Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC020891.4-201ENST00000605745 93 ntBASIC2.49□□□□□ -2.01
SHKBP1Q8TBC3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SHKBP1Q8TBC3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SHKBP1Q8TBC3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SHKBP1Q8TBC3 RNU1-58P-201ENST00000362413 163 ntBASIC2.48□□□□□ -2.01
SHKBP1Q8TBC3 RNU1-109P-201ENST00000383960 147 ntBASIC2.48□□□□□ -2.01
SHKBP1Q8TBC3 RNU6-950P-201ENST00000384651 107 ntBASIC2.48□□□□□ -2.01
SHKBP1Q8TBC3 RNU6-1031P-201ENST00000384773 107 ntBASIC2.48□□□□□ -2.01
SHKBP1Q8TBC3 AC245047.7-201ENST00000440265 293 ntBASIC2.48□□□□□ -2.01
SHKBP1Q8TBC3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.48□□□□□ -2.01
SHKBP1Q8TBC3 SNORD67.1-201ENST00000516618 108 ntBASIC2.48□□□□□ -2.01
SHKBP1Q8TBC3 MIR5094-201ENST00000578766 85 ntBASIC2.48□□□□□ -2.01
SHKBP1Q8TBC3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.48□□□□□ -2.01
SHKBP1Q8TBC3 RNU6-90P-201ENST00000606352 106 ntBASIC2.48□□□□□ -2.01
SHKBP1Q8TBC3 MIR8055-201ENST00000610739 97 ntBASIC2.48□□□□□ -2.01
SHKBP1Q8TBC3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.48□□□□□ -2.01
SHKBP1Q8TBC3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SHKBP1Q8TBC3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SHKBP1Q8TBC3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SHKBP1Q8TBC3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SHKBP1Q8TBC3 Y_RNA.173-201ENST00000363776 113 ntBASIC2.47□□□□□ -2.01
SHKBP1Q8TBC3 RNU1-51P-201ENST00000365345 176 ntBASIC2.47□□□□□ -2.01
SHKBP1Q8TBC3 Y_RNA.448-201ENST00000384185 108 ntBASIC2.47□□□□□ -2.01
SHKBP1Q8TBC3 AC140658.3-201ENST00000567603 271 ntBASIC2.47□□□□□ -2.01
SHKBP1Q8TBC3 AL513043.2-201ENST00000573941 143 ntBASIC2.47□□□□□ -2.01
SHKBP1Q8TBC3 MIR1273D-201ENST00000577266 86 ntBASIC2.47□□□□□ -2.01
SHKBP1Q8TBC3 AC026271.5-201ENST00000577873 130 ntBASIC2.47□□□□□ -2.01
SHKBP1Q8TBC3 AC145423.2-201ENST00000610631 239 ntBASIC2.47□□□□□ -2.01
SHKBP1Q8TBC3 MIR8065-201ENST00000620577 100 ntBASIC2.47□□□□□ -2.01
SHKBP1Q8TBC3 RNU6-865P-201ENST00000364772 107 ntBASIC2.46□□□□□ -2.02
SHKBP1Q8TBC3 Y_RNA.537-201ENST00000384626 109 ntBASIC2.46□□□□□ -2.02
SHKBP1Q8TBC3 MIR526A1-201ENST00000384897 85 ntBASIC2.46□□□□□ -2.02
SHKBP1Q8TBC3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SHKBP1Q8TBC3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.46□□□□□ -2.02
SHKBP1Q8TBC3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.46□□□□□ -2.02
SHKBP1Q8TBC3 AC022202.1-201ENST00000613515 211 ntBASIC2.46□□□□□ -2.02
SHKBP1Q8TBC3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SHKBP1Q8TBC3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.45□□□□□ -2.02
SHKBP1Q8TBC3 SNORD56.5-201ENST00000364281 72 ntBASIC2.45□□□□□ -2.02
SHKBP1Q8TBC3 RNU6-1321P-201ENST00000390905 107 ntBASIC2.45□□□□□ -2.02
SHKBP1Q8TBC3 BX510359.4-201ENST00000423750 193 ntBASIC2.45□□□□□ -2.02
SHKBP1Q8TBC3 snoU13.16-201ENST00000459350 104 ntBASIC2.45□□□□□ -2.02
SHKBP1Q8TBC3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.45□□□□□ -2.02
SHKBP1Q8TBC3 FAM106DP-201ENST00000586416 501 ntBASIC2.45□□□□□ -2.02
SHKBP1Q8TBC3 MIR7843-201ENST00000622274 79 ntBASIC2.45□□□□□ -2.02
SHKBP1Q8TBC3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
SHKBP1Q8TBC3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
SHKBP1Q8TBC3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
SHKBP1Q8TBC3 MIR21-201ENST00000362134 72 ntBASIC2.44□□□□□ -2.02
SHKBP1Q8TBC3 RNU1-91P-201ENST00000364746 163 ntBASIC2.44□□□□□ -2.02
SHKBP1Q8TBC3 MIR181B2-201ENST00000385004 89 ntBASIC2.44□□□□□ -2.02
SHKBP1Q8TBC3 MIR29C-201ENST00000385231 88 ntBASIC2.44□□□□□ -2.02
SHKBP1Q8TBC3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SHKBP1Q8TBC3 UBBP3-201ENST00000445497 241 ntBASIC2.44□□□□□ -2.02
SHKBP1Q8TBC3 SPINT5P-201ENST00000448174 155 ntBASIC2.44□□□□□ -2.02
SHKBP1Q8TBC3 RNU7-79P-201ENST00000516082 62 ntBASIC2.44□□□□□ -2.02
SHKBP1Q8TBC3 RNU7-137P-201ENST00000516788 62 ntBASIC2.44□□□□□ -2.02
SHKBP1Q8TBC3 AC067747.1-201ENST00000608026 250 ntBASIC2.44□□□□□ -2.02
SHKBP1Q8TBC3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SHKBP1Q8TBC3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.43□□□□□ -2.02
SHKBP1Q8TBC3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.43□□□□□ -2.02
SHKBP1Q8TBC3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
SHKBP1Q8TBC3 SNORD114-10-201ENST00000363409 72 ntBASIC2.43□□□□□ -2.02
SHKBP1Q8TBC3 RNU6-1086P-201ENST00000410930 100 ntBASIC2.43□□□□□ -2.02
SHKBP1Q8TBC3 RNA5SP492-201ENST00000411330 114 ntBASIC2.43□□□□□ -2.02
SHKBP1Q8TBC3 MIR5007-201ENST00000583098 95 ntBASIC2.43□□□□□ -2.02
SHKBP1Q8TBC3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.43□□□□□ -2.02
SHKBP1Q8TBC3 AC105081.1-201ENST00000617727 106 ntBASIC2.43□□□□□ -2.02
SHKBP1Q8TBC3 AC012676.2-201ENST00000619258 186 ntBASIC2.43□□□□□ -2.02
SHKBP1Q8TBC3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
SHKBP1Q8TBC3 RNU6-315P-201ENST00000362666 107 ntBASIC2.42□□□□□ -2.02
SHKBP1Q8TBC3 MIR504-201ENST00000385065 83 ntBASIC2.42□□□□□ -2.02
SHKBP1Q8TBC3 RNU6-447P-201ENST00000410293 104 ntBASIC2.42□□□□□ -2.02
SHKBP1Q8TBC3 RNU6-1118P-201ENST00000410382 104 ntBASIC2.42□□□□□ -2.02
SHKBP1Q8TBC3 RNU6-1076P-201ENST00000410397 104 ntBASIC2.42□□□□□ -2.02
SHKBP1Q8TBC3 RNU6-355P-201ENST00000410427 104 ntBASIC2.42□□□□□ -2.02
SHKBP1Q8TBC3 RNU6-791P-201ENST00000410467 104 ntBASIC2.42□□□□□ -2.02
SHKBP1Q8TBC3 RNU6-705P-201ENST00000410601 104 ntBASIC2.42□□□□□ -2.02
SHKBP1Q8TBC3 RNU6-1100P-201ENST00000410691 104 ntBASIC2.42□□□□□ -2.02
SHKBP1Q8TBC3 RNU6-860P-201ENST00000410860 104 ntBASIC2.42□□□□□ -2.02
SHKBP1Q8TBC3 RNU6-1217P-201ENST00000411276 104 ntBASIC2.42□□□□□ -2.02
SHKBP1Q8TBC3 RNU6-785P-201ENST00000411324 104 ntBASIC2.42□□□□□ -2.02
SHKBP1Q8TBC3 AC090255.1-201ENST00000495779 349 ntBASIC2.42□□□□□ -2.02
SHKBP1Q8TBC3 SNORA31.15-201ENST00000516771 132 ntBASIC2.42□□□□□ -2.02
SHKBP1Q8TBC3 U6.90-201ENST00000614007 104 ntBASIC2.42□□□□□ -2.02
SHKBP1Q8TBC3 U6.70-201ENST00000620287 104 ntBASIC2.42□□□□□ -2.02
SHKBP1Q8TBC3 Z97988.1-201ENST00000637697 135 ntBASIC2.42□□□□□ -2.02
SHKBP1Q8TBC3 AC080100.1-201ENST00000624239 5356 ntBASIC2.42□□□□□ -2.02
SHKBP1Q8TBC3 SNORD115-37-201ENST00000363768 82 ntBASIC2.41□□□□□ -2.02
SHKBP1Q8TBC3 RNA5SP138-201ENST00000365098 114 ntBASIC2.41□□□□□ -2.02
SHKBP1Q8TBC3 Y_RNA.354-201ENST00000365448 111 ntBASIC2.41□□□□□ -2.02
SHKBP1Q8TBC3 RNU6-1067P-201ENST00000384752 107 ntBASIC2.41□□□□□ -2.02
SHKBP1Q8TBC3 MIR597-201ENST00000384968 97 ntBASIC2.41□□□□□ -2.02
SHKBP1Q8TBC3 RNU7-48P-201ENST00000458875 63 ntBASIC2.41□□□□□ -2.02
SHKBP1Q8TBC3 SNORA31.11-201ENST00000516528 139 ntBASIC2.41□□□□□ -2.02
SHKBP1Q8TBC3 AL049779.4-201ENST00000604500 156 ntBASIC2.41□□□□□ -2.02
SHKBP1Q8TBC3 AC021506.2-201ENST00000612354 169 ntBASIC2.41□□□□□ -2.02
SHKBP1Q8TBC3 AL513423.1-201ENST00000621695 132 ntBASIC2.41□□□□□ -2.02
SHKBP1Q8TBC3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.41□□□□□ -2.02
SHKBP1Q8TBC3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms