Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 MIR6717-201ENST00000622747 73 ntBASIC1.84□□□□□ -2.11
VRK3Q8IV63 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
VRK3Q8IV63 ICE2P2-201ENST00000483823 2787 ntBASIC1.83□□□□□ -2.12
VRK3Q8IV63 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
VRK3Q8IV63 MIR424-201ENST00000362227 98 ntBASIC1.83□□□□□ -2.12
VRK3Q8IV63 Y_RNA.10-201ENST00000362371 110 ntBASIC1.83□□□□□ -2.12
VRK3Q8IV63 RNU4-67P-201ENST00000364569 141 ntBASIC1.83□□□□□ -2.12
VRK3Q8IV63 RNU6-409P-201ENST00000384114 104 ntBASIC1.83□□□□□ -2.12
VRK3Q8IV63 Y_RNA.470-201ENST00000384307 117 ntBASIC1.83□□□□□ -2.12
VRK3Q8IV63 RNU6-913P-201ENST00000390913 95 ntBASIC1.83□□□□□ -2.12
VRK3Q8IV63 SNORD28B-201ENST00000390993 75 ntBASIC1.83□□□□□ -2.12
VRK3Q8IV63 RNU6-733P-201ENST00000410759 104 ntBASIC1.83□□□□□ -2.12
VRK3Q8IV63 RPS3AP1-201ENST00000413190 320 ntBASIC1.83□□□□□ -2.12
VRK3Q8IV63 PGBD4P5-201ENST00000445958 426 ntBASIC1.83□□□□□ -2.12
VRK3Q8IV63 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.83□□□□□ -2.12
VRK3Q8IV63 RNU7-67P-201ENST00000459003 62 ntBASIC1.83□□□□□ -2.12
VRK3Q8IV63 snoU13.27-201ENST00000459278 104 ntBASIC1.83□□□□□ -2.12
VRK3Q8IV63 RPS29P11-201ENST00000496507 171 ntBASIC1.83□□□□□ -2.12
VRK3Q8IV63 RNU6-237P-201ENST00000515985 71 ntBASIC1.83□□□□□ -2.12
VRK3Q8IV63 MIR4709-201ENST00000577272 72 ntBASIC1.83□□□□□ -2.12
VRK3Q8IV63 AC062037.1-201ENST00000605302 128 ntBASIC1.83□□□□□ -2.12
VRK3Q8IV63 AC243994.1-201ENST00000618627 109 ntBASIC1.83□□□□□ -2.12
VRK3Q8IV63 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.83□□□□□ -2.12
VRK3Q8IV63 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
VRK3Q8IV63 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.82□□□□□ -2.12
VRK3Q8IV63 Y_RNA.377-201ENST00000365644 108 ntBASIC1.82□□□□□ -2.12
VRK3Q8IV63 Y_RNA.537-201ENST00000384626 109 ntBASIC1.82□□□□□ -2.12
VRK3Q8IV63 MIR605-201ENST00000385078 83 ntBASIC1.82□□□□□ -2.12
VRK3Q8IV63 RNU6-679P-201ENST00000391003 106 ntBASIC1.82□□□□□ -2.12
VRK3Q8IV63 RNA5SP100-201ENST00000410903 110 ntBASIC1.82□□□□□ -2.12
VRK3Q8IV63 RNA5SP59-201ENST00000410922 110 ntBASIC1.82□□□□□ -2.12
VRK3Q8IV63 AL445685.2-201ENST00000422551 342 ntBASIC1.82□□□□□ -2.12
VRK3Q8IV63 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.82□□□□□ -2.12
VRK3Q8IV63 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.82□□□□□ -2.12
VRK3Q8IV63 MIR548AE2-201ENST00000583456 67 ntBASIC1.82□□□□□ -2.12
VRK3Q8IV63 MIR4769-201ENST00000584126 77 ntBASIC1.82□□□□□ -2.12
VRK3Q8IV63 MIR8055-201ENST00000610739 97 ntBASIC1.82□□□□□ -2.12
VRK3Q8IV63 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.82□□□□□ -2.12
VRK3Q8IV63 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.82□□□□□ -2.12
VRK3Q8IV63 U1.36-201ENST00000620684 176 ntBASIC1.82□□□□□ -2.12
VRK3Q8IV63 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.82□□□□□ -2.12
VRK3Q8IV63 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.82□□□□□ -2.12
VRK3Q8IV63 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.82□□□□□ -2.12
VRK3Q8IV63 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
VRK3Q8IV63 Y_RNA.155-201ENST00000363632 101 ntBASIC1.81□□□□□ -2.12
VRK3Q8IV63 SNORA3A-201ENST00000364113 130 ntBASIC1.81□□□□□ -2.12
VRK3Q8IV63 RNU6-820P-201ENST00000384273 107 ntBASIC1.81□□□□□ -2.12
VRK3Q8IV63 RNU2-7P-201ENST00000410794 178 ntBASIC1.81□□□□□ -2.12
VRK3Q8IV63 RNU6-1190P-201ENST00000410811 104 ntBASIC1.81□□□□□ -2.12
VRK3Q8IV63 RNA5SP270-201ENST00000411361 118 ntBASIC1.81□□□□□ -2.12
VRK3Q8IV63 RNU6-1018P-201ENST00000516577 106 ntBASIC1.81□□□□□ -2.12
VRK3Q8IV63 RNA5SP33-201ENST00000516687 98 ntBASIC1.81□□□□□ -2.12
VRK3Q8IV63 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.81□□□□□ -2.12
VRK3Q8IV63 MIR3935-201ENST00000583472 104 ntBASIC1.81□□□□□ -2.12
VRK3Q8IV63 AL513534.2-201ENST00000603836 250 ntBASIC1.81□□□□□ -2.12
VRK3Q8IV63 FAM71BP1-201ENST00000604431 523 ntBASIC1.81□□□□□ -2.12
VRK3Q8IV63 SNORD3E-202ENST00000627253 216 ntBASIC1.81□□□□□ -2.12
VRK3Q8IV63 RNU6-616P-201ENST00000384353 107 ntBASIC1.8□□□□□ -2.12
VRK3Q8IV63 MIR9-3-201ENST00000385084 90 ntBASIC1.8□□□□□ -2.12
VRK3Q8IV63 U8.13-201ENST00000390842 128 ntBASIC1.8□□□□□ -2.12
VRK3Q8IV63 SNORA40.18-201ENST00000391200 128 ntBASIC1.8□□□□□ -2.12
VRK3Q8IV63 AC019129.1-201ENST00000403786 261 ntBASIC1.8□□□□□ -2.12
VRK3Q8IV63 MIR1289-2-201ENST00000408360 111 ntBASIC1.8□□□□□ -2.12
VRK3Q8IV63 AC004941.2-201ENST00000427009 228 ntBASIC1.8□□□□□ -2.12
VRK3Q8IV63 RNU7-34P-201ENST00000459394 64 ntBASIC1.8□□□□□ -2.12
VRK3Q8IV63 AC026421.1-201ENST00000519101 163 ntBASIC1.8□□□□□ -2.12
VRK3Q8IV63 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.8□□□□□ -2.12
VRK3Q8IV63 MIR4791-201ENST00000607666 84 ntBASIC1.8□□□□□ -2.12
VRK3Q8IV63 AC012531.4-201ENST00000616509 177 ntBASIC1.8□□□□□ -2.12
VRK3Q8IV63 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.8□□□□□ -2.12
VRK3Q8IV63 RNU6-170P-201ENST00000362832 104 ntBASIC1.79□□□□□ -2.12
VRK3Q8IV63 SNORA16.1-201ENST00000364597 132 ntBASIC1.79□□□□□ -2.12
VRK3Q8IV63 Y_RNA.290-201ENST00000364879 114 ntBASIC1.79□□□□□ -2.12
VRK3Q8IV63 RNU6-360P-201ENST00000390944 104 ntBASIC1.79□□□□□ -2.12
VRK3Q8IV63 SNORD77B-201ENST00000391112 67 ntBASIC1.79□□□□□ -2.12
VRK3Q8IV63 SNORD23.1-201ENST00000408212 104 ntBASIC1.79□□□□□ -2.12
VRK3Q8IV63 SNORA74.3-201ENST00000517108 154 ntBASIC1.79□□□□□ -2.12
VRK3Q8IV63 MIR4777-201ENST00000583710 86 ntBASIC1.79□□□□□ -2.12
VRK3Q8IV63 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
VRK3Q8IV63 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
VRK3Q8IV63 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
VRK3Q8IV63 RNU6-457P-201ENST00000363999 107 ntBASIC1.78□□□□□ -2.12
VRK3Q8IV63 RNU6-1152P-201ENST00000384576 107 ntBASIC1.78□□□□□ -2.12
VRK3Q8IV63 MIR17-201ENST00000385012 84 ntBASIC1.78□□□□□ -2.12
VRK3Q8IV63 MIR450A2-201ENST00000385022 100 ntBASIC1.78□□□□□ -2.12
VRK3Q8IV63 SUMO2P12-201ENST00000405924 140 ntBASIC1.78□□□□□ -2.12
VRK3Q8IV63 RNA5SP489-201ENST00000410986 109 ntBASIC1.78□□□□□ -2.12
VRK3Q8IV63 RNA5SP450-201ENST00000411206 102 ntBASIC1.78□□□□□ -2.12
VRK3Q8IV63 snoU13.16-201ENST00000459350 104 ntBASIC1.78□□□□□ -2.12
VRK3Q8IV63 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.78□□□□□ -2.12
VRK3Q8IV63 RNU6-521P-201ENST00000516663 105 ntBASIC1.78□□□□□ -2.12
VRK3Q8IV63 SNORA31.25-201ENST00000517242 134 ntBASIC1.78□□□□□ -2.12
VRK3Q8IV63 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.78□□□□□ -2.12
VRK3Q8IV63 AC012493.3-201ENST00000604494 112 ntBASIC1.78□□□□□ -2.12
VRK3Q8IV63 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
VRK3Q8IV63 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
VRK3Q8IV63 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
VRK3Q8IV63 RNU6-1201P-201ENST00000384227 107 ntBASIC1.77□□□□□ -2.13
VRK3Q8IV63 RNU6-1067P-201ENST00000384752 107 ntBASIC1.77□□□□□ -2.13
VRK3Q8IV63 MIR194-1-201ENST00000384892 85 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms