Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 SNORD38.1-201ENST00000363863 68 ntBASIC2.51□□□□□ -2.01
DEPDC4Q8N2C3 RNU6-820P-201ENST00000384273 107 ntBASIC2.51□□□□□ -2.01
DEPDC4Q8N2C3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
DEPDC4Q8N2C3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
DEPDC4Q8N2C3 RNU6-972P-201ENST00000391208 107 ntBASIC2.51□□□□□ -2.01
DEPDC4Q8N2C3 MIR1261-201ENST00000408659 82 ntBASIC2.51□□□□□ -2.01
DEPDC4Q8N2C3 AC087499.2-201ENST00000432861 149 ntBASIC2.51□□□□□ -2.01
DEPDC4Q8N2C3 RNU6-1006P-201ENST00000516998 103 ntBASIC2.51□□□□□ -2.01
DEPDC4Q8N2C3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
DEPDC4Q8N2C3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
DEPDC4Q8N2C3 RNU4-82P-201ENST00000362443 140 ntBASIC2.5□□□□□ -2.01
DEPDC4Q8N2C3 MIR450A2-201ENST00000385022 100 ntBASIC2.5□□□□□ -2.01
DEPDC4Q8N2C3 RNA5SP184-201ENST00000411071 108 ntBASIC2.5□□□□□ -2.01
DEPDC4Q8N2C3 AL445685.2-201ENST00000422551 342 ntBASIC2.5□□□□□ -2.01
DEPDC4Q8N2C3 AL139132.1-201ENST00000431587 344 ntBASIC2.5□□□□□ -2.01
DEPDC4Q8N2C3 HSPE1P24-201ENST00000450782 238 ntBASIC2.5□□□□□ -2.01
DEPDC4Q8N2C3 SNORD67.1-201ENST00000516618 108 ntBASIC2.5□□□□□ -2.01
DEPDC4Q8N2C3 RNU6-922P-201ENST00000516753 99 ntBASIC2.5□□□□□ -2.01
DEPDC4Q8N2C3 RNU7-137P-201ENST00000516788 62 ntBASIC2.5□□□□□ -2.01
DEPDC4Q8N2C3 U7.3-201ENST00000616123 62 ntBASIC2.5□□□□□ -2.01
DEPDC4Q8N2C3 AC091304.10-201ENST00000641554 121 ntBASIC2.5□□□□□ -2.01
DEPDC4Q8N2C3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
DEPDC4Q8N2C3 MIR6073-201ENST00000352083 89 ntBASIC2.49□□□□□ -2.01
DEPDC4Q8N2C3 AC019129.1-201ENST00000403786 261 ntBASIC2.49□□□□□ -2.01
DEPDC4Q8N2C3 RNU2-40P-201ENST00000410833 196 ntBASIC2.49□□□□□ -2.01
DEPDC4Q8N2C3 RPL31P63-201ENST00000422565 375 ntBASIC2.49□□□□□ -2.01
DEPDC4Q8N2C3 UBL5P1-201ENST00000507979 193 ntBASIC2.49□□□□□ -2.01
DEPDC4Q8N2C3 MIR4287-201ENST00000579398 78 ntBASIC2.49□□□□□ -2.01
DEPDC4Q8N2C3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.49□□□□□ -2.01
DEPDC4Q8N2C3 AC067747.1-201ENST00000608026 250 ntBASIC2.49□□□□□ -2.01
DEPDC4Q8N2C3 AL137847.3-201ENST00000611521 109 ntBASIC2.49□□□□□ -2.01
DEPDC4Q8N2C3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
DEPDC4Q8N2C3 Y_RNA.140-201ENST00000363474 103 ntBASIC2.48□□□□□ -2.01
DEPDC4Q8N2C3 RNU6-865P-201ENST00000364772 107 ntBASIC2.48□□□□□ -2.01
DEPDC4Q8N2C3 RNU6-887P-201ENST00000410660 100 ntBASIC2.48□□□□□ -2.01
DEPDC4Q8N2C3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.48□□□□□ -2.01
DEPDC4Q8N2C3 AL590808.1-201ENST00000618696 141 ntBASIC2.48□□□□□ -2.01
DEPDC4Q8N2C3 WWP1P1-201ENST00000466609 2769 ntBASIC2.48□□□□□ -2.01
DEPDC4Q8N2C3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
DEPDC4Q8N2C3 RNA5SP237-201ENST00000410414 113 ntBASIC2.47□□□□□ -2.01
DEPDC4Q8N2C3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.47□□□□□ -2.01
DEPDC4Q8N2C3 RNU6-237P-201ENST00000515985 71 ntBASIC2.47□□□□□ -2.01
DEPDC4Q8N2C3 MIR4319-201ENST00000577285 85 ntBASIC2.47□□□□□ -2.01
DEPDC4Q8N2C3 MIR4299-201ENST00000577899 72 ntBASIC2.47□□□□□ -2.01
DEPDC4Q8N2C3 MIR548Z-201ENST00000584743 97 ntBASIC2.47□□□□□ -2.01
DEPDC4Q8N2C3 MIR3192-201ENST00000584920 77 ntBASIC2.47□□□□□ -2.01
DEPDC4Q8N2C3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.47□□□□□ -2.01
DEPDC4Q8N2C3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.47□□□□□ -2.01
DEPDC4Q8N2C3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
DEPDC4Q8N2C3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
DEPDC4Q8N2C3 Y_RNA.98-201ENST00000363109 102 ntBASIC2.46□□□□□ -2.02
DEPDC4Q8N2C3 RNY1P13-201ENST00000365030 105 ntBASIC2.46□□□□□ -2.02
DEPDC4Q8N2C3 RNU6-1134P-201ENST00000365156 101 ntBASIC2.46□□□□□ -2.02
DEPDC4Q8N2C3 Y_RNA.388-201ENST00000383919 113 ntBASIC2.46□□□□□ -2.02
DEPDC4Q8N2C3 Y_RNA.448-201ENST00000384185 108 ntBASIC2.46□□□□□ -2.02
DEPDC4Q8N2C3 RNU6-1307P-201ENST00000391012 103 ntBASIC2.46□□□□□ -2.02
DEPDC4Q8N2C3 RPS12P2-201ENST00000439728 269 ntBASIC2.46□□□□□ -2.02
DEPDC4Q8N2C3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.46□□□□□ -2.02
DEPDC4Q8N2C3 MIR5092-201ENST00000583139 88 ntBASIC2.46□□□□□ -2.02
DEPDC4Q8N2C3 PRELID3BP2-201ENST00000605362 201 ntBASIC2.46□□□□□ -2.02
DEPDC4Q8N2C3 AL096861.1-201ENST00000610899 123 ntBASIC2.46□□□□□ -2.02
DEPDC4Q8N2C3 AL662814.1-201ENST00000617364 121 ntBASIC2.46□□□□□ -2.02
DEPDC4Q8N2C3 AC062016.1-201ENST00000355719 319 ntBASIC2.45□□□□□ -2.02
DEPDC4Q8N2C3 RNU6-396P-201ENST00000365369 105 ntBASIC2.45□□□□□ -2.02
DEPDC4Q8N2C3 RNU6-813P-201ENST00000384691 107 ntBASIC2.45□□□□□ -2.02
DEPDC4Q8N2C3 MIR34C-201ENST00000384831 77 ntBASIC2.45□□□□□ -2.02
DEPDC4Q8N2C3 RNA5SP181-201ENST00000410246 98 ntBASIC2.45□□□□□ -2.02
DEPDC4Q8N2C3 RPS29P28-201ENST00000446439 141 ntBASIC2.45□□□□□ -2.02
DEPDC4Q8N2C3 snoU13.2-201ENST00000459201 104 ntBASIC2.45□□□□□ -2.02
DEPDC4Q8N2C3 RN7SKP12-201ENST00000516275 143 ntBASIC2.45□□□□□ -2.02
DEPDC4Q8N2C3 SNORA31.11-201ENST00000516528 139 ntBASIC2.45□□□□□ -2.02
DEPDC4Q8N2C3 RNA5SP82-201ENST00000516707 92 ntBASIC2.45□□□□□ -2.02
DEPDC4Q8N2C3 AC141846.1-201ENST00000568348 142 ntBASIC2.45□□□□□ -2.02
DEPDC4Q8N2C3 AC062037.1-201ENST00000605302 128 ntBASIC2.45□□□□□ -2.02
DEPDC4Q8N2C3 MIR376B-201ENST00000614515 100 ntBASIC2.45□□□□□ -2.02
DEPDC4Q8N2C3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
DEPDC4Q8N2C3 SNORD38.2-201ENST00000384470 69 ntBASIC2.44□□□□□ -2.02
DEPDC4Q8N2C3 MIR196B-201ENST00000384852 84 ntBASIC2.44□□□□□ -2.02
DEPDC4Q8N2C3 MT-TN-201ENST00000387400 73 ntBASIC2.44□□□□□ -2.02
DEPDC4Q8N2C3 RNU6-1321P-201ENST00000390905 107 ntBASIC2.44□□□□□ -2.02
DEPDC4Q8N2C3 RNA5SP210-201ENST00000391034 120 ntBASIC2.44□□□□□ -2.02
DEPDC4Q8N2C3 MIR1302-7-201ENST00000408841 72 ntBASIC2.44□□□□□ -2.02
DEPDC4Q8N2C3 RNA5SP508-201ENST00000411327 119 ntBASIC2.44□□□□□ -2.02
DEPDC4Q8N2C3 AC244023.1-201ENST00000426884 112 ntBASIC2.44□□□□□ -2.02
DEPDC4Q8N2C3 RPL39P39-201ENST00000455840 151 ntBASIC2.44□□□□□ -2.02
DEPDC4Q8N2C3 RNU7-48P-201ENST00000458875 63 ntBASIC2.44□□□□□ -2.02
DEPDC4Q8N2C3 MIR4635-201ENST00000583759 79 ntBASIC2.44□□□□□ -2.02
DEPDC4Q8N2C3 AP000942.3-201ENST00000603702 160 ntBASIC2.44□□□□□ -2.02
DEPDC4Q8N2C3 AC242498.1-201ENST00000604134 111 ntBASIC2.44□□□□□ -2.02
DEPDC4Q8N2C3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.44□□□□□ -2.02
DEPDC4Q8N2C3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
DEPDC4Q8N2C3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
DEPDC4Q8N2C3 SNORD116-10-201ENST00000363791 102 ntBASIC2.43□□□□□ -2.02
DEPDC4Q8N2C3 Y_RNA.247-201ENST00000364500 92 ntBASIC2.43□□□□□ -2.02
DEPDC4Q8N2C3 Y_RNA.467-201ENST00000384297 102 ntBASIC2.43□□□□□ -2.02
DEPDC4Q8N2C3 AC109327.2-201ENST00000448339 378 ntBASIC2.43□□□□□ -2.02
DEPDC4Q8N2C3 AC108938.1-201ENST00000451204 136 ntBASIC2.43□□□□□ -2.02
DEPDC4Q8N2C3 RNU11-2P-201ENST00000516898 142 ntBASIC2.43□□□□□ -2.02
DEPDC4Q8N2C3 SNORA44.1-201ENST00000517031 108 ntBASIC2.43□□□□□ -2.02
DEPDC4Q8N2C3 RNA5SP402-201ENST00000517148 110 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 219.2 ms