Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC005908.1-201ENST00000468701 347 ntBASIC1.91□□□□□ -2.1
TRIM48Q8IWZ4 AC015688.6-201ENST00000577737 104 ntBASIC1.91□□□□□ -2.1
TRIM48Q8IWZ4 MIR8063-201ENST00000621930 81 ntBASIC1.91□□□□□ -2.1
TRIM48Q8IWZ4 MIR1255B1-201ENST00000636325 63 ntBASIC1.91□□□□□ -2.1
TRIM48Q8IWZ4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
TRIM48Q8IWZ4 RNU6-816P-201ENST00000390914 107 ntBASIC1.9□□□□□ -2.11
TRIM48Q8IWZ4 RNU6-1268P-201ENST00000391214 107 ntBASIC1.9□□□□□ -2.11
TRIM48Q8IWZ4 RNU6-1239P-201ENST00000391310 107 ntBASIC1.9□□□□□ -2.11
TRIM48Q8IWZ4 RNU4-69P-201ENST00000410677 143 ntBASIC1.9□□□□□ -2.11
TRIM48Q8IWZ4 RPL39P25-201ENST00000449384 154 ntBASIC1.9□□□□□ -2.11
TRIM48Q8IWZ4 MIR1270-201ENST00000459320 83 ntBASIC1.9□□□□□ -2.11
TRIM48Q8IWZ4 MIR3935-201ENST00000583472 104 ntBASIC1.9□□□□□ -2.11
TRIM48Q8IWZ4 MIR3192-201ENST00000584920 77 ntBASIC1.9□□□□□ -2.11
TRIM48Q8IWZ4 RNU6-94P-201ENST00000607728 107 ntBASIC1.9□□□□□ -2.11
TRIM48Q8IWZ4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TRIM48Q8IWZ4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.11
TRIM48Q8IWZ4 RNU6-1298P-201ENST00000362456 101 ntBASIC1.89□□□□□ -2.11
TRIM48Q8IWZ4 SNORD115-2-201ENST00000362842 82 ntBASIC1.89□□□□□ -2.11
TRIM48Q8IWZ4 SNORD115-20-201ENST00000365099 82 ntBASIC1.89□□□□□ -2.11
TRIM48Q8IWZ4 Y_RNA.430-201ENST00000384081 110 ntBASIC1.89□□□□□ -2.11
TRIM48Q8IWZ4 SNORA19.1-201ENST00000410656 129 ntBASIC1.89□□□□□ -2.11
TRIM48Q8IWZ4 AC009474.2-201ENST00000451383 136 ntBASIC1.89□□□□□ -2.11
TRIM48Q8IWZ4 RNU6-947P-201ENST00000516264 106 ntBASIC1.89□□□□□ -2.11
TRIM48Q8IWZ4 SNORD111.1-201ENST00000516421 86 ntBASIC1.89□□□□□ -2.11
TRIM48Q8IWZ4 RNU6-295P-201ENST00000516901 104 ntBASIC1.89□□□□□ -2.11
TRIM48Q8IWZ4 MIR3618-201ENST00000580330 88 ntBASIC1.89□□□□□ -2.11
TRIM48Q8IWZ4 AC103810.8-201ENST00000607347 118 ntBASIC1.89□□□□□ -2.11
TRIM48Q8IWZ4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.89□□□□□ -2.11
TRIM48Q8IWZ4 AL162726.3-218ENST00000636401 95 ntBASIC1.89□□□□□ -2.11
TRIM48Q8IWZ4 ZNF355P-201ENST00000427301 3216 ntBASIC1.89□□□□□ -2.11
TRIM48Q8IWZ4 Y_RNA.309-201ENST00000365046 111 ntBASIC1.88□□□□□ -2.11
TRIM48Q8IWZ4 RNU6-32P-201ENST00000383948 107 ntBASIC1.88□□□□□ -2.11
TRIM48Q8IWZ4 RNU6-13P-201ENST00000384248 107 ntBASIC1.88□□□□□ -2.11
