Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RNU6-1190P-201ENST00000410811 104 ntBASIC1.5□□□□□ -2.17
ATG4AQ8WYN0 RNU6-781P-201ENST00000516377 101 ntBASIC1.5□□□□□ -2.17
ATG4AQ8WYN0 MIR3152-201ENST00000579801 74 ntBASIC1.5□□□□□ -2.17
ATG4AQ8WYN0 MIR548AO-201ENST00000579992 96 ntBASIC1.5□□□□□ -2.17
ATG4AQ8WYN0 MIR4305-201ENST00000583252 102 ntBASIC1.5□□□□□ -2.17
ATG4AQ8WYN0 AP000942.3-201ENST00000603702 160 ntBASIC1.5□□□□□ -2.17
ATG4AQ8WYN0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
ATG4AQ8WYN0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
ATG4AQ8WYN0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
ATG4AQ8WYN0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
ATG4AQ8WYN0 Y_RNA.291-201ENST00000364886 113 ntBASIC1.49□□□□□ -2.17
ATG4AQ8WYN0 MIR517C-201ENST00000385103 95 ntBASIC1.49□□□□□ -2.17
ATG4AQ8WYN0 MIRLET7F2-201ENST00000385277 83 ntBASIC1.49□□□□□ -2.17
ATG4AQ8WYN0 AC009474.2-201ENST00000451383 136 ntBASIC1.49□□□□□ -2.17
ATG4AQ8WYN0 RNU6-165P-201ENST00000517170 99 ntBASIC1.49□□□□□ -2.17
ATG4AQ8WYN0 MIR548AI-201ENST00000579940 88 ntBASIC1.49□□□□□ -2.17
ATG4AQ8WYN0 AL645939.4-201ENST00000604495 135 ntBASIC1.49□□□□□ -2.17
ATG4AQ8WYN0 MIR8055-201ENST00000610739 97 ntBASIC1.49□□□□□ -2.17
ATG4AQ8WYN0 MIR6717-201ENST00000622747 73 ntBASIC1.49□□□□□ -2.17
ATG4AQ8WYN0 MIR3914-2-201ENST00000637339 95 ntBASIC1.49□□□□□ -2.17
ATG4AQ8WYN0 Z97988.1-201ENST00000637697 135 ntBASIC1.49□□□□□ -2.17
ATG4AQ8WYN0 RNU1-42P-201ENST00000364033 160 ntBASIC1.48□□□□□ -2.17
ATG4AQ8WYN0 RNA5SP205-201ENST00000364653 136 ntBASIC1.48□□□□□ -2.17
ATG4AQ8WYN0 SNORA1.1-201ENST00000364671 133 ntBASIC1.48□□□□□ -2.17
ATG4AQ8WYN0 Y_RNA.430-201ENST00000384081 110 ntBASIC1.48□□□□□ -2.17
ATG4AQ8WYN0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
ATG4AQ8WYN0 RNA5SP144-201ENST00000410846 116 ntBASIC1.48□□□□□ -2.17
ATG4AQ8WYN0 RNA5SP136-201ENST00000410906 107 ntBASIC1.48□□□□□ -2.17
ATG4AQ8WYN0 HMGN1P33-201ENST00000432945 451 ntBASIC1.48□□□□□ -2.17
ATG4AQ8WYN0 RNU6-893P-201ENST00000458841 100 ntBASIC1.48□□□□□ -2.17
ATG4AQ8WYN0 RNU7-164P-201ENST00000459221 62 ntBASIC1.48□□□□□ -2.17
ATG4AQ8WYN0 RNU6-902P-201ENST00000517212 91 ntBASIC1.48□□□□□ -2.17
ATG4AQ8WYN0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.48□□□□□ -2.17
ATG4AQ8WYN0 MIR6841-201ENST00000637129 72 ntBASIC1.48□□□□□ -2.17
ATG4AQ8WYN0 Y_RNA.298-201ENST00000364960 107 ntBASIC1.47□□□□□ -2.17
ATG4AQ8WYN0 Y_RNA.563-201ENST00000384707 108 ntBASIC1.47□□□□□ -2.17
ATG4AQ8WYN0 SNORA67.6-201ENST00000391093 99 ntBASIC1.47□□□□□ -2.17
ATG4AQ8WYN0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.47□□□□□ -2.17
ATG4AQ8WYN0 POLR2J4-204ENST00000418424 324 ntBASIC1.47□□□□□ -2.17
ATG4AQ8WYN0 snoU13.25-201ENST00000458945 104 ntBASIC1.47□□□□□ -2.17
ATG4AQ8WYN0 RNU7-123P-201ENST00000515911 60 ntBASIC1.47□□□□□ -2.17
ATG4AQ8WYN0 RNU6-970P-201ENST00000516312 107 ntBASIC1.47□□□□□ -2.17
ATG4AQ8WYN0 RNY4P20-201ENST00000516678 93 ntBASIC1.47□□□□□ -2.17
ATG4AQ8WYN0 SNORD53B-201ENST00000577887 78 ntBASIC1.47□□□□□ -2.17
ATG4AQ8WYN0 AL121890.5-201ENST00000620848 304 ntBASIC1.47□□□□□ -2.17
ATG4AQ8WYN0 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.47□□□□□ -2.17
ATG4AQ8WYN0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
ATG4AQ8WYN0 SNORA22.1-201ENST00000362701 134 ntBASIC1.46□□□□□ -2.18
ATG4AQ8WYN0 RNU6-60P-201ENST00000364792 103 ntBASIC1.46□□□□□ -2.18
ATG4AQ8WYN0 MIR1263-201ENST00000408324 86 ntBASIC1.46□□□□□ -2.18
ATG4AQ8WYN0 Y_RNA.630-201ENST00000411370 108 ntBASIC1.46□□□□□ -2.18
ATG4AQ8WYN0 AL022718.1-201ENST00000412004 84 ntBASIC1.46□□□□□ -2.18
ATG4AQ8WYN0 RPS3AP1-201ENST00000413190 320 ntBASIC1.46□□□□□ -2.18
ATG4AQ8WYN0 AL133373.1-201ENST00000497098 94 ntBASIC1.46□□□□□ -2.18
ATG4AQ8WYN0 RNU2-35P-201ENST00000516446 142 ntBASIC1.46□□□□□ -2.18
ATG4AQ8WYN0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.46□□□□□ -2.18
ATG4AQ8WYN0 CYP3A52P-201ENST00000563326 91 ntBASIC1.46□□□□□ -2.18
ATG4AQ8WYN0 AC025166.1-201ENST00000612411 163 ntBASIC1.46□□□□□ -2.18
ATG4AQ8WYN0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.46□□□□□ -2.18
ATG4AQ8WYN0 U6.95-201ENST00000636931 70 ntBASIC1.46□□□□□ -2.18
ATG4AQ8WYN0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
ATG4AQ8WYN0 SNORA25.3-201ENST00000363205 127 ntBASIC1.45□□□□□ -2.18
ATG4AQ8WYN0 Y_RNA.346-201ENST00000365385 112 ntBASIC1.45□□□□□ -2.18
ATG4AQ8WYN0 MIR1302-7-201ENST00000408841 72 ntBASIC1.45□□□□□ -2.18
ATG4AQ8WYN0 AC108667.1-201ENST00000428618 249 ntBASIC1.45□□□□□ -2.18
ATG4AQ8WYN0 RN7SKP88-201ENST00000516847 250 ntBASIC1.45□□□□□ -2.18
ATG4AQ8WYN0 SNORA31.24-201ENST00000517232 57 ntBASIC1.45□□□□□ -2.18
ATG4AQ8WYN0 AP003716.2-201ENST00000528260 108 ntBASIC1.45□□□□□ -2.18
ATG4AQ8WYN0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.45□□□□□ -2.18
ATG4AQ8WYN0 AL359881.1-201ENST00000602916 267 ntBASIC1.45□□□□□ -2.18
ATG4AQ8WYN0 7SK.8-201ENST00000612110 250 ntBASIC1.45□□□□□ -2.18
ATG4AQ8WYN0 7SK.11-201ENST00000615477 250 ntBASIC1.45□□□□□ -2.18
ATG4AQ8WYN0 7SK.13-201ENST00000622040 250 ntBASIC1.45□□□□□ -2.18
ATG4AQ8WYN0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
ATG4AQ8WYN0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.44□□□□□ -2.18
ATG4AQ8WYN0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
ATG4AQ8WYN0 Y_RNA.338-201ENST00000365320 114 ntBASIC1.44□□□□□ -2.18
ATG4AQ8WYN0 Y_RNA.528-201ENST00000384575 108 ntBASIC1.44□□□□□ -2.18
ATG4AQ8WYN0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.44□□□□□ -2.18
ATG4AQ8WYN0 AC245047.7-201ENST00000440265 293 ntBASIC1.44□□□□□ -2.18
ATG4AQ8WYN0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.44□□□□□ -2.18
ATG4AQ8WYN0 COX6CP6-201ENST00000490840 228 ntBASIC1.44□□□□□ -2.18
ATG4AQ8WYN0 MIR4285-201ENST00000581001 85 ntBASIC1.44□□□□□ -2.18
ATG4AQ8WYN0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
ATG4AQ8WYN0 Y_RNA.354-201ENST00000365448 111 ntBASIC1.43□□□□□ -2.18
ATG4AQ8WYN0 SNORA17.3-201ENST00000391159 129 ntBASIC1.43□□□□□ -2.18
ATG4AQ8WYN0 RNU6-602P-201ENST00000411155 105 ntBASIC1.43□□□□□ -2.18
ATG4AQ8WYN0 AC090844.1-201ENST00000422019 156 ntBASIC1.43□□□□□ -2.18
ATG4AQ8WYN0 MIR7974-201ENST00000615835 79 ntBASIC1.43□□□□□ -2.18
ATG4AQ8WYN0 MIR8065-201ENST00000620577 100 ntBASIC1.43□□□□□ -2.18
ATG4AQ8WYN0 MTND5P18-201ENST00000445624 1801 ntBASIC1.43□□□□□ -2.18
ATG4AQ8WYN0 MIR103A2-201ENST00000362154 78 ntBASIC1.42□□□□□ -2.18
ATG4AQ8WYN0 RNA5SP264-201ENST00000363115 107 ntBASIC1.42□□□□□ -2.18
ATG4AQ8WYN0 Y_RNA.353-201ENST00000365440 108 ntBASIC1.42□□□□□ -2.18
ATG4AQ8WYN0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.42□□□□□ -2.18
ATG4AQ8WYN0 RNU6-1054P-201ENST00000411293 104 ntBASIC1.42□□□□□ -2.18
ATG4AQ8WYN0 AC108729.3-201ENST00000513484 108 ntBASIC1.42□□□□□ -2.18
ATG4AQ8WYN0 SNORD33.1-201ENST00000516213 88 ntBASIC1.42□□□□□ -2.18
ATG4AQ8WYN0 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.42□□□□□ -2.18
ATG4AQ8WYN0 AC004812.1-201ENST00000540773 146 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms