Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 RNU6-1081P-201ENST00000384537 107 ntBASIC1.6□□□□□ -2.15
CCHCR1Q8TD31 Y_RNA.525-201ENST00000384570 113 ntBASIC1.6□□□□□ -2.15
CCHCR1Q8TD31 SNORA22C-201ENST00000384614 134 ntBASIC1.6□□□□□ -2.15
CCHCR1Q8TD31 RNU6-1154P-201ENST00000391001 104 ntBASIC1.6□□□□□ -2.15
CCHCR1Q8TD31 MIR1302-7-201ENST00000408841 72 ntBASIC1.6□□□□□ -2.15
CCHCR1Q8TD31 POLR2J4-204ENST00000418424 324 ntBASIC1.6□□□□□ -2.15
CCHCR1Q8TD31 SNORD13-201ENST00000459299 104 ntBASIC1.6□□□□□ -2.15
CCHCR1Q8TD31 MIR4305-201ENST00000583252 102 ntBASIC1.6□□□□□ -2.15
CCHCR1Q8TD31 AC021443.1-201ENST00000604478 211 ntBASIC1.6□□□□□ -2.15
CCHCR1Q8TD31 BX248123.2-201ENST00000606318 124 ntBASIC1.6□□□□□ -2.15
CCHCR1Q8TD31 AL353997.5-201ENST00000618886 171 ntBASIC1.6□□□□□ -2.15
CCHCR1Q8TD31 MIR3914-2-201ENST00000637339 95 ntBASIC1.6□□□□□ -2.15
CCHCR1Q8TD31 Y_RNA.291-201ENST00000364886 113 ntBASIC1.59□□□□□ -2.15
CCHCR1Q8TD31 MIR320A-201ENST00000385302 82 ntBASIC1.59□□□□□ -2.15
CCHCR1Q8TD31 SNORA67.5-201ENST00000391036 107 ntBASIC1.59□□□□□ -2.15
CCHCR1Q8TD31 RNA5SP136-201ENST00000410906 107 ntBASIC1.59□□□□□ -2.15
CCHCR1Q8TD31 RNU6-1054P-201ENST00000411293 104 ntBASIC1.59□□□□□ -2.15
CCHCR1Q8TD31 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.59□□□□□ -2.15
CCHCR1Q8TD31 HMGN1P33-201ENST00000432945 451 ntBASIC1.59□□□□□ -2.15
CCHCR1Q8TD31 RNU6-893P-201ENST00000458841 100 ntBASIC1.59□□□□□ -2.15
CCHCR1Q8TD31 RNU6-947P-201ENST00000516264 106 ntBASIC1.59□□□□□ -2.15
CCHCR1Q8TD31 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.59□□□□□ -2.15
CCHCR1Q8TD31 AP000942.3-201ENST00000603702 160 ntBASIC1.59□□□□□ -2.15
CCHCR1Q8TD31 MIR7974-201ENST00000615835 79 ntBASIC1.59□□□□□ -2.15
CCHCR1Q8TD31 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.59□□□□□ -2.15
CCHCR1Q8TD31 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.59□□□□□ -2.16
CCHCR1Q8TD31 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.59□□□□□ -2.16
CCHCR1Q8TD31 RNU1-17P-201ENST00000363022 152 ntBASIC1.58□□□□□ -2.16
CCHCR1Q8TD31 Y_RNA.298-201ENST00000364960 107 ntBASIC1.58□□□□□ -2.16
CCHCR1Q8TD31 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.58□□□□□ -2.16
CCHCR1Q8TD31 RNU7-164P-201ENST00000459221 62 ntBASIC1.58□□□□□ -2.16
CCHCR1Q8TD31 RNU7-123P-201ENST00000515911 60 ntBASIC1.58□□□□□ -2.16
CCHCR1Q8TD31 RNU2-35P-201ENST00000516446 142 ntBASIC1.58□□□□□ -2.16
CCHCR1Q8TD31 RNU6-1061P-201ENST00000516530 99 ntBASIC1.58□□□□□ -2.16
CCHCR1Q8TD31 AL121890.5-201ENST00000620848 304 ntBASIC1.58□□□□□ -2.16
CCHCR1Q8TD31 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
CCHCR1Q8TD31 SNORA1.1-201ENST00000364671 133 ntBASIC1.57□□□□□ -2.16
CCHCR1Q8TD31 MIR517C-201ENST00000385103 95 ntBASIC1.57□□□□□ -2.16
CCHCR1Q8TD31 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.57□□□□□ -2.16
CCHCR1Q8TD31 RNU6-955P-201ENST00000410497 104 ntBASIC1.57□□□□□ -2.16
CCHCR1Q8TD31 Y_RNA.630-201ENST00000411370 108 ntBASIC1.57□□□□□ -2.16
CCHCR1Q8TD31 RPS3AP1-201ENST00000413190 320 ntBASIC1.57□□□□□ -2.16
CCHCR1Q8TD31 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.57□□□□□ -2.16
CCHCR1Q8TD31 RNY4P20-201ENST00000516678 93 ntBASIC1.57□□□□□ -2.16
CCHCR1Q8TD31 PRELID3BP2-201ENST00000605362 201 ntBASIC1.57□□□□□ -2.16
CCHCR1Q8TD31 SNORA22.1-201ENST00000362701 134 ntBASIC1.56□□□□□ -2.16
CCHCR1Q8TD31 MIR1304-201ENST00000408243 91 ntBASIC1.56□□□□□ -2.16
CCHCR1Q8TD31 RNU6-602P-201ENST00000411155 105 ntBASIC1.56□□□□□ -2.16
CCHCR1Q8TD31 AC025166.1-201ENST00000612411 163 ntBASIC1.56□□□□□ -2.16
CCHCR1Q8TD31 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.56□□□□□ -2.16
CCHCR1Q8TD31 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.55□□□□□ -2.16
CCHCR1Q8TD31 RNA5SP264-201ENST00000363115 107 ntBASIC1.55□□□□□ -2.16
CCHCR1Q8TD31 SNORA25.3-201ENST00000363205 127 ntBASIC1.55□□□□□ -2.16
CCHCR1Q8TD31 RNU1-42P-201ENST00000364033 160 ntBASIC1.55□□□□□ -2.16
CCHCR1Q8TD31 Y_RNA.346-201ENST00000365385 112 ntBASIC1.55□□□□□ -2.16
CCHCR1Q8TD31 SNORA67.6-201ENST00000391093 99 ntBASIC1.55□□□□□ -2.16
CCHCR1Q8TD31 MIR1263-201ENST00000408324 86 ntBASIC1.55□□□□□ -2.16
CCHCR1Q8TD31 AL022718.1-201ENST00000412004 84 ntBASIC1.55□□□□□ -2.16
CCHCR1Q8TD31 AC090844.1-201ENST00000422019 156 ntBASIC1.55□□□□□ -2.16
CCHCR1Q8TD31 RPS29P23-201ENST00000458635 123 ntBASIC1.55□□□□□ -2.16
CCHCR1Q8TD31 COX6CP6-201ENST00000490840 228 ntBASIC1.55□□□□□ -2.16
CCHCR1Q8TD31 RN7SKP88-201ENST00000516847 250 ntBASIC1.55□□□□□ -2.16
CCHCR1Q8TD31 RNU11-2P-201ENST00000516898 142 ntBASIC1.55□□□□□ -2.16
CCHCR1Q8TD31 RNU6-1258P-201ENST00000516911 111 ntBASIC1.55□□□□□ -2.16
CCHCR1Q8TD31 MIR548AI-201ENST00000579940 88 ntBASIC1.55□□□□□ -2.16
CCHCR1Q8TD31 7SK.8-201ENST00000612110 250 ntBASIC1.55□□□□□ -2.16
CCHCR1Q8TD31 7SK.11-201ENST00000615477 250 ntBASIC1.55□□□□□ -2.16
CCHCR1Q8TD31 MIR8065-201ENST00000620577 100 ntBASIC1.55□□□□□ -2.16
CCHCR1Q8TD31 7SK.13-201ENST00000622040 250 ntBASIC1.55□□□□□ -2.16
CCHCR1Q8TD31 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.55□□□□□ -2.16
CCHCR1Q8TD31 U6.95-201ENST00000636931 70 ntBASIC1.55□□□□□ -2.16
CCHCR1Q8TD31 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CCHCR1Q8TD31 SNORD115-2-201ENST00000362842 82 ntBASIC1.54□□□□□ -2.16
CCHCR1Q8TD31 SNORD115-20-201ENST00000365099 82 ntBASIC1.54□□□□□ -2.16
CCHCR1Q8TD31 Y_RNA.528-201ENST00000384575 108 ntBASIC1.54□□□□□ -2.16
CCHCR1Q8TD31 RNU6-482P-201ENST00000391068 107 ntBASIC1.54□□□□□ -2.16
CCHCR1Q8TD31 MIR1185-1-201ENST00000408598 86 ntBASIC1.54□□□□□ -2.16
CCHCR1Q8TD31 AC245047.7-201ENST00000440265 293 ntBASIC1.54□□□□□ -2.16
CCHCR1Q8TD31 AC004812.1-201ENST00000540773 146 ntBASIC1.54□□□□□ -2.16
CCHCR1Q8TD31 CYP3A52P-201ENST00000563326 91 ntBASIC1.54□□□□□ -2.16
CCHCR1Q8TD31 MTND5P18-201ENST00000445624 1801 ntBASIC1.54□□□□□ -2.16
CCHCR1Q8TD31 Y_RNA.198-201ENST00000364013 98 ntBASIC1.53□□□□□ -2.16
CCHCR1Q8TD31 Y_RNA.353-201ENST00000365440 108 ntBASIC1.53□□□□□ -2.16
CCHCR1Q8TD31 Y_RNA.354-201ENST00000365448 111 ntBASIC1.53□□□□□ -2.16
CCHCR1Q8TD31 Y_RNA.531-201ENST00000384589 121 ntBASIC1.53□□□□□ -2.16
CCHCR1Q8TD31 AL512326.2-201ENST00000426359 151 ntBASIC1.53□□□□□ -2.16
CCHCR1Q8TD31 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
CCHCR1Q8TD31 RNU6-834P-201ENST00000362367 110 ntBASIC1.52□□□□□ -2.17
CCHCR1Q8TD31 Y_RNA.171-201ENST00000363760 102 ntBASIC1.52□□□□□ -2.17
CCHCR1Q8TD31 RNU6-60P-201ENST00000364792 103 ntBASIC1.52□□□□□ -2.17
CCHCR1Q8TD31 RNU6-396P-201ENST00000365369 105 ntBASIC1.52□□□□□ -2.17
CCHCR1Q8TD31 SNORD38B-201ENST00000384690 67 ntBASIC1.52□□□□□ -2.17
CCHCR1Q8TD31 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.52□□□□□ -2.17
CCHCR1Q8TD31 AC113410.1-201ENST00000505029 247 ntBASIC1.52□□□□□ -2.17
CCHCR1Q8TD31 SNORA31.24-201ENST00000517232 57 ntBASIC1.52□□□□□ -2.17
CCHCR1Q8TD31 AL359881.1-201ENST00000602916 267 ntBASIC1.52□□□□□ -2.17
CCHCR1Q8TD31 SNORD38B-202ENST00000625943 69 ntBASIC1.52□□□□□ -2.17
CCHCR1Q8TD31 MIR103A2-201ENST00000362154 78 ntBASIC1.51□□□□□ -2.17
CCHCR1Q8TD31 RNA5SP99-201ENST00000364020 114 ntBASIC1.51□□□□□ -2.17
CCHCR1Q8TD31 RNU6-1104P-201ENST00000384723 104 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 210.2 ms