Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 RNA5SP489-201ENST00000410986 109 ntBASIC2.29□□□□□ -2.04
USP48Q86UV5 RNU7-96P-201ENST00000459535 64 ntBASIC2.29□□□□□ -2.04
USP48Q86UV5 RPS29P24-201ENST00000486345 171 ntBASIC2.29□□□□□ -2.04
USP48Q86UV5 RNU6-998P-201ENST00000515894 101 ntBASIC2.29□□□□□ -2.04
USP48Q86UV5 RNU6-412P-201ENST00000516434 106 ntBASIC2.29□□□□□ -2.04
USP48Q86UV5 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.29□□□□□ -2.04
USP48Q86UV5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.29□□□□□ -2.04
USP48Q86UV5 RNU6-94P-201ENST00000607728 107 ntBASIC2.29□□□□□ -2.04
USP48Q86UV5 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.29□□□□□ -2.04
USP48Q86UV5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.29□□□□□ -2.04
USP48Q86UV5 AC084768.2-201ENST00000622736 221 ntBASIC2.29□□□□□ -2.04
USP48Q86UV5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USP48Q86UV5 MIR342-201ENST00000362212 99 ntBASIC2.28□□□□□ -2.04
USP48Q86UV5 Y_RNA.323-201ENST00000365157 109 ntBASIC2.28□□□□□ -2.04
USP48Q86UV5 Y_RNA.344-201ENST00000365381 112 ntBASIC2.28□□□□□ -2.04
USP48Q86UV5 RNU6-1014P-201ENST00000383940 103 ntBASIC2.28□□□□□ -2.04
USP48Q86UV5 AL451046.2-201ENST00000403074 277 ntBASIC2.28□□□□□ -2.04
USP48Q86UV5 HMGN2P19-201ENST00000425149 265 ntBASIC2.28□□□□□ -2.04
USP48Q86UV5 snoU13.9-201ENST00000458927 103 ntBASIC2.28□□□□□ -2.04
USP48Q86UV5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.28□□□□□ -2.04
USP48Q86UV5 MIR548AR-201ENST00000582191 57 ntBASIC2.28□□□□□ -2.04
USP48Q86UV5 SNORA63.5-201ENST00000363548 123 ntBASIC2.27□□□□□ -2.05
USP48Q86UV5 RNU4-16P-201ENST00000364737 141 ntBASIC2.27□□□□□ -2.05
USP48Q86UV5 SNX2P2-201ENST00000424553 323 ntBASIC2.27□□□□□ -2.05
USP48Q86UV5 RN7SL274P-201ENST00000492268 272 ntBASIC2.27□□□□□ -2.05
USP48Q86UV5 RNU2-13P-201ENST00000515909 113 ntBASIC2.27□□□□□ -2.05
USP48Q86UV5 RNU7-43P-201ENST00000516554 64 ntBASIC2.27□□□□□ -2.05
USP48Q86UV5 MIR3198-2-201ENST00000577868 80 ntBASIC2.27□□□□□ -2.05
USP48Q86UV5 MIR4303-201ENST00000581299 66 ntBASIC2.27□□□□□ -2.05
USP48Q86UV5 uc_338.20-201ENST00000621563 178 ntBASIC2.27□□□□□ -2.05
USP48Q86UV5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USP48Q86UV5 RNY4P6-201ENST00000363667 96 ntBASIC2.26□□□□□ -2.05
USP48Q86UV5 Y_RNA.163-201ENST00000363702 113 ntBASIC2.26□□□□□ -2.05
USP48Q86UV5 Y_RNA.328-201ENST00000365208 113 ntBASIC2.26□□□□□ -2.05
USP48Q86UV5 RNU6-32P-201ENST00000383948 107 ntBASIC2.26□□□□□ -2.05
USP48Q86UV5 RNU6-13P-201ENST00000384248 107 ntBASIC2.26□□□□□ -2.05
USP48Q86UV5 RNU6-12P-201ENST00000384604 107 ntBASIC2.26□□□□□ -2.05
USP48Q86UV5 RNU6-41P-201ENST00000384741 107 ntBASIC2.26□□□□□ -2.05
USP48Q86UV5 MIR518E-201ENST00000385252 88 ntBASIC2.26□□□□□ -2.05
USP48Q86UV5 SNORD28B-201ENST00000390993 75 ntBASIC2.26□□□□□ -2.05
USP48Q86UV5 AL512326.2-201ENST00000426359 151 ntBASIC2.26□□□□□ -2.05
USP48Q86UV5 RNU7-45P-201ENST00000459460 63 ntBASIC2.26□□□□□ -2.05
USP48Q86UV5 RNU6-1258P-201ENST00000516911 111 ntBASIC2.26□□□□□ -2.05
USP48Q86UV5 MIR9-3-201ENST00000385084 90 ntBASIC2.25□□□□□ -2.05
USP48Q86UV5 RNA5SP144-201ENST00000410846 116 ntBASIC2.25□□□□□ -2.05
USP48Q86UV5 POLR2J4-204ENST00000418424 324 ntBASIC2.25□□□□□ -2.05
USP48Q86UV5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.25□□□□□ -2.05
USP48Q86UV5 MIR8063-201ENST00000621930 81 ntBASIC2.25□□□□□ -2.05
USP48Q86UV5 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.25□□□□□ -2.05
USP48Q86UV5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
USP48Q86UV5 WWP1P1-201ENST00000466609 2769 ntBASIC2.25□□□□□ -2.05
USP48Q86UV5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
USP48Q86UV5 U8.6-201ENST00000364939 135 ntBASIC2.24□□□□□ -2.05
USP48Q86UV5 Y_RNA.348-201ENST00000365403 103 ntBASIC2.24□□□□□ -2.05
USP48Q86UV5 Y_RNA.466-201ENST00000384294 113 ntBASIC2.24□□□□□ -2.05
USP48Q86UV5 RNU6-905P-201ENST00000384434 107 ntBASIC2.24□□□□□ -2.05
USP48Q86UV5 MIR676-201ENST00000390702 67 ntBASIC2.24□□□□□ -2.05
USP48Q86UV5 AL035398.1-201ENST00000430869 322 ntBASIC2.24□□□□□ -2.05
USP48Q86UV5 RNU2-11P-201ENST00000459191 187 ntBASIC2.24□□□□□ -2.05
USP48Q86UV5 RPL39P34-201ENST00000477141 156 ntBASIC2.24□□□□□ -2.05
USP48Q86UV5 RNU6-250P-201ENST00000516958 103 ntBASIC2.24□□□□□ -2.05
USP48Q86UV5 AL513534.2-201ENST00000603836 250 ntBASIC2.24□□□□□ -2.05
USP48Q86UV5 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.24□□□□□ -2.05
USP48Q86UV5 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.24□□□□□ -2.05
USP48Q86UV5 MIR302B-201ENST00000362188 73 ntBASIC2.23□□□□□ -2.05
USP48Q86UV5 RNU6-766P-201ENST00000362478 107 ntBASIC2.23□□□□□ -2.05
USP48Q86UV5 Y_RNA.213-201ENST00000364178 111 ntBASIC2.23□□□□□ -2.05
USP48Q86UV5 Y_RNA.537-201ENST00000384626 109 ntBASIC2.23□□□□□ -2.05
USP48Q86UV5 MIR548D2-201ENST00000384955 97 ntBASIC2.23□□□□□ -2.05
USP48Q86UV5 HSPE1P24-201ENST00000450782 238 ntBASIC2.23□□□□□ -2.05
USP48Q86UV5 RPS29P29-201ENST00000456396 171 ntBASIC2.23□□□□□ -2.05
USP48Q86UV5 RNU7-67P-201ENST00000459003 62 ntBASIC2.23□□□□□ -2.05
USP48Q86UV5 AC005908.1-201ENST00000468701 347 ntBASIC2.23□□□□□ -2.05
USP48Q86UV5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.23□□□□□ -2.05
USP48Q86UV5 RNU7-53P-201ENST00000516705 60 ntBASIC2.23□□□□□ -2.05
USP48Q86UV5 RNU6-537P-201ENST00000517277 103 ntBASIC2.23□□□□□ -2.05
USP48Q86UV5 AC068339.1-201ENST00000526965 141 ntBASIC2.23□□□□□ -2.05
USP48Q86UV5 MIR5582-201ENST00000579697 68 ntBASIC2.23□□□□□ -2.05
USP48Q86UV5 MIR4764-201ENST00000580680 88 ntBASIC2.23□□□□□ -2.05
USP48Q86UV5 BX248123.2-201ENST00000606318 124 ntBASIC2.23□□□□□ -2.05
USP48Q86UV5 AC087741.2-201ENST00000619415 172 ntBASIC2.23□□□□□ -2.05
USP48Q86UV5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.23□□□□□ -2.05
USP48Q86UV5 AC021613.1-201ENST00000623880 111 ntBASIC2.23□□□□□ -2.05
USP48Q86UV5 AL589743.1-201ENST00000551932 2712 ntBASIC2.22□□□□□ -2.05
USP48Q86UV5 AL359851.1-201ENST00000569460 4997 ntBASIC2.22□□□□□ -2.05
USP48Q86UV5 RNU6-640P-201ENST00000363693 105 ntBASIC2.22□□□□□ -2.05
USP48Q86UV5 RNU6-756P-201ENST00000383997 107 ntBASIC2.22□□□□□ -2.05
USP48Q86UV5 SNORA24-201ENST00000384096 131 ntBASIC2.22□□□□□ -2.05
USP48Q86UV5 SNORA51.10-201ENST00000384418 136 ntBASIC2.22□□□□□ -2.05
USP48Q86UV5 MIR520C-201ENST00000385005 87 ntBASIC2.22□□□□□ -2.05
USP48Q86UV5 SNORA26.6-201ENST00000391256 115 ntBASIC2.22□□□□□ -2.05
USP48Q86UV5 RPS29P11-201ENST00000496507 171 ntBASIC2.22□□□□□ -2.05
USP48Q86UV5 RNU6-922P-201ENST00000516753 99 ntBASIC2.22□□□□□ -2.05
USP48Q86UV5 MIR5009-201ENST00000578736 100 ntBASIC2.22□□□□□ -2.05
USP48Q86UV5 AP001318.4-201ENST00000616637 121 ntBASIC2.22□□□□□ -2.05
USP48Q86UV5 AC243994.1-201ENST00000618627 109 ntBASIC2.22□□□□□ -2.05
USP48Q86UV5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.22□□□□□ -2.05
USP48Q86UV5 SNORA51.5-201ENST00000384126 131 ntBASIC2.21□□□□□ -2.06
USP48Q86UV5 SNORA19.1-201ENST00000410656 129 ntBASIC2.21□□□□□ -2.06
USP48Q86UV5 Y_RNA.694-201ENST00000516677 117 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms