Protein–RNA interactions for Protein: Q86VR2

RETREG3, Reticulophagy regulator 3, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3Q86VR2 AC004965.1-201ENST00000413033 213 ntBASIC2.82□□□□□ -1.96
RETREG3Q86VR2 SNORD4B-201ENST00000459083 72 ntBASIC2.82□□□□□ -1.96
RETREG3Q86VR2 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.82□□□□□ -1.96
RETREG3Q86VR2 MIR4500-201ENST00000579472 76 ntBASIC2.82□□□□□ -1.96
RETREG3Q86VR2 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.82□□□□□ -1.96
RETREG3Q86VR2 SNORA74D-201ENST00000516404 141 ntBASIC2.81□□□□□ -1.96
RETREG3Q86VR2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.81□□□□□ -1.96
RETREG3Q86VR2 U7.4-201ENST00000614961 63 ntBASIC2.81□□□□□ -1.96
RETREG3Q86VR2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RETREG3Q86VR2 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.8□□□□□ -1.96
RETREG3Q86VR2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.8□□□□□ -1.96
RETREG3Q86VR2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RETREG3Q86VR2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.8□□□□□ -1.96
RETREG3Q86VR2 RNU4-83P-201ENST00000410863 133 ntBASIC2.8□□□□□ -1.96
RETREG3Q86VR2 SNRPGP12-201ENST00000449481 213 ntBASIC2.8□□□□□ -1.96
RETREG3Q86VR2 snoU13.2-201ENST00000459201 104 ntBASIC2.8□□□□□ -1.96
RETREG3Q86VR2 AL512598.1-201ENST00000610158 273 ntBASIC2.8□□□□□ -1.96
RETREG3Q86VR2 MIR3651-201ENST00000630427 90 ntBASIC2.8□□□□□ -1.96
RETREG3Q86VR2 MIR22-201ENST00000362190 85 ntBASIC2.79□□□□□ -1.96
RETREG3Q86VR2 RNA5SP259-201ENST00000365541 109 ntBASIC2.79□□□□□ -1.96
RETREG3Q86VR2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.79□□□□□ -1.96
RETREG3Q86VR2 AC244023.1-201ENST00000426884 112 ntBASIC2.79□□□□□ -1.96
RETREG3Q86VR2 AC138749.4-201ENST00000563970 127 ntBASIC2.79□□□□□ -1.96
RETREG3Q86VR2 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.79□□□□□ -1.96
RETREG3Q86VR2 AC242498.1-201ENST00000604134 111 ntBASIC2.79□□□□□ -1.96
RETREG3Q86VR2 U6.109-201ENST00000636749 87 ntBASIC2.79□□□□□ -1.96
RETREG3Q86VR2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RETREG3Q86VR2 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
RETREG3Q86VR2 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.79□□□□□ -1.96
RETREG3Q86VR2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
RETREG3Q86VR2 MIR194-1-201ENST00000384892 85 ntBASIC2.78□□□□□ -1.96
RETREG3Q86VR2 MIR588-201ENST00000384900 83 ntBASIC2.78□□□□□ -1.96
RETREG3Q86VR2 RNU6-850P-201ENST00000516934 103 ntBASIC2.78□□□□□ -1.96
RETREG3Q86VR2 MIR5680-201ENST00000577577 84 ntBASIC2.78□□□□□ -1.96
RETREG3Q86VR2 MIR4529-201ENST00000578110 78 ntBASIC2.78□□□□□ -1.96
RETREG3Q86VR2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
RETREG3Q86VR2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RETREG3Q86VR2 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.97
RETREG3Q86VR2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.77□□□□□ -1.97
RETREG3Q86VR2 RNU6-478P-201ENST00000363904 110 ntBASIC2.77□□□□□ -1.97
RETREG3Q86VR2 RNU4-47P-201ENST00000410876 114 ntBASIC2.77□□□□□ -1.97
RETREG3Q86VR2 AL139132.1-201ENST00000431587 344 ntBASIC2.77□□□□□ -1.97
RETREG3Q86VR2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.77□□□□□ -1.97
RETREG3Q86VR2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.77□□□□□ -1.97
RETREG3Q86VR2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.77□□□□□ -1.97
RETREG3Q86VR2 PRELID3BP2-201ENST00000605362 201 ntBASIC2.77□□□□□ -1.97
RETREG3Q86VR2 WWP1P1-201ENST00000466609 2769 ntBASIC2.77□□□□□ -1.97
RETREG3Q86VR2 RNU6-1094P-201ENST00000362416 104 ntBASIC2.76□□□□□ -1.97
RETREG3Q86VR2 Y_RNA.545-201ENST00000384652 105 ntBASIC2.76□□□□□ -1.97
RETREG3Q86VR2 AL450471.1-201ENST00000447509 127 ntBASIC2.76□□□□□ -1.97
RETREG3Q86VR2 snoU13.11-201ENST00000459219 104 ntBASIC2.76□□□□□ -1.97
RETREG3Q86VR2 AC090255.1-201ENST00000495779 349 ntBASIC2.76□□□□□ -1.97
RETREG3Q86VR2 SNORA31.25-201ENST00000517242 134 ntBASIC2.76□□□□□ -1.97
RETREG3Q86VR2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
RETREG3Q86VR2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.76□□□□□ -1.97
RETREG3Q86VR2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
RETREG3Q86VR2 RNU6-571P-201ENST00000384128 107 ntBASIC2.75□□□□□ -1.97
RETREG3Q86VR2 MIR512-1-201ENST00000384913 84 ntBASIC2.75□□□□□ -1.97
RETREG3Q86VR2 MIR513A1-201ENST00000385138 129 ntBASIC2.75□□□□□ -1.97
RETREG3Q86VR2 NDUFB4P4-201ENST00000404822 243 ntBASIC2.75□□□□□ -1.97
RETREG3Q86VR2 HMGN2P35-201ENST00000412164 270 ntBASIC2.75□□□□□ -1.97
RETREG3Q86VR2 BX276092.1-201ENST00000427368 251 ntBASIC2.75□□□□□ -1.97
RETREG3Q86VR2 RNU7-85P-201ENST00000458851 63 ntBASIC2.75□□□□□ -1.97
RETREG3Q86VR2 Y_RNA.648-201ENST00000459455 110 ntBASIC2.75□□□□□ -1.97
RETREG3Q86VR2 MIR3200-201ENST00000580767 85 ntBASIC2.75□□□□□ -1.97
RETREG3Q86VR2 SNORA4-201ENST00000584302 138 ntBASIC2.75□□□□□ -1.97
RETREG3Q86VR2 MIR7112-201ENST00000616126 65 ntBASIC2.75□□□□□ -1.97
RETREG3Q86VR2 AC009487.2-201ENST00000420969 6821 ntBASIC2.75□□□□□ -1.97
RETREG3Q86VR2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
RETREG3Q86VR2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.75□□□□□ -1.97
RETREG3Q86VR2 AL365361.1-201ENST00000566942 3481 ntBASIC2.75□□□□□ -1.97
RETREG3Q86VR2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.74□□□□□ -1.97
RETREG3Q86VR2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
RETREG3Q86VR2 Y_RNA.508-201ENST00000384502 114 ntBASIC2.74□□□□□ -1.97
RETREG3Q86VR2 AC023790.1-201ENST00000482174 347 ntBASIC2.74□□□□□ -1.97
RETREG3Q86VR2 RNU6-922P-201ENST00000516753 99 ntBASIC2.74□□□□□ -1.97
RETREG3Q86VR2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.74□□□□□ -1.97
RETREG3Q86VR2 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.74□□□□□ -1.97
RETREG3Q86VR2 MIR8057-201ENST00000620957 69 ntBASIC2.74□□□□□ -1.97
RETREG3Q86VR2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.73□□□□□ -1.97
RETREG3Q86VR2 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.73□□□□□ -1.97
RETREG3Q86VR2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.73□□□□□ -1.97
RETREG3Q86VR2 Y_RNA.119-201ENST00000363301 96 ntBASIC2.73□□□□□ -1.97
RETREG3Q86VR2 RNU6-624P-201ENST00000363411 107 ntBASIC2.73□□□□□ -1.97
RETREG3Q86VR2 SNORA3A-201ENST00000364113 130 ntBASIC2.73□□□□□ -1.97
RETREG3Q86VR2 RNU6-396P-201ENST00000365369 105 ntBASIC2.73□□□□□ -1.97
RETREG3Q86VR2 SNORA72.6-201ENST00000384520 129 ntBASIC2.73□□□□□ -1.97
RETREG3Q86VR2 MIR5004-201ENST00000579078 107 ntBASIC2.73□□□□□ -1.97
RETREG3Q86VR2 AC067747.1-201ENST00000608026 250 ntBASIC2.73□□□□□ -1.97
RETREG3Q86VR2 AL096861.1-201ENST00000610899 123 ntBASIC2.73□□□□□ -1.97
RETREG3Q86VR2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RETREG3Q86VR2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RETREG3Q86VR2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
RETREG3Q86VR2 MIR563-201ENST00000385080 79 ntBASIC2.72□□□□□ -1.97
RETREG3Q86VR2 SNORD41-201ENST00000386967 70 ntBASIC2.72□□□□□ -1.97
RETREG3Q86VR2 AC008885.1-201ENST00000514930 301 ntBASIC2.72□□□□□ -1.97
RETREG3Q86VR2 RNU7-193P-201ENST00000516723 65 ntBASIC2.72□□□□□ -1.97
RETREG3Q86VR2 AC107016.2-201ENST00000547968 190 ntBASIC2.72□□□□□ -1.97
RETREG3Q86VR2 MIR4796-201ENST00000580742 81 ntBASIC2.72□□□□□ -1.97
RETREG3Q86VR2 MIR3192-201ENST00000584920 77 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 210.5 ms