Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 RNU6-888P-201ENST00000363010 101 ntBASIC-2.98□□□□□ -2.89
LINC00643Q86TS7 Y_RNA.146-201ENST00000363549 102 ntBASIC-2.98□□□□□ -2.89
LINC00643Q86TS7 Y_RNA.364-201ENST00000365532 101 ntBASIC-2.98□□□□□ -2.89
LINC00643Q86TS7 Y_RNA.454-201ENST00000384224 113 ntBASIC-2.98□□□□□ -2.89
LINC00643Q86TS7 Y_RNA.557-201ENST00000384680 107 ntBASIC-2.98□□□□□ -2.89
LINC00643Q86TS7 SNORD12B-201ENST00000410433 91 ntBASIC-2.98□□□□□ -2.89
LINC00643Q86TS7 AL365203.2-201ENST00000423444 196 ntBASIC-2.98□□□□□ -2.89
LINC00643Q86TS7 RNU6-470P-201ENST00000515954 104 ntBASIC-2.98□□□□□ -2.89
LINC00643Q86TS7 SNORD67.1-201ENST00000516618 108 ntBASIC-2.98□□□□□ -2.89
LINC00643Q86TS7 RNU1-54P-201ENST00000517181 120 ntBASIC-2.98□□□□□ -2.89
LINC00643Q86TS7 MTATP6P24-201ENST00000576835 677 ntBASIC-2.98□□□□□ -2.89
LINC00643Q86TS7 MIR4308-201ENST00000580634 81 ntBASIC-2.98□□□□□ -2.89
LINC00643Q86TS7 RNU6-170P-201ENST00000362832 104 ntBASIC-2.99□□□□□ -2.89
LINC00643Q86TS7 RNU6-961P-201ENST00000363893 105 ntBASIC-2.99□□□□□ -2.89
LINC00643Q86TS7 Y_RNA.446-201ENST00000384178 104 ntBASIC-2.99□□□□□ -2.89
LINC00643Q86TS7 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.99□□□□□ -2.89
LINC00643Q86TS7 AL078595.1-201ENST00000404458 226 ntBASIC-2.99□□□□□ -2.89
LINC00643Q86TS7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-2.99□□□□□ -2.89
LINC00643Q86TS7 AL049861.1-201ENST00000603130 150 ntBASIC-2.99□□□□□ -2.89
LINC00643Q86TS7 AC124303.1-201ENST00000605703 360 ntBASIC-2.99□□□□□ -2.89
LINC00643Q86TS7 AC009161.2-201ENST00000624626 138 ntBASIC-2.99□□□□□ -2.89
LINC00643Q86TS7 RNA5SP26-201ENST00000362406 119 ntBASIC-3□□□□□ -2.89
LINC00643Q86TS7 SNORD114-10-201ENST00000363409 72 ntBASIC-3□□□□□ -2.89
LINC00643Q86TS7 RNU6-540P-201ENST00000384622 101 ntBASIC-3□□□□□ -2.89
LINC00643Q86TS7 MIR517A-201ENST00000385001 87 ntBASIC-3□□□□□ -2.89
LINC00643Q86TS7 AC098826.2-201ENST00000452011 651 ntBASIC-3□□□□□ -2.89
LINC00643Q86TS7 RNU6-1038P-201ENST00000516516 104 ntBASIC-3□□□□□ -2.89
LINC00643Q86TS7 MIR4662B-201ENST00000579498 81 ntBASIC-3□□□□□ -2.89
LINC00643Q86TS7 AP001542.1-201ENST00000591314 200 ntBASIC-3□□□□□ -2.89
LINC00643Q86TS7 RNU6-337P-201ENST00000391243 106 ntBASIC-3.01□□□□□ -2.89
LINC00643Q86TS7 MIR190B-201ENST00000401119 79 ntBASIC-3.01□□□□□ -2.89
LINC00643Q86TS7 RNU6-893P-201ENST00000458841 100 ntBASIC-3.01□□□□□ -2.89
LINC00643Q86TS7 RNU7-87P-201ENST00000459343 62 ntBASIC-3.01□□□□□ -2.89
LINC00643Q86TS7 MIR4464-201ENST00000580818 92 ntBASIC-3.01□□□□□ -2.89
LINC00643Q86TS7 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-3.01□□□□□ -2.89
LINC00643Q86TS7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-3.02□□□□□ -2.89
LINC00643Q86TS7 AL359881.1-201ENST00000602916 267 ntBASIC-3.02□□□□□ -2.89
LINC00643Q86TS7 DLEU2_5.2-201ENST00000610606 84 ntBASIC-3.02□□□□□ -2.89
LINC00643Q86TS7 Y_RNA.295-201ENST00000364918 102 ntBASIC-3.03□□□□□ -2.89
LINC00643Q86TS7 Y_RNA.457-201ENST00000384237 111 ntBASIC-3.03□□□□□ -2.89
LINC00643Q86TS7 RNU2-66P-201ENST00000410650 161 ntBASIC-3.03□□□□□ -2.89
LINC00643Q86TS7 SNX3P1X-201ENST00000414887 175 ntBASIC-3.03□□□□□ -2.89
LINC00643Q86TS7 AL160004.2-201ENST00000432935 350 ntBASIC-3.03□□□□□ -2.89
LINC00643Q86TS7 AC073415.1-201ENST00000449240 153 ntBASIC-3.03□□□□□ -2.89
LINC00643Q86TS7 AC005357.1-201ENST00000588399 301 ntBASIC-3.03□□□□□ -2.89
LINC00643Q86TS7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-3.03□□□□□ -2.89
LINC00643Q86TS7 RNU5F-7P-201ENST00000363696 115 ntBASIC-3.04□□□□□ -2.9
LINC00643Q86TS7 RNU6-704P-201ENST00000364162 103 ntBASIC-3.04□□□□□ -2.9
LINC00643Q86TS7 MIR601-201ENST00000385256 79 ntBASIC-3.04□□□□□ -2.9
LINC00643Q86TS7 Y_RNA.616-201ENST00000410835 95 ntBASIC-3.04□□□□□ -2.9
LINC00643Q86TS7 RNU7-106P-201ENST00000459514 67 ntBASIC-3.04□□□□□ -2.9
LINC00643Q86TS7 RNU6-1258P-201ENST00000516911 111 ntBASIC-3.04□□□□□ -2.9
LINC00643Q86TS7 RNU6-762P-201ENST00000517107 102 ntBASIC-3.04□□□□□ -2.9
LINC00643Q86TS7 RNU6-282P-201ENST00000365357 103 ntBASIC-3.05□□□□□ -2.9
LINC00643Q86TS7 Y_RNA.378-201ENST00000365652 113 ntBASIC-3.05□□□□□ -2.9
LINC00643Q86TS7 Y_RNA.426-201ENST00000384068 113 ntBASIC-3.05□□□□□ -2.9
LINC00643Q86TS7 RNY4P36-201ENST00000391116 96 ntBASIC-3.05□□□□□ -2.9
LINC00643Q86TS7 RNA5SP272-201ENST00000516095 111 ntBASIC-3.05□□□□□ -2.9
LINC00643Q86TS7 RNU6-276P-201ENST00000516114 96 ntBASIC-3.05□□□□□ -2.9
LINC00643Q86TS7 RNU6-1006P-201ENST00000516998 103 ntBASIC-3.05□□□□□ -2.9
LINC00643Q86TS7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-3.05□□□□□ -2.9
LINC00643Q86TS7 MIR4273-201ENST00000582824 84 ntBASIC-3.05□□□□□ -2.9
LINC00643Q86TS7 AC027449.1-201ENST00000608890 407 ntBASIC-3.05□□□□□ -2.9
LINC00643Q86TS7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-3.05□□□□□ -2.9
LINC00643Q86TS7 AC006927.3-201ENST00000638789 384 ntBASIC-3.05□□□□□ -2.9
LINC00643Q86TS7 SNORD114-4-201ENST00000363962 75 ntBASIC-3.06□□□□□ -2.9
LINC00643Q86TS7 SNORD115-27-201ENST00000364430 82 ntBASIC-3.06□□□□□ -2.9
LINC00643Q86TS7 RNU6-157P-201ENST00000383957 107 ntBASIC-3.06□□□□□ -2.9
LINC00643Q86TS7 SNORA19.3-201ENST00000516165 130 ntBASIC-3.06□□□□□ -2.9
LINC00643Q86TS7 AL118558.2-201ENST00000556294 238 ntBASIC-3.06□□□□□ -2.9
LINC00643Q86TS7 AL158211.2-201ENST00000607282 395 ntBASIC-3.06□□□□□ -2.9
LINC00643Q86TS7 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-3.06□□□□□ -2.9
LINC00643Q86TS7 MIR548O2-201ENST00000616090 70 ntBASIC-3.06□□□□□ -2.9
LINC00643Q86TS7 RNU6-996P-201ENST00000365438 107 ntBASIC-3.07□□□□□ -2.9
LINC00643Q86TS7 RNU6-128P-201ENST00000383976 107 ntBASIC-3.07□□□□□ -2.9
LINC00643Q86TS7 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-3.07□□□□□ -2.9
LINC00643Q86TS7 RNU6-365P-201ENST00000517113 106 ntBASIC-3.07□□□□□ -2.9
LINC00643Q86TS7 RNU6-1163P-201ENST00000364516 107 ntBASIC-3.08□□□□□ -2.9
LINC00643Q86TS7 SNORA32-201ENST00000384072 121 ntBASIC-3.08□□□□□ -2.9
LINC00643Q86TS7 RNU6-95P-201ENST00000384697 107 ntBASIC-3.08□□□□□ -2.9
LINC00643Q86TS7 MIR216B-201ENST00000390186 82 ntBASIC-3.08□□□□□ -2.9
LINC00643Q86TS7 RNU7-141P-201ENST00000459304 62 ntBASIC-3.08□□□□□ -2.9
LINC00643Q86TS7 Y_RNA.654-201ENST00000497848 106 ntBASIC-3.08□□□□□ -2.9
LINC00643Q86TS7 SNORD77.4-201ENST00000516158 81 ntBASIC-3.08□□□□□ -2.9
LINC00643Q86TS7 AL021707.8-201ENST00000609428 183 ntBASIC-3.08□□□□□ -2.9
LINC00643Q86TS7 AC011476.5-201ENST00000615594 130 ntBASIC-3.08□□□□□ -2.9
LINC00643Q86TS7 MIR6888-201ENST00000621977 67 ntBASIC-3.08□□□□□ -2.9
LINC00643Q86TS7 RNU6-924P-201ENST00000362926 108 ntBASIC-3.09□□□□□ -2.9
LINC00643Q86TS7 Y_RNA.171-201ENST00000363760 102 ntBASIC-3.09□□□□□ -2.9
LINC00643Q86TS7 Y_RNA.180-201ENST00000363867 113 ntBASIC-3.09□□□□□ -2.9
LINC00643Q86TS7 Y_RNA.207-201ENST00000364142 106 ntBASIC-3.09□□□□□ -2.9
LINC00643Q86TS7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-3.09□□□□□ -2.9
LINC00643Q86TS7 FGF7P6-202ENST00000451282 293 ntBASIC-3.09□□□□□ -2.9
LINC00643Q86TS7 AC091951.2-201ENST00000500762 203 ntBASIC-3.09□□□□□ -2.9
LINC00643Q86TS7 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-3.09□□□□□ -2.9
LINC00643Q86TS7 AC019193.3-201ENST00000609144 554 ntBASIC-3.09□□□□□ -2.9
LINC00643Q86TS7 AP001506.1-201ENST00000615444 211 ntBASIC-3.09□□□□□ -2.9
LINC00643Q86TS7 Y_RNA.35-201ENST00000362601 101 ntBASIC-3.1□□□□□ -2.91
LINC00643Q86TS7 Y_RNA.162-201ENST00000363683 102 ntBASIC-3.1□□□□□ -2.91
LINC00643Q86TS7 Y_RNA.447-201ENST00000384184 113 ntBASIC-3.1□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 180.3 ms