TRIM48Q8IWZ4 RNU6-12P-201ENST00000384604 107 ntBASIC1.88□□□□□ -2.11
TRIM48Q8IWZ4 RNU6-41P-201ENST00000384741 107 ntBASIC1.88□□□□□ -2.11
TRIM48Q8IWZ4 AC245047.7-201ENST00000440265 293 ntBASIC1.88□□□□□ -2.11
TRIM48Q8IWZ4 HMGN2P23-201ENST00000456759 269 ntBASIC1.88□□□□□ -2.11
TRIM48Q8IWZ4 MIR5089-201ENST00000580047 84 ntBASIC1.88□□□□□ -2.11
TRIM48Q8IWZ4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.88□□□□□ -2.11
TRIM48Q8IWZ4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.88□□□□□ -2.11
TRIM48Q8IWZ4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
TRIM48Q8IWZ4 Y_RNA.299-201ENST00000364973 94 ntBASIC1.87□□□□□ -2.11
TRIM48Q8IWZ4 Y_RNA.328-201ENST00000365208 113 ntBASIC1.87□□□□□ -2.11
TRIM48Q8IWZ4 RNU6-616P-201ENST00000384353 107 ntBASIC1.87□□□□□ -2.11
TRIM48Q8IWZ4 RNU6-342P-201ENST00000384521 104 ntBASIC1.87□□□□□ -2.11
TRIM48Q8IWZ4 SNORA40.18-201ENST00000391200 128 ntBASIC1.87□□□□□ -2.11
TRIM48Q8IWZ4 RNU6-602P-201ENST00000411155 105 ntBASIC1.87□□□□□ -2.11
TRIM48Q8IWZ4 AL591806.2-201ENST00000433122 173 ntBASIC1.87□□□□□ -2.11
TRIM48Q8IWZ4 RN7SL274P-201ENST00000492268 272 ntBASIC1.87□□□□□ -2.11
TRIM48Q8IWZ4 RNA5SP445-201ENST00000515889 115 ntBASIC1.87□□□□□ -2.11
TRIM48Q8IWZ4 RNA5SP182-201ENST00000516064 82 ntBASIC1.87□□□□□ -2.11
TRIM48Q8IWZ4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.87□□□□□ -2.11
TRIM48Q8IWZ4 RNU6-548P-201ENST00000517083 115 ntBASIC1.87□□□□□ -2.11
TRIM48Q8IWZ4 AC141557.1-201ENST00000540982 400 ntBASIC1.87□□□□□ -2.11
TRIM48Q8IWZ4 MIR4524B-201ENST00000581569 115 ntBASIC1.87□□□□□ -2.11
TRIM48Q8IWZ4 SNRPGP19-201ENST00000603826 189 ntBASIC1.87□□□□□ -2.11
TRIM48Q8IWZ4 AL096861.1-201ENST00000610899 123 ntBASIC1.87□□□□□ -2.11
TRIM48Q8IWZ4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.87□□□□□ -2.11
TRIM48Q8IWZ4 Z97988.1-201ENST00000637697 135 ntBASIC1.87□□□□□ -2.11
TRIM48Q8IWZ4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
TRIM48Q8IWZ4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
TRIM48Q8IWZ4 RNU6-766P-201ENST00000362478 107 ntBASIC1.86□□□□□ -2.11
TRIM48Q8IWZ4 SNORA25.3-201ENST00000363205 127 ntBASIC1.86□□□□□ -2.11
TRIM48Q8IWZ4 AC108210.2-201ENST00000503681 201 ntBASIC1.86□□□□□ -2.11
TRIM48Q8IWZ4 RNU6-109P-201ENST00000516364 107 ntBASIC1.86□□□□□ -2.11
TRIM48Q8IWZ4 RNU6-184P-201ENST00000516514 107 ntBASIC1.86□□□□□ -2.11
TRIM48Q8IWZ4 AC019176.1-201ENST00000518519 225 ntBASIC1.86□□□□□ -2.11
TRIM48Q8IWZ4 MIR8065-201ENST00000620577 100 ntBASIC1.86□□□□□ -2.11
TRIM48Q8IWZ4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRIM48Q8IWZ4 Y_RNA.155-201ENST00000363632 101 ntBASIC1.85□□□□□ -2.11
TRIM48Q8IWZ4 RNU6-1237P-201ENST00000384777 107 ntBASIC1.85□□□□□ -2.11
TRIM48Q8IWZ4 MIR590-201ENST00000385008 97 ntBASIC1.85□□□□□ -2.11
TRIM48Q8IWZ4 U8.13-201ENST00000390842 128 ntBASIC1.85□□□□□ -2.11
TRIM48Q8IWZ4 HSPE1P24-201ENST00000450782 238 ntBASIC1.85□□□□□ -2.11
TRIM48Q8IWZ4 snoU13.9-201ENST00000458927 103 ntBASIC1.85□□□□□ -2.11
TRIM48Q8IWZ4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.85□□□□□ -2.11
TRIM48Q8IWZ4 Y_RNA.677-201ENST00000516401 85 ntBASIC1.85□□□□□ -2.11
TRIM48Q8IWZ4 RNA5SP170-201ENST00000517150 101 ntBASIC1.85□□□□□ -2.11
TRIM48Q8IWZ4 RNU6-537P-201ENST00000517277 103 ntBASIC1.85□□□□□ -2.11
TRIM48Q8IWZ4 CYP3A52P-201ENST00000563326 91 ntBASIC1.85□□□□□ -2.11
TRIM48Q8IWZ4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TRIM48Q8IWZ4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRIM48Q8IWZ4 SNORD115-19-201ENST00000363098 82 ntBASIC1.84□□□□□ -2.11
TRIM48Q8IWZ4 SNORD115-18-201ENST00000363293 82 ntBASIC1.84□□□□□ -2.11
TRIM48Q8IWZ4 SNORD115-17-201ENST00000364612 82 ntBASIC1.84□□□□□ -2.11
TRIM48Q8IWZ4 SNORA18-201ENST00000384416 132 ntBASIC1.84□□□□□ -2.11
TRIM48Q8IWZ4 MIR605-201ENST00000385078 83 ntBASIC1.84□□□□□ -2.11
TRIM48Q8IWZ4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
TRIM48Q8IWZ4 SNORD77B-201ENST00000391112 67 ntBASIC1.84□□□□□ -2.11
TRIM48Q8IWZ4 SUMO2P12-201ENST00000405924 140 ntBASIC1.84□□□□□ -2.11
TRIM48Q8IWZ4 SNORA7.5-201ENST00000410672 110 ntBASIC1.84□□□□□ -2.11
TRIM48Q8IWZ4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.84□□□□□ -2.11
TRIM48Q8IWZ4 snoU13.23-201ENST00000458863 104 ntBASIC1.84□□□□□ -2.11
TRIM48Q8IWZ4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.84□□□□□ -2.11
TRIM48Q8IWZ4 MIR676-201ENST00000390702 67 ntBASIC1.83□□□□□ -2.12
TRIM48Q8IWZ4 RNU2-40P-201ENST00000410833 196 ntBASIC1.83□□□□□ -2.12
TRIM48Q8IWZ4 RPL31P63-201ENST00000422565 375 ntBASIC1.83□□□□□ -2.12
TRIM48Q8IWZ4 HMGN2P19-201ENST00000425149 265 ntBASIC1.83□□□□□ -2.12
TRIM48Q8IWZ4 snoU13.25-201ENST00000458945 104 ntBASIC1.83□□□□□ -2.12
TRIM48Q8IWZ4 RPS27P21-201ENST00000486977 252 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms