Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.75□□□□□ -2.29
LINC01006Q8NI28 MIR548I3-201ENST00000408378 149 ntBASIC0.75□□□□□ -2.29
LINC01006Q8NI28 AL035398.1-201ENST00000430869 322 ntBASIC0.75□□□□□ -2.29
LINC01006Q8NI28 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.75□□□□□ -2.29
LINC01006Q8NI28 RNU7-73P-201ENST00000458743 63 ntBASIC0.75□□□□□ -2.29
LINC01006Q8NI28 snoU13.16-201ENST00000459350 104 ntBASIC0.75□□□□□ -2.29
LINC01006Q8NI28 RNU7-96P-201ENST00000459535 64 ntBASIC0.75□□□□□ -2.29
LINC01006Q8NI28 SNORD124-201ENST00000459577 104 ntBASIC0.75□□□□□ -2.29
LINC01006Q8NI28 RNU7-53P-201ENST00000516705 60 ntBASIC0.75□□□□□ -2.29
LINC01006Q8NI28 Y_RNA.700-201ENST00000516806 100 ntBASIC0.75□□□□□ -2.29
LINC01006Q8NI28 RNU6-1149P-201ENST00000516810 97 ntBASIC0.75□□□□□ -2.29
LINC01006Q8NI28 SCARNA15-202ENST00000516881 127 ntBASIC0.75□□□□□ -2.29
LINC01006Q8NI28 MIR3671-201ENST00000580455 88 ntBASIC0.75□□□□□ -2.29
LINC01006Q8NI28 AC091932.4-201ENST00000623386 200 ntBASIC0.75□□□□□ -2.29
LINC01006Q8NI28 MTND5P32-201ENST00000560711 1802 ntBASIC0.75□□□□□ -2.29
LINC01006Q8NI28 Y_RNA.150-201ENST00000363562 102 ntBASIC0.74□□□□□ -2.29
LINC01006Q8NI28 RNU4-84P-201ENST00000364200 139 ntBASIC0.74□□□□□ -2.29
LINC01006Q8NI28 SNORA25.7-201ENST00000364375 127 ntBASIC0.74□□□□□ -2.29
LINC01006Q8NI28 RNU6-597P-201ENST00000365620 102 ntBASIC0.74□□□□□ -2.29
LINC01006Q8NI28 MIR624-201ENST00000385217 97 ntBASIC0.74□□□□□ -2.29
LINC01006Q8NI28 RNU6-205P-201ENST00000390858 107 ntBASIC0.74□□□□□ -2.29
LINC01006Q8NI28 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.74□□□□□ -2.29
LINC01006Q8NI28 RPS29P28-201ENST00000446439 141 ntBASIC0.74□□□□□ -2.29
LINC01006Q8NI28 RNU7-90P-201ENST00000459216 62 ntBASIC0.74□□□□□ -2.29
LINC01006Q8NI28 OR2A41P-201ENST00000473586 105 ntBASIC0.74□□□□□ -2.29
LINC01006Q8NI28 Y_RNA.662-201ENST00000516028 97 ntBASIC0.74□□□□□ -2.29
LINC01006Q8NI28 CYP3A137P-201ENST00000562436 69 ntBASIC0.74□□□□□ -2.29
LINC01006Q8NI28 MIR5000-201ENST00000577717 103 ntBASIC0.74□□□□□ -2.29
LINC01006Q8NI28 AC131055.1-201ENST00000584626 316 ntBASIC0.74□□□□□ -2.29
LINC01006Q8NI28 HSPE1P19-201ENST00000603327 295 ntBASIC0.74□□□□□ -2.29
LINC01006Q8NI28 AL020996.3-201ENST00000606617 222 ntBASIC0.74□□□□□ -2.29
LINC01006Q8NI28 RNU6-94P-201ENST00000607728 107 ntBASIC0.74□□□□□ -2.29
LINC01006Q8NI28 AL391516.1-201ENST00000554380 2449 ntBASIC0.74□□□□□ -2.29
LINC01006Q8NI28 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
LINC01006Q8NI28 AL596211.1-201ENST00000569873 2277 ntBASIC0.73□□□□□ -2.29
LINC01006Q8NI28 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.73□□□□□ -2.29
LINC01006Q8NI28 Y_RNA.52-201ENST00000362760 96 ntBASIC0.73□□□□□ -2.29
LINC01006Q8NI28 SNORD114-26-201ENST00000363543 72 ntBASIC0.73□□□□□ -2.29
LINC01006Q8NI28 RNU6-818P-201ENST00000364837 108 ntBASIC0.73□□□□□ -2.29
LINC01006Q8NI28 RNU6-396P-201ENST00000365369 105 ntBASIC0.73□□□□□ -2.29
LINC01006Q8NI28 RNU6-239P-201ENST00000390990 99 ntBASIC0.73□□□□□ -2.29
LINC01006Q8NI28 PCNPP3-201ENST00000393579 471 ntBASIC0.73□□□□□ -2.29
LINC01006Q8NI28 RNU6-613P-201ENST00000410412 108 ntBASIC0.73□□□□□ -2.29
LINC01006Q8NI28 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.73□□□□□ -2.29
LINC01006Q8NI28 MIR2115-201ENST00000516657 100 ntBASIC0.73□□□□□ -2.29
LINC01006Q8NI28 RNU6-794P-201ENST00000517261 64 ntBASIC0.73□□□□□ -2.29
LINC01006Q8NI28 AC036111.3-201ENST00000526389 112 ntBASIC0.73□□□□□ -2.29
LINC01006Q8NI28 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.73□□□□□ -2.29
LINC01006Q8NI28 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
LINC01006Q8NI28 Y_RNA.337-201ENST00000365312 102 ntBASIC0.72□□□□□ -2.29
LINC01006Q8NI28 Y_RNA.357-201ENST00000365487 109 ntBASIC0.72□□□□□ -2.29
LINC01006Q8NI28 SNORA2B-201ENST00000384583 137 ntBASIC0.72□□□□□ -2.29
LINC01006Q8NI28 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
LINC01006Q8NI28 RNU6-588P-201ENST00000410281 105 ntBASIC0.72□□□□□ -2.29
LINC01006Q8NI28 RNU6-1135P-201ENST00000411083 103 ntBASIC0.72□□□□□ -2.29
LINC01006Q8NI28 MRPL35P3-201ENST00000421557 364 ntBASIC0.72□□□□□ -2.29
LINC01006Q8NI28 AC244023.1-201ENST00000426884 112 ntBASIC0.72□□□□□ -2.29
LINC01006Q8NI28 AC108059.2-201ENST00000434626 151 ntBASIC0.72□□□□□ -2.29
LINC01006Q8NI28 snoU13.21-201ENST00000459368 105 ntBASIC0.72□□□□□ -2.29
LINC01006Q8NI28 RNA5SP436-201ENST00000516020 115 ntBASIC0.72□□□□□ -2.29
LINC01006Q8NI28 RNU7-121P-201ENST00000516604 62 ntBASIC0.72□□□□□ -2.29
LINC01006Q8NI28 RNU11-2P-201ENST00000516898 142 ntBASIC0.72□□□□□ -2.29
LINC01006Q8NI28 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.72□□□□□ -2.29
LINC01006Q8NI28 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.72□□□□□ -2.29
LINC01006Q8NI28 AC242498.1-201ENST00000604134 111 ntBASIC0.72□□□□□ -2.29
LINC01006Q8NI28 MIR8055-201ENST00000610739 97 ntBASIC0.72□□□□□ -2.29
LINC01006Q8NI28 AC104465.1-201ENST00000611365 139 ntBASIC0.72□□□□□ -2.29
LINC01006Q8NI28 FTX_2.1-201ENST00000618816 94 ntBASIC0.72□□□□□ -2.29
LINC01006Q8NI28 AC012676.2-201ENST00000619258 186 ntBASIC0.72□□□□□ -2.29
LINC01006Q8NI28 Z97988.1-201ENST00000637697 135 ntBASIC0.72□□□□□ -2.29
LINC01006Q8NI28 MIR302B-201ENST00000362188 73 ntBASIC0.71□□□□□ -2.3
LINC01006Q8NI28 SNORA1.1-201ENST00000364671 133 ntBASIC0.71□□□□□ -2.3
LINC01006Q8NI28 Y_RNA.272-201ENST00000364696 102 ntBASIC0.71□□□□□ -2.3
LINC01006Q8NI28 RNU4-16P-201ENST00000364737 141 ntBASIC0.71□□□□□ -2.3
LINC01006Q8NI28 RNU6-1130P-201ENST00000365434 107 ntBASIC0.71□□□□□ -2.3
LINC01006Q8NI28 Y_RNA.441-201ENST00000384123 112 ntBASIC0.71□□□□□ -2.3
LINC01006Q8NI28 SNORA26.6-201ENST00000391256 115 ntBASIC0.71□□□□□ -2.3
LINC01006Q8NI28 RNU2-64P-201ENST00000411315 191 ntBASIC0.71□□□□□ -2.3
LINC01006Q8NI28 AC015818.7-201ENST00000428754 109 ntBASIC0.71□□□□□ -2.3
LINC01006Q8NI28 AC087499.7-201ENST00000441958 109 ntBASIC0.71□□□□□ -2.3
LINC01006Q8NI28 RNU6-182P-201ENST00000516970 105 ntBASIC0.71□□□□□ -2.3
LINC01006Q8NI28 MIR4698-201ENST00000577795 80 ntBASIC0.71□□□□□ -2.3
LINC01006Q8NI28 uc_338.6-201ENST00000613544 171 ntBASIC0.71□□□□□ -2.3
LINC01006Q8NI28 Y_RNA.36-201ENST00000362602 112 ntBASIC0.7□□□□□ -2.3
LINC01006Q8NI28 RNU1-133P-201ENST00000364867 167 ntBASIC0.7□□□□□ -2.3
LINC01006Q8NI28 SNORA75.5-201ENST00000391291 81 ntBASIC0.7□□□□□ -2.3
LINC01006Q8NI28 RNU6-602P-201ENST00000411155 105 ntBASIC0.7□□□□□ -2.3
LINC01006Q8NI28 RNU7-80P-201ENST00000459562 61 ntBASIC0.7□□□□□ -2.3
LINC01006Q8NI28 RNU2-60P-201ENST00000517290 128 ntBASIC0.7□□□□□ -2.3
LINC01006Q8NI28 AC106800.4-201ENST00000614905 153 ntBASIC0.7□□□□□ -2.3
LINC01006Q8NI28 MIR6717-201ENST00000622747 73 ntBASIC0.7□□□□□ -2.3
LINC01006Q8NI28 MIR6844-201ENST00000637122 62 ntBASIC0.7□□□□□ -2.3
LINC01006Q8NI28 MIR377-201ENST00000362145 69 ntBASIC0.69□□□□□ -2.3
LINC01006Q8NI28 RNU6-508P-201ENST00000363231 103 ntBASIC0.69□□□□□ -2.3
LINC01006Q8NI28 Y_RNA.168-201ENST00000363740 102 ntBASIC0.69□□□□□ -2.3
LINC01006Q8NI28 SNORD113.3-201ENST00000364630 78 ntBASIC0.69□□□□□ -2.3
LINC01006Q8NI28 SNORD114-24-201ENST00000365029 72 ntBASIC0.69□□□□□ -2.3
LINC01006Q8NI28 SNORA22-201ENST00000383907 134 ntBASIC0.69□□□□□ -2.3
LINC01006Q8NI28 RNU6-804P-201ENST00000384286 107 ntBASIC0.69□□□□□ -2.3
LINC01006Q8NI28 Y_RNA.497-201ENST00000384447 98 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms