Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RNU6-524P-201ENST00000384270 107 ntBASIC2.89□□□□□ -1.95
RNF135Q8IUD6 Y_RNA.537-201ENST00000384626 109 ntBASIC2.89□□□□□ -1.95
RNF135Q8IUD6 MIR764-201ENST00000390811 85 ntBASIC2.89□□□□□ -1.95
RNF135Q8IUD6 RNU6-482P-201ENST00000391068 107 ntBASIC2.89□□□□□ -1.95
RNF135Q8IUD6 Z98742.3-201ENST00000418637 326 ntBASIC2.89□□□□□ -1.95
RNF135Q8IUD6 AL591806.2-201ENST00000433122 173 ntBASIC2.89□□□□□ -1.95
RNF135Q8IUD6 RNU6-1244P-201ENST00000363614 108 ntBASIC2.88□□□□□ -1.95
RNF135Q8IUD6 RNU6-457P-201ENST00000363999 107 ntBASIC2.88□□□□□ -1.95
RNF135Q8IUD6 RNU6-1229P-201ENST00000364295 107 ntBASIC2.88□□□□□ -1.95
RNF135Q8IUD6 RNU1-52P-201ENST00000384190 164 ntBASIC2.88□□□□□ -1.95
RNF135Q8IUD6 RNU6-1307P-201ENST00000391012 103 ntBASIC2.88□□□□□ -1.95
RNF135Q8IUD6 RNA5SP100-201ENST00000410903 110 ntBASIC2.88□□□□□ -1.95
RNF135Q8IUD6 RNA5SP59-201ENST00000410922 110 ntBASIC2.88□□□□□ -1.95
RNF135Q8IUD6 RNU7-193P-201ENST00000516723 65 ntBASIC2.88□□□□□ -1.95
RNF135Q8IUD6 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.88□□□□□ -1.95
RNF135Q8IUD6 FAM106DP-201ENST00000586416 501 ntBASIC2.88□□□□□ -1.95
RNF135Q8IUD6 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.88□□□□□ -1.95
RNF135Q8IUD6 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.88□□□□□ -1.95
RNF135Q8IUD6 AC005336.3-201ENST00000623833 2679 ntBASIC2.88□□□□□ -1.95
RNF135Q8IUD6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RNF135Q8IUD6 RPS29P28-201ENST00000446439 141 ntBASIC2.87□□□□□ -1.95
RNF135Q8IUD6 RPL23AP6-201ENST00000446637 472 ntBASIC2.87□□□□□ -1.95
RNF135Q8IUD6 SNORA74.3-201ENST00000517108 154 ntBASIC2.87□□□□□ -1.95
RNF135Q8IUD6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.87□□□□□ -1.95
RNF135Q8IUD6 MIR34C-201ENST00000384831 77 ntBASIC2.86□□□□□ -1.95
RNF135Q8IUD6 MIR206-201ENST00000384872 86 ntBASIC2.86□□□□□ -1.95
RNF135Q8IUD6 MIR512-1-201ENST00000384913 84 ntBASIC2.86□□□□□ -1.95
RNF135Q8IUD6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.86□□□□□ -1.95
RNF135Q8IUD6 MIR1289-2-201ENST00000408360 111 ntBASIC2.86□□□□□ -1.95
RNF135Q8IUD6 RNA5SP450-201ENST00000411206 102 ntBASIC2.86□□□□□ -1.95
RNF135Q8IUD6 AL161932.1-201ENST00000437408 146 ntBASIC2.86□□□□□ -1.95
RNF135Q8IUD6 RNU6-548P-201ENST00000517083 115 ntBASIC2.86□□□□□ -1.95
RNF135Q8IUD6 AC145423.2-201ENST00000610631 239 ntBASIC2.86□□□□□ -1.95
RNF135Q8IUD6 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.86□□□□□ -1.95
RNF135Q8IUD6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.86□□□□□ -1.95
RNF135Q8IUD6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.86□□□□□ -1.95
RNF135Q8IUD6 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.85□□□□□ -1.95
RNF135Q8IUD6 HMGN2P35-201ENST00000412164 270 ntBASIC2.85□□□□□ -1.95
RNF135Q8IUD6 RPL31P63-201ENST00000422565 375 ntBASIC2.85□□□□□ -1.95
RNF135Q8IUD6 snoU13.16-201ENST00000459350 104 ntBASIC2.85□□□□□ -1.95
RNF135Q8IUD6 MIR4648-201ENST00000580107 72 ntBASIC2.85□□□□□ -1.95
RNF135Q8IUD6 RNU1-138P-201ENST00000384093 164 ntBASIC2.84□□□□□ -1.95
RNF135Q8IUD6 Y_RNA.567-201ENST00000384736 106 ntBASIC2.84□□□□□ -1.95
RNF135Q8IUD6 MIR519C-201ENST00000385053 87 ntBASIC2.84□□□□□ -1.95
RNF135Q8IUD6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.84□□□□□ -1.95
RNF135Q8IUD6 RPS29P6-201ENST00000438196 145 ntBASIC2.84□□□□□ -1.95
RNF135Q8IUD6 AC093729.1-201ENST00000513074 128 ntBASIC2.84□□□□□ -1.95
RNF135Q8IUD6 RNU6-826P-201ENST00000516827 104 ntBASIC2.84□□□□□ -1.95
RNF135Q8IUD6 SNORA31.25-201ENST00000517242 134 ntBASIC2.84□□□□□ -1.95
RNF135Q8IUD6 MIR5194-201ENST00000582634 120 ntBASIC2.84□□□□□ -1.95
RNF135Q8IUD6 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
RNF135Q8IUD6 RNA5SP289-201ENST00000362332 137 ntBASIC2.83□□□□□ -1.96
RNF135Q8IUD6 MIR548G-201ENST00000408442 89 ntBASIC2.83□□□□□ -1.96
RNF135Q8IUD6 RNA5SP425-201ENST00000410336 112 ntBASIC2.83□□□□□ -1.96
RNF135Q8IUD6 RNU6-613P-201ENST00000410412 108 ntBASIC2.83□□□□□ -1.96
RNF135Q8IUD6 HMGN1P33-201ENST00000432945 451 ntBASIC2.83□□□□□ -1.96
RNF135Q8IUD6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF135Q8IUD6 AC003982.1-202ENST00000469928 248 ntBASIC2.83□□□□□ -1.96
RNF135Q8IUD6 SNORA31.17-201ENST00000516953 127 ntBASIC2.83□□□□□ -1.96
RNF135Q8IUD6 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.83□□□□□ -1.96
RNF135Q8IUD6 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RNF135Q8IUD6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
RNF135Q8IUD6 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RNF135Q8IUD6 RNA5SP99-201ENST00000364020 114 ntBASIC2.82□□□□□ -1.96
RNF135Q8IUD6 RNU6-342P-201ENST00000384521 104 ntBASIC2.82□□□□□ -1.96
RNF135Q8IUD6 RNU6-360P-201ENST00000390944 104 ntBASIC2.82□□□□□ -1.96
RNF135Q8IUD6 RNU4-53P-201ENST00000410828 140 ntBASIC2.82□□□□□ -1.96
RNF135Q8IUD6 RNU7-43P-201ENST00000516554 64 ntBASIC2.82□□□□□ -1.96
RNF135Q8IUD6 RNU6-1123P-201ENST00000362347 106 ntBASIC2.81□□□□□ -1.96
RNF135Q8IUD6 MIR524-201ENST00000385242 87 ntBASIC2.81□□□□□ -1.96
RNF135Q8IUD6 RNU1-98P-201ENST00000458992 160 ntBASIC2.81□□□□□ -1.96
RNF135Q8IUD6 AC140658.3-201ENST00000567603 271 ntBASIC2.81□□□□□ -1.96
RNF135Q8IUD6 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.81□□□□□ -1.96
RNF135Q8IUD6 Y_RNA.448-201ENST00000384185 108 ntBASIC2.8□□□□□ -1.96
RNF135Q8IUD6 AC011753.1-201ENST00000451001 220 ntBASIC2.8□□□□□ -1.96
RNF135Q8IUD6 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.8□□□□□ -1.96
RNF135Q8IUD6 RNU6-917P-201ENST00000516294 104 ntBASIC2.8□□□□□ -1.96
RNF135Q8IUD6 RNU7-35P-201ENST00000517174 62 ntBASIC2.8□□□□□ -1.96
RNF135Q8IUD6 AL513043.2-201ENST00000573941 143 ntBASIC2.8□□□□□ -1.96
RNF135Q8IUD6 RNU6-90P-201ENST00000606352 106 ntBASIC2.8□□□□□ -1.96
RNF135Q8IUD6 MIR8055-201ENST00000610739 97 ntBASIC2.8□□□□□ -1.96
RNF135Q8IUD6 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.8□□□□□ -1.96
RNF135Q8IUD6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RNF135Q8IUD6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.79□□□□□ -1.96
RNF135Q8IUD6 SNORD115-37-201ENST00000363768 82 ntBASIC2.79□□□□□ -1.96
RNF135Q8IUD6 RNU6-865P-201ENST00000364772 107 ntBASIC2.79□□□□□ -1.96
RNF135Q8IUD6 AL023284.1-201ENST00000403956 276 ntBASIC2.79□□□□□ -1.96
RNF135Q8IUD6 SNORD88.1-201ENST00000408684 91 ntBASIC2.79□□□□□ -1.96
RNF135Q8IUD6 AC245047.7-201ENST00000440265 293 ntBASIC2.79□□□□□ -1.96
RNF135Q8IUD6 AC020891.4-201ENST00000605745 93 ntBASIC2.79□□□□□ -1.96
RNF135Q8IUD6 AC008133.2-201ENST00000624540 351 ntBASIC2.79□□□□□ -1.96
RNF135Q8IUD6 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RNF135Q8IUD6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
RNF135Q8IUD6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
RNF135Q8IUD6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RNF135Q8IUD6 Y_RNA.545-201ENST00000384652 105 ntBASIC2.78□□□□□ -1.96
RNF135Q8IUD6 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
RNF135Q8IUD6 RN7SKP223-201ENST00000410582 62 ntBASIC2.78□□□□□ -1.96
RNF135Q8IUD6 SPINT5P-201ENST00000448174 155 ntBASIC2.78□□□□□ -1.96
RNF135Q8IUD6 AC234781.5-201ENST00000508429 271 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms