Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.6□□□□□ -1.99
TRIM50Q86XT4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM50Q86XT4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
TRIM50Q86XT4 SNORD45B-201ENST00000364617 72 ntBASIC2.6□□□□□ -1.99
TRIM50Q86XT4 RNA5SP212-201ENST00000391223 107 ntBASIC2.6□□□□□ -1.99
TRIM50Q86XT4 AC090844.1-201ENST00000422019 156 ntBASIC2.6□□□□□ -1.99
TRIM50Q86XT4 RNU7-2P-201ENST00000516096 62 ntBASIC2.6□□□□□ -1.99
TRIM50Q86XT4 RNU6-162P-201ENST00000516228 103 ntBASIC2.6□□□□□ -1.99
TRIM50Q86XT4 SNORA16B-201ENST00000364674 135 ntBASIC2.59□□□□□ -1.99
TRIM50Q86XT4 SNORD115-35-201ENST00000365122 82 ntBASIC2.59□□□□□ -1.99
TRIM50Q86XT4 RNU6-1134P-201ENST00000365156 101 ntBASIC2.59□□□□□ -1.99
TRIM50Q86XT4 Y_RNA.377-201ENST00000365644 108 ntBASIC2.59□□□□□ -1.99
TRIM50Q86XT4 Y_RNA.388-201ENST00000383919 113 ntBASIC2.59□□□□□ -1.99
TRIM50Q86XT4 RNU6-1086P-201ENST00000410930 100 ntBASIC2.59□□□□□ -1.99
TRIM50Q86XT4 AL161935.2-201ENST00000414627 60 ntBASIC2.59□□□□□ -1.99
TRIM50Q86XT4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM50Q86XT4 SNORD111.1-201ENST00000516421 86 ntBASIC2.59□□□□□ -1.99
TRIM50Q86XT4 RNU6-922P-201ENST00000516753 99 ntBASIC2.59□□□□□ -1.99
TRIM50Q86XT4 RNA5SP402-201ENST00000517148 110 ntBASIC2.59□□□□□ -1.99
TRIM50Q86XT4 RNU7-35P-201ENST00000517174 62 ntBASIC2.59□□□□□ -1.99
TRIM50Q86XT4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.59□□□□□ -1.99
TRIM50Q86XT4 MIR21-201ENST00000362134 72 ntBASIC2.58□□□□□ -2
TRIM50Q86XT4 RNU6-1313P-201ENST00000362622 102 ntBASIC2.58□□□□□ -2
TRIM50Q86XT4 SNORA67.1-201ENST00000364749 141 ntBASIC2.58□□□□□ -2
TRIM50Q86XT4 Y_RNA.290-201ENST00000364879 114 ntBASIC2.58□□□□□ -2
TRIM50Q86XT4 RNU6-1237P-201ENST00000384777 107 ntBASIC2.58□□□□□ -2
TRIM50Q86XT4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.58□□□□□ -2
TRIM50Q86XT4 AC019129.1-201ENST00000403786 261 ntBASIC2.58□□□□□ -2
TRIM50Q86XT4 AL356320.1-201ENST00000429616 163 ntBASIC2.58□□□□□ -2
TRIM50Q86XT4 RPS12P2-201ENST00000439728 269 ntBASIC2.58□□□□□ -2
TRIM50Q86XT4 AC026421.1-201ENST00000519101 163 ntBASIC2.58□□□□□ -2
TRIM50Q86XT4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.58□□□□□ -2
TRIM50Q86XT4 MIR1273D-201ENST00000577266 86 ntBASIC2.58□□□□□ -2
TRIM50Q86XT4 MIR4648-201ENST00000580107 72 ntBASIC2.58□□□□□ -2
TRIM50Q86XT4 MIR3935-201ENST00000583472 104 ntBASIC2.58□□□□□ -2
TRIM50Q86XT4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM50Q86XT4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TRIM50Q86XT4 RNU6-60P-201ENST00000364792 103 ntBASIC2.57□□□□□ -2
TRIM50Q86XT4 MIR206-201ENST00000384872 86 ntBASIC2.57□□□□□ -2
TRIM50Q86XT4 RPL31P63-201ENST00000422565 375 ntBASIC2.57□□□□□ -2
TRIM50Q86XT4 AC108729.3-201ENST00000513484 108 ntBASIC2.57□□□□□ -2
TRIM50Q86XT4 MIR5007-201ENST00000583098 95 ntBASIC2.57□□□□□ -2
TRIM50Q86XT4 MIR4777-201ENST00000583710 86 ntBASIC2.57□□□□□ -2
TRIM50Q86XT4 AC096720.1-201ENST00000604441 183 ntBASIC2.57□□□□□ -2
TRIM50Q86XT4 AC062037.1-201ENST00000605302 128 ntBASIC2.57□□□□□ -2
TRIM50Q86XT4 AL137847.3-201ENST00000611521 109 ntBASIC2.57□□□□□ -2
TRIM50Q86XT4 U7.3-201ENST00000616123 62 ntBASIC2.57□□□□□ -2
TRIM50Q86XT4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TRIM50Q86XT4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TRIM50Q86XT4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
TRIM50Q86XT4 MIR6073-201ENST00000352083 89 ntBASIC2.56□□□□□ -2
TRIM50Q86XT4 SNORD38B-201ENST00000384690 67 ntBASIC2.56□□□□□ -2
TRIM50Q86XT4 AC096949.1-201ENST00000412047 152 ntBASIC2.56□□□□□ -2
TRIM50Q86XT4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.56□□□□□ -2
TRIM50Q86XT4 AC009474.2-201ENST00000451383 136 ntBASIC2.56□□□□□ -2
TRIM50Q86XT4 snoU13.26-201ENST00000459452 105 ntBASIC2.56□□□□□ -2
TRIM50Q86XT4 RNU7-79P-201ENST00000516082 62 ntBASIC2.56□□□□□ -2
TRIM50Q86XT4 SNORD67.1-201ENST00000516618 108 ntBASIC2.56□□□□□ -2
TRIM50Q86XT4 SNORD38B-202ENST00000625943 69 ntBASIC2.56□□□□□ -2
TRIM50Q86XT4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TRIM50Q86XT4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.55□□□□□ -2
TRIM50Q86XT4 Y_RNA.95-201ENST00000363079 95 ntBASIC2.55□□□□□ -2
TRIM50Q86XT4 SNORD41-201ENST00000386967 70 ntBASIC2.55□□□□□ -2
TRIM50Q86XT4 RNU6-1307P-201ENST00000391012 103 ntBASIC2.55□□□□□ -2
TRIM50Q86XT4 MIR4287-201ENST00000579398 78 ntBASIC2.55□□□□□ -2
TRIM50Q86XT4 AL773524.1-201ENST00000614065 229 ntBASIC2.55□□□□□ -2
TRIM50Q86XT4 MIR376B-201ENST00000614515 100 ntBASIC2.55□□□□□ -2
TRIM50Q86XT4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.55□□□□□ -2
TRIM50Q86XT4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
TRIM50Q86XT4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.54□□□□□ -2
TRIM50Q86XT4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.54□□□□□ -2
TRIM50Q86XT4 Y_RNA.467-201ENST00000384297 102 ntBASIC2.54□□□□□ -2
TRIM50Q86XT4 MIR144-201ENST00000384886 86 ntBASIC2.54□□□□□ -2
TRIM50Q86XT4 AC244636.1-201ENST00000421152 228 ntBASIC2.54□□□□□ -2
TRIM50Q86XT4 MRPL35P3-201ENST00000421557 364 ntBASIC2.54□□□□□ -2
TRIM50Q86XT4 snoU13.15-201ENST00000459407 104 ntBASIC2.54□□□□□ -2
TRIM50Q86XT4 AC121758.2-201ENST00000553271 193 ntBASIC2.54□□□□□ -2
TRIM50Q86XT4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.54□□□□□ -2
TRIM50Q86XT4 AC105081.1-201ENST00000617727 106 ntBASIC2.54□□□□□ -2
TRIM50Q86XT4 MIR6873-201ENST00000622788 63 ntBASIC2.54□□□□□ -2
TRIM50Q86XT4 Y_RNA.448-201ENST00000384185 108 ntBASIC2.53□□□□□ -2
TRIM50Q86XT4 MIR221-201ENST00000385135 110 ntBASIC2.53□□□□□ -2
TRIM50Q86XT4 UBL5P1-201ENST00000507979 193 ntBASIC2.53□□□□□ -2
TRIM50Q86XT4 AC022254.1-201ENST00000567857 235 ntBASIC2.53□□□□□ -2
TRIM50Q86XT4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.53□□□□□ -2
TRIM50Q86XT4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
TRIM50Q86XT4 Y_RNA.247-201ENST00000364500 92 ntBASIC2.52□□□□□ -2.01
TRIM50Q86XT4 SNORA64-201ENST00000384674 134 ntBASIC2.52□□□□□ -2.01
TRIM50Q86XT4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TRIM50Q86XT4 BTF3P4-201ENST00000418852 495 ntBASIC2.52□□□□□ -2.01
TRIM50Q86XT4 RNA5SP445-201ENST00000515889 115 ntBASIC2.52□□□□□ -2.01
TRIM50Q86XT4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.52□□□□□ -2.01
TRIM50Q86XT4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM50Q86XT4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM50Q86XT4 AC131280.1-202ENST00000624067 4211 ntBASIC2.51□□□□□ -2.01
TRIM50Q86XT4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM50Q86XT4 RNA5SP432-201ENST00000362480 116 ntBASIC2.51□□□□□ -2.01
TRIM50Q86XT4 RNA5SP48-201ENST00000363969 126 ntBASIC2.51□□□□□ -2.01
TRIM50Q86XT4 RNU6-865P-201ENST00000364772 107 ntBASIC2.51□□□□□ -2.01
TRIM50Q86XT4 MIR450A2-201ENST00000385022 100 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 206 ms