Protein–RNA interactions for Protein: Q96DA2

RAB39B, Ras-related protein Rab-39B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39BQ96DA2 U6.90-201ENST00000614007 104 ntBASIC0.41□□□□□ -2.34
RAB39BQ96DA2 U6.70-201ENST00000620287 104 ntBASIC0.41□□□□□ -2.34
RAB39BQ96DA2 AC010487.4-201ENST00000637027 61 ntBASIC0.41□□□□□ -2.34
RAB39BQ96DA2 U6.104-201ENST00000637979 90 ntBASIC0.41□□□□□ -2.34
RAB39BQ96DA2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
RAB39BQ96DA2 SNORA1-201ENST00000384107 130 ntBASIC0.4□□□□□ -2.35
RAB39BQ96DA2 Y_RNA.512-201ENST00000384518 102 ntBASIC0.4□□□□□ -2.35
RAB39BQ96DA2 MIR193B-201ENST00000384907 83 ntBASIC0.4□□□□□ -2.35
RAB39BQ96DA2 MIR563-201ENST00000385080 79 ntBASIC0.4□□□□□ -2.35
RAB39BQ96DA2 SNORD12C-201ENST00000386307 89 ntBASIC0.4□□□□□ -2.35
RAB39BQ96DA2 MT-TF-201ENST00000387314 71 ntBASIC0.4□□□□□ -2.35
RAB39BQ96DA2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.4□□□□□ -2.35
RAB39BQ96DA2 RNU6-635P-201ENST00000516651 102 ntBASIC0.4□□□□□ -2.35
RAB39BQ96DA2 RNU6-1153P-201ENST00000516760 105 ntBASIC0.4□□□□□ -2.35
RAB39BQ96DA2 AC243829.6-201ENST00000612652 106 ntBASIC0.4□□□□□ -2.35
RAB39BQ96DA2 Y_RNA.23-201ENST00000362496 106 ntBASIC0.39□□□□□ -2.35
RAB39BQ96DA2 Y_RNA.351-201ENST00000365436 96 ntBASIC0.39□□□□□ -2.35
RAB39BQ96DA2 Y_RNA.422-201ENST00000384054 114 ntBASIC0.39□□□□□ -2.35
RAB39BQ96DA2 MIR1302-6-201ENST00000408466 90 ntBASIC0.39□□□□□ -2.35
RAB39BQ96DA2 RNA5SP261-201ENST00000410536 106 ntBASIC0.39□□□□□ -2.35
RAB39BQ96DA2 RNU7-102P-201ENST00000458948 62 ntBASIC0.39□□□□□ -2.35
RAB39BQ96DA2 RNU7-156P-201ENST00000517214 74 ntBASIC0.39□□□□□ -2.35
RAB39BQ96DA2 AC090897.1-201ENST00000580909 226 ntBASIC0.39□□□□□ -2.35
RAB39BQ96DA2 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.39□□□□□ -2.35
RAB39BQ96DA2 AL365265.1-201ENST00000621045 234 ntBASIC0.39□□□□□ -2.35
RAB39BQ96DA2 Y_RNA.11-201ENST00000362375 109 ntBASIC0.38□□□□□ -2.35
RAB39BQ96DA2 Y_RNA.542-201ENST00000384641 111 ntBASIC0.38□□□□□ -2.35
RAB39BQ96DA2 RNU6-381P-201ENST00000391259 108 ntBASIC0.38□□□□□ -2.35
RAB39BQ96DA2 SNORA79-201ENST00000408376 140 ntBASIC0.38□□□□□ -2.35
RAB39BQ96DA2 SNORD100-201ENST00000408573 76 ntBASIC0.38□□□□□ -2.35
RAB39BQ96DA2 AC098934.3-201ENST00000430450 190 ntBASIC0.38□□□□□ -2.35
RAB39BQ96DA2 SNORA68.3-201ENST00000515906 83 ntBASIC0.38□□□□□ -2.35
RAB39BQ96DA2 MIR4282-201ENST00000583613 67 ntBASIC0.38□□□□□ -2.35
RAB39BQ96DA2 SNORD92-201ENST00000585078 85 ntBASIC0.38□□□□□ -2.35
RAB39BQ96DA2 AC008608.1-201ENST00000603910 127 ntBASIC0.38□□□□□ -2.35
RAB39BQ96DA2 MIR6717-201ENST00000622747 73 ntBASIC0.38□□□□□ -2.35
RAB39BQ96DA2 MIR30D-201ENST00000362283 70 ntBASIC0.37□□□□□ -2.35
RAB39BQ96DA2 RNU6-238P-201ENST00000363313 106 ntBASIC0.37□□□□□ -2.35
RAB39BQ96DA2 RNA5SP499-201ENST00000363982 119 ntBASIC0.37□□□□□ -2.35
RAB39BQ96DA2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
RAB39BQ96DA2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.37□□□□□ -2.35
RAB39BQ96DA2 RNU7-80P-201ENST00000459562 61 ntBASIC0.37□□□□□ -2.35
RAB39BQ96DA2 AL442663.2-201ENST00000554385 511 ntBASIC0.37□□□□□ -2.35
RAB39BQ96DA2 MIR3129-201ENST00000581095 76 ntBASIC0.37□□□□□ -2.35
RAB39BQ96DA2 AC092634.7-201ENST00000621022 103 ntBASIC0.37□□□□□ -2.35
RAB39BQ96DA2 MIR8062-201ENST00000621515 85 ntBASIC0.37□□□□□ -2.35
RAB39BQ96DA2 RNU6-728P-201ENST00000365375 104 ntBASIC0.36□□□□□ -2.35
RAB39BQ96DA2 RNU4-17P-201ENST00000365598 141 ntBASIC0.36□□□□□ -2.35
RAB39BQ96DA2 VTRNA1-3-201ENST00000365645 89 ntBASIC0.36□□□□□ -2.35
RAB39BQ96DA2 Y_RNA.454-201ENST00000384224 113 ntBASIC0.36□□□□□ -2.35
RAB39BQ96DA2 Y_RNA.461-201ENST00000384263 103 ntBASIC0.36□□□□□ -2.35
RAB39BQ96DA2 Y_RNA.483-201ENST00000384380 101 ntBASIC0.36□□□□□ -2.35
RAB39BQ96DA2 RNU6-679P-201ENST00000391003 106 ntBASIC0.36□□□□□ -2.35
RAB39BQ96DA2 SNORA26.6-201ENST00000391256 115 ntBASIC0.36□□□□□ -2.35
RAB39BQ96DA2 RNA5SP193-201ENST00000410353 107 ntBASIC0.36□□□□□ -2.35
RAB39BQ96DA2 RNU7-45P-201ENST00000459460 63 ntBASIC0.36□□□□□ -2.35
RAB39BQ96DA2 MTATP8P1-201ENST00000467115 207 ntBASIC0.36□□□□□ -2.35
RAB39BQ96DA2 AC002350.1-201ENST00000490759 375 ntBASIC0.36□□□□□ -2.35
RAB39BQ96DA2 MIR5197-201ENST00000583721 112 ntBASIC0.36□□□□□ -2.35
RAB39BQ96DA2 RNU6-653P-201ENST00000363074 106 ntBASIC0.35□□□□□ -2.35
RAB39BQ96DA2 Y_RNA.416-201ENST00000384014 113 ntBASIC0.35□□□□□ -2.35
RAB39BQ96DA2 MT-TW-201ENST00000387382 68 ntBASIC0.35□□□□□ -2.35
RAB39BQ96DA2 Y_RNA.618-201ENST00000410949 107 ntBASIC0.35□□□□□ -2.35
RAB39BQ96DA2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.35□□□□□ -2.35
RAB39BQ96DA2 Y_RNA.720-201ENST00000517166 92 ntBASIC0.35□□□□□ -2.35
RAB39BQ96DA2 MIR1273G-201ENST00000577677 100 ntBASIC0.35□□□□□ -2.35
RAB39BQ96DA2 MIR6779-201ENST00000617283 64 ntBASIC0.35□□□□□ -2.35
RAB39BQ96DA2 MIR376A2-201ENST00000636782 80 ntBASIC0.35□□□□□ -2.35
RAB39BQ96DA2 MIRLET7D-201ENST00000362263 87 ntBASIC0.34□□□□□ -2.36
RAB39BQ96DA2 Y_RNA.176-201ENST00000363815 109 ntBASIC0.34□□□□□ -2.36
RAB39BQ96DA2 Y_RNA.262-201ENST00000364641 102 ntBASIC0.34□□□□□ -2.36
RAB39BQ96DA2 RNU6-561P-201ENST00000516222 102 ntBASIC0.34□□□□□ -2.36
RAB39BQ96DA2 AP003072.1-201ENST00000531740 145 ntBASIC0.34□□□□□ -2.36
RAB39BQ96DA2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.34□□□□□ -2.36
RAB39BQ96DA2 MIR3152-201ENST00000579801 74 ntBASIC0.34□□□□□ -2.36
RAB39BQ96DA2 AC006504.6-201ENST00000590142 199 ntBASIC0.34□□□□□ -2.36
RAB39BQ96DA2 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.34□□□□□ -2.36
RAB39BQ96DA2 AC091932.4-201ENST00000623386 200 ntBASIC0.34□□□□□ -2.36
RAB39BQ96DA2 AL596211.1-201ENST00000569873 2277 ntBASIC0.33□□□□□ -2.36
RAB39BQ96DA2 RNU6-103P-201ENST00000363686 107 ntBASIC0.33□□□□□ -2.36
RAB39BQ96DA2 Y_RNA.205-201ENST00000364128 113 ntBASIC0.33□□□□□ -2.36
RAB39BQ96DA2 RNA5SP117-201ENST00000365294 118 ntBASIC0.33□□□□□ -2.36
RAB39BQ96DA2 RNU6-1292P-201ENST00000383856 107 ntBASIC0.33□□□□□ -2.36
RAB39BQ96DA2 Y_RNA.574-201ENST00000384766 95 ntBASIC0.33□□□□□ -2.36
RAB39BQ96DA2 RNA5SP237-201ENST00000410414 113 ntBASIC0.33□□□□□ -2.36
RAB39BQ96DA2 RPL39P25-201ENST00000449384 154 ntBASIC0.33□□□□□ -2.36
RAB39BQ96DA2 RNU6-448P-201ENST00000517052 107 ntBASIC0.33□□□□□ -2.36
RAB39BQ96DA2 AL365205.2-201ENST00000594586 68 ntBASIC0.33□□□□□ -2.36
RAB39BQ96DA2 AC090625.1-201ENST00000357130 210 ntBASIC0.32□□□□□ -2.36
RAB39BQ96DA2 Y_RNA.352-201ENST00000365439 102 ntBASIC0.32□□□□□ -2.36
RAB39BQ96DA2 Y_RNA.430-201ENST00000384081 110 ntBASIC0.32□□□□□ -2.36
RAB39BQ96DA2 Y_RNA.518-201ENST00000384552 113 ntBASIC0.32□□□□□ -2.36
RAB39BQ96DA2 SNORD93-201ENST00000408813 74 ntBASIC0.32□□□□□ -2.36
RAB39BQ96DA2 RNU4-43P-201ENST00000410628 137 ntBASIC0.32□□□□□ -2.36
RAB39BQ96DA2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.32□□□□□ -2.36
RAB39BQ96DA2 SNORA25.12-201ENST00000516202 82 ntBASIC0.32□□□□□ -2.36
RAB39BQ96DA2 uc_338.16-201ENST00000621804 95 ntBASIC0.32□□□□□ -2.36
RAB39BQ96DA2 RNA5SP517-201ENST00000364724 117 ntBASIC0.31□□□□□ -2.36
RAB39BQ96DA2 RNU6-1160P-201ENST00000384546 104 ntBASIC0.31□□□□□ -2.36
RAB39BQ96DA2 SNORA20-201ENST00000384662 132 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 219.6 ms