P-201ENST00000384752 107 ntBASIC1.65□□□□□ -2.15
PTCD3Q96EY7 AL022718.1-201ENST00000412004 84 ntBASIC1.65□□□□□ -2.15
PTCD3Q96EY7 snoU13.16-201ENST00000459350 104 ntBASIC1.65□□□□□ -2.15
PTCD3Q96EY7 RPS23P4-201ENST00000487908 423 ntBASIC1.65□□□□□ -2.15
PTCD3Q96EY7 RNU6-922P-201ENST00000516753 99 ntBASIC1.65□□□□□ -2.15
PTCD3Q96EY7 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.65□□□□□ -2.15
PTCD3Q96EY7 MIR302D-201ENST00000362275 68 ntBASIC1.64□□□□□ -2.15
PTCD3Q96EY7 RNU6-1107P-201ENST00000364817 104 ntBASIC1.64□□□□□ -2.15
PTCD3Q96EY7 Y_RNA.470-201ENST00000384307 117 ntBASIC1.64□□□□□ -2.15
PTCD3Q96EY7 RNU6-106P-201ENST00000384405 107 ntBASIC1.64□□□□□ -2.15
PTCD3Q96EY7 MIR548D2-201ENST00000384955 97 ntBASIC1.64□□□□□ -2.15
PTCD3Q96EY7 AL451046.2-201ENST00000403074 277 ntBASIC1.64□□□□□ -2.15
PTCD3Q96EY7 AC005908.1-201ENST00000468701 347 ntBASIC1.64□□□□□ -2.15
PTCD3Q96EY7 RNU6-322P-201ENST00000516010 103 ntBASIC1.64□□□□□ -2.15
PTCD3Q96EY7 MIR3152-201ENST00000579801 74 ntBASIC1.64□□□□□ -2.15
PTCD3Q96EY7 MIR548AO-201ENST00000579992 96 ntBASIC1.64□□□□□ -2.15
PTCD3Q96EY7 MIR3163-201ENST00000581592 73 ntBASIC1.64□□□□□ -2.15
PTCD3Q96EY7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.64□□□□□ -2.15
PTCD3Q96EY7 AL513534.2-201ENST00000603836 250 ntBASIC1.64□□□□□ -2.15
PTCD3Q96EY7 MIR6845-201ENST00000613182 61 ntBASIC1.64□□□□□ -2.15
PTCD3Q96EY7 AC087741.2-201ENST00000619415 172 ntBASIC1.64□□□□□ -2.15
PTCD3Q96EY7 Y_RNA.116-201ENST00000363292 103 ntBASIC1.63□□□□□ -2.15
PTCD3Q96EY7 SNORA63.5-201ENST00000363548 123 ntBASIC1.63□□□□□ -2.15
PTCD3Q96EY7 MIR759-201ENST00000390224 91 ntBASIC1.63□□□□□ -2.15
PTCD3Q96EY7 MIR764-201ENST00000390811 85 ntBASIC1.63□□□□□ -2.15
PTCD3Q96EY7 AC090844.1-201ENST00000422019 156 ntBASIC1.63□□□□□ -2.15
PTCD3Q96EY7 HMGN2P23-201ENST00000456759 269 ntBASIC1.63□□□□□ -2.15
PTCD3Q96EY7 MIR1270-201ENST00000459320 83 ntBASIC1.63□□□□□ -2.15
PTCD3Q96EY7 RNU6-412P-201ENST00000516434 106 ntBASIC1.63□□□□□ -2.15
PTCD3Q96EY7 RNU7-6P-201ENST00000516845 62 ntBASIC1.63□□□□□ -2.15
PTCD3Q96EY7 RNU6-295P-201ENST00000516901 104 ntBASIC1.63□□□□□ -2.15
PTCD3Q96EY7 RNU6-250P-201ENST00000516958 103 ntBASIC1.63□□□□□ -2.15
PTCD3Q96EY7 MIR3192-201ENST00000584920 77 ntBASIC1.63□□□□□ -2.15
PTCD3Q96EY7 uc_338.28-201ENST00000612082 187 ntBASIC1.63□□□□□ -2.15
PTCD3Q96EY7 RNU6-554P-201ENST00000410466 106 ntBASIC1.62□□□□□ -2.15
PTCD3Q96EY7 RNA5SP261-201ENST00000410536 106 ntBASIC1.62□□□□□ -2.15
PTCD3Q96EY7 snoU13.25-201ENST00000458945 104 ntBASIC1.62□□□□□ -2.15
PTCD3Q96EY7 RNU7-113P-201ENST00000459273 62 ntBASIC1.62□□□□□ -2.15
PTCD3Q96EY7 AC113410.1-201ENST00000505029 247 ntBASIC1.62□□□□□ -2.15
PTCD3Q96EY7 RNU6-548P-201ENST00000517083 115 ntBASIC1.62□□□□□ -2.15
PTCD3Q96EY7 MIR3613-201ENST00000579844 87 ntBASIC1.62□□□□□ -2.15
PTCD3Q96EY7 MIR4251-201ENST00000635819 61 ntBASIC1.62□□□□□ -2.15
PTCD3Q96EY7 Z97988.1-201ENST00000637697 135 ntBASIC1.62□□□□□ -2.15
PTCD3Q96EY7 WWP1P1-201ENST00000466609 2769 ntBASIC1.62□□□□□ -2.15
PTCD3Q96EY7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
PTCD3Q96EY7 Y_RNA.323-201ENST00000365157 109 ntBASIC1.61□□□□□ -2.15
PTCD3Q96EY7 RNU6-1014P-201ENST00000383940 103 ntBASIC1.61□□□□□ -2.15
PTCD3Q96EY7 RNU6-893P-201ENST00000458841 100 ntBASIC1.61□□□□□ -2.15
PTCD3Q96EY7 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.61□□□□□ -2.15
PTCD3Q96EY7 MIR4255-201ENST00000579351 72 ntBASIC1.61□□□□□ -2.15
PTCD3Q96EY7 RNU6-94P-201ENST00000607728 107 ntBASIC1.61□□□□□ -2.15
PTCD3Q96EY7 AL096861.1-201ENST00000610899 123 ntBASIC1.61□□□□□ -2.15
PTCD3Q96EY7 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.6□□□□□ -2.15
PTCD3Q96EY7 SNORA26.9-201ENST00000391322 122 ntBASIC1.6□□□□□ -2.15
PTCD3Q96EY7 RNU6-602P-201ENST00000411155 105 ntBASIC1.6□□□□□ -2.15
PTCD3Q96EY7 RPS3AP1-201ENST00000413190 320 ntBASIC1.6□□□□□ -2.15
PTCD3Q96EY7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.6□□□□□ -2.15
PTCD3Q96EY7 AC009474.2-201ENST00000451383 136 ntBASIC1.6□□□□□ -2.15
PTCD3Q96EY7 RNA5SP33-201ENST00000516687 98 ntBASIC1.6□□□□□ -2.15
PTCD3Q96EY7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.6□□□□□ -2.15
PTCD3Q96EY7 AC068339.1-201ENST00000526965 141 ntBASIC1.6□□□□□ -2.15
PTCD3Q96EY7 MIR548AE2-201ENST00000583456 67 ntBASIC1.6□□□□□ -2.15
PTCD3Q96EY7 MIR502-201ENST00000606349 86 ntBASIC1.6□□□□□ -2.15
PTCD3Q96EY7 Y_RNA.773-201ENST00000607168 90 ntBASIC1.6□□□□□ -2.15
PTCD3Q96EY7 AL353997.5-201ENST00000618886 171 ntBASIC1.6□□□□□ -2.15
PTCD3Q96EY7 MIR8065-201ENST00000620577 100 ntBASIC1.6□□□□□ -2.15
PTCD3Q96EY7 AL589743.1-201ENST00000551932 2712 ntBASIC1.6□□□□□ -2.15
PTCD3Q96EY7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
PTCD3Q96EY7 MIR450A1-201ENST00000362262 91 ntBASIC1.59□□□□□ -2.15
PTCD3Q96EY7 SNORA1.1-201ENST00000364671 133 ntBASIC1.59□□□□□ -2.15
PTCD3Q96EY7 U8.6-201ENST00000364939 135 ntBASIC1.59□□□□□ -2.15
PTCD3Q96EY7 SNORD1A-201ENST00000364968 72 ntBASIC1.59□□□□□ -2.15
PTCD3Q96EY7 MIR320A-201ENST00000385302 82 ntBASIC1.59□□□□□ -2.15
PTCD3Q96EY7 MIR1302-7-201ENST00000408841 72 ntBASIC1.59□□□□□ -2.15
PTCD3Q96EY7 RNU4-69P-201ENST00000410677 143 ntBASIC1.59□□□□□ -2.15
PTCD3Q96EY7 RPL39P34-201ENST00000477141 156 ntBASIC1.59□□□□□ -2.15
PTCD3Q96EY7 SNORD111.1-201ENST00000516421 86 ntBASIC1.59□□□□□ -2.15
PTCD3Q96EY7 GHRLOS.1-201ENST00000610995 70 ntBASIC1.59□□□□□ -2.15
PTCD3Q96EY7 MIR8081-201ENST00000611533 95 ntBASIC1.59□□□□□ -2.15
PTCD3Q96EY7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
PTCD3Q96EY7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
PTCD3Q96EY7 SNORD115-19-201ENST00000363098 82 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms