Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
RUFY4Q6ZNE9 RNY4P18-201ENST00000391107 89 ntBASIC2.09□□□□□ -2.07
RUFY4Q6ZNE9 SNORA17.3-201ENST00000391159 129 ntBASIC2.09□□□□□ -2.07
RUFY4Q6ZNE9 POLR2J4-204ENST00000418424 324 ntBASIC2.09□□□□□ -2.07
RUFY4Q6ZNE9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.09□□□□□ -2.07
RUFY4Q6ZNE9 RPS29P11-201ENST00000496507 171 ntBASIC2.09□□□□□ -2.07
RUFY4Q6ZNE9 AL096840.1-201ENST00000603287 93 ntBASIC2.09□□□□□ -2.07
RUFY4Q6ZNE9 MIR8055-201ENST00000610739 97 ntBASIC2.09□□□□□ -2.07
RUFY4Q6ZNE9 GHRLOS.1-201ENST00000610995 70 ntBASIC2.09□□□□□ -2.07
RUFY4Q6ZNE9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.09□□□□□ -2.07
RUFY4Q6ZNE9 MIR6841-201ENST00000637129 72 ntBASIC2.09□□□□□ -2.07
RUFY4Q6ZNE9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.09□□□□□ -2.07
RUFY4Q6ZNE9 MIR378A-201ENST00000362177 66 ntBASIC2.08□□□□□ -2.08
RUFY4Q6ZNE9 RNA5SP48-201ENST00000363969 126 ntBASIC2.08□□□□□ -2.08
RUFY4Q6ZNE9 SNORD41-201ENST00000386967 70 ntBASIC2.08□□□□□ -2.08
RUFY4Q6ZNE9 RNU6-913P-201ENST00000390913 95 ntBASIC2.08□□□□□ -2.08
RUFY4Q6ZNE9 RNA5SP489-201ENST00000410986 109 ntBASIC2.08□□□□□ -2.08
RUFY4Q6ZNE9 AC063976.4-201ENST00000421971 163 ntBASIC2.08□□□□□ -2.08
RUFY4Q6ZNE9 AC108667.1-201ENST00000428618 249 ntBASIC2.08□□□□□ -2.08
RUFY4Q6ZNE9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.08□□□□□ -2.08
RUFY4Q6ZNE9 AC007012.1-201ENST00000567192 175 ntBASIC2.08□□□□□ -2.08
RUFY4Q6ZNE9 MIR3163-201ENST00000581592 73 ntBASIC2.08□□□□□ -2.08
RUFY4Q6ZNE9 MIR4781-201ENST00000585250 76 ntBASIC2.08□□□□□ -2.08
RUFY4Q6ZNE9 snoU13.31-201ENST00000607291 104 ntBASIC2.08□□□□□ -2.08
RUFY4Q6ZNE9 MIR8081-201ENST00000611533 95 ntBASIC2.08□□□□□ -2.08
RUFY4Q6ZNE9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RUFY4Q6ZNE9 MIR302D-201ENST00000362275 68 ntBASIC2.07□□□□□ -2.08
RUFY4Q6ZNE9 Y_RNA.35-201ENST00000362601 101 ntBASIC2.07□□□□□ -2.08
RUFY4Q6ZNE9 SNORD115-2-201ENST00000362842 82 ntBASIC2.07□□□□□ -2.08
RUFY4Q6ZNE9 Y_RNA.281-201ENST00000364774 94 ntBASIC2.07□□□□□ -2.08
RUFY4Q6ZNE9 SNORD115-20-201ENST00000365099 82 ntBASIC2.07□□□□□ -2.08
RUFY4Q6ZNE9 Y_RNA.354-201ENST00000365448 111 ntBASIC2.07□□□□□ -2.08
RUFY4Q6ZNE9 Y_RNA.531-201ENST00000384589 121 ntBASIC2.07□□□□□ -2.08
RUFY4Q6ZNE9 MIR548A1-201ENST00000385041 97 ntBASIC2.07□□□□□ -2.08
RUFY4Q6ZNE9 RPS3AP1-201ENST00000413190 320 ntBASIC2.07□□□□□ -2.08
RUFY4Q6ZNE9 SNORA25.15-201ENST00000516487 89 ntBASIC2.07□□□□□ -2.08
RUFY4Q6ZNE9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.07□□□□□ -2.08
RUFY4Q6ZNE9 MIR4251-201ENST00000635819 61 ntBASIC2.07□□□□□ -2.08
RUFY4Q6ZNE9 Z97988.1-201ENST00000637697 135 ntBASIC2.07□□□□□ -2.08
RUFY4Q6ZNE9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
RUFY4Q6ZNE9 SNORA22.1-201ENST00000362701 134 ntBASIC2.06□□□□□ -2.08
RUFY4Q6ZNE9 RNU6-755P-201ENST00000364400 103 ntBASIC2.06□□□□□ -2.08
RUFY4Q6ZNE9 RNU6-44P-201ENST00000384045 107 ntBASIC2.06□□□□□ -2.08
RUFY4Q6ZNE9 MIR1287-201ENST00000408492 90 ntBASIC2.06□□□□□ -2.08
RUFY4Q6ZNE9 SNORD111.1-201ENST00000516421 86 ntBASIC2.06□□□□□ -2.08
RUFY4Q6ZNE9 AC004812.1-201ENST00000540773 146 ntBASIC2.06□□□□□ -2.08
RUFY4Q6ZNE9 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RUFY4Q6ZNE9 SNORA1.1-201ENST00000364671 133 ntBASIC2.05□□□□□ -2.08
RUFY4Q6ZNE9 HSPE1P24-201ENST00000450782 238 ntBASIC2.05□□□□□ -2.08
RUFY4Q6ZNE9 RNU6-922P-201ENST00000516753 99 ntBASIC2.05□□□□□ -2.08
RUFY4Q6ZNE9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.05□□□□□ -2.08
RUFY4Q6ZNE9 AC084768.2-201ENST00000622736 221 ntBASIC2.05□□□□□ -2.08
RUFY4Q6ZNE9 HMGN2P19-201ENST00000425149 265 ntBASIC2.04□□□□□ -2.08
RUFY4Q6ZNE9 RNU7-113P-201ENST00000459273 62 ntBASIC2.04□□□□□ -2.08
RUFY4Q6ZNE9 RNU7-45P-201ENST00000459460 63 ntBASIC2.04□□□□□ -2.08
RUFY4Q6ZNE9 RPS23P4-201ENST00000487908 423 ntBASIC2.04□□□□□ -2.08
RUFY4Q6ZNE9 AC113410.1-201ENST00000505029 247 ntBASIC2.04□□□□□ -2.08
RUFY4Q6ZNE9 AC012493.3-201ENST00000604494 112 ntBASIC2.04□□□□□ -2.08
RUFY4Q6ZNE9 SNORD1A-201ENST00000364968 72 ntBASIC2.03□□□□□ -2.08
RUFY4Q6ZNE9 RNU6-1065P-201ENST00000384513 106 ntBASIC2.03□□□□□ -2.08
RUFY4Q6ZNE9 SNORD13-201ENST00000459299 104 ntBASIC2.03□□□□□ -2.08
RUFY4Q6ZNE9 AC079140.2-201ENST00000506193 142 ntBASIC2.03□□□□□ -2.08
RUFY4Q6ZNE9 MIR8063-201ENST00000621930 81 ntBASIC2.03□□□□□ -2.08
RUFY4Q6ZNE9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
RUFY4Q6ZNE9 RNA5SP190-201ENST00000365222 118 ntBASIC2.02□□□□□ -2.09
RUFY4Q6ZNE9 RNU6-1104P-201ENST00000384723 104 ntBASIC2.02□□□□□ -2.09
RUFY4Q6ZNE9 AL512326.2-201ENST00000426359 151 ntBASIC2.02□□□□□ -2.09
RUFY4Q6ZNE9 RPL39P39-201ENST00000455840 151 ntBASIC2.02□□□□□ -2.09
RUFY4Q6ZNE9 RPL30P7-201ENST00000479312 323 ntBASIC2.02□□□□□ -2.09
RUFY4Q6ZNE9 RNU7-41P-201ENST00000515917 61 ntBASIC2.02□□□□□ -2.09
RUFY4Q6ZNE9 AL589743.1-201ENST00000551932 2712 ntBASIC2.01□□□□□ -2.09
RUFY4Q6ZNE9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RUFY4Q6ZNE9 Y_RNA.49-201ENST00000362714 112 ntBASIC2.01□□□□□ -2.09
RUFY4Q6ZNE9 MIR548D2-201ENST00000384955 97 ntBASIC2.01□□□□□ -2.09
RUFY4Q6ZNE9 RPL39P34-201ENST00000477141 156 ntBASIC2.01□□□□□ -2.09
RUFY4Q6ZNE9 PDCD5P2-201ENST00000507570 312 ntBASIC2.01□□□□□ -2.09
RUFY4Q6ZNE9 CYP3A52P-201ENST00000563326 91 ntBASIC2.01□□□□□ -2.09
RUFY4Q6ZNE9 AP000648.3-201ENST00000623539 4507 ntBASIC2.01□□□□□ -2.09
RUFY4Q6ZNE9 Y_RNA.85-201ENST00000363014 111 ntBASIC2□□□□□ -2.09
RUFY4Q6ZNE9 RNY1P10-201ENST00000363268 113 ntBASIC2□□□□□ -2.09
RUFY4Q6ZNE9 SNORD12C-201ENST00000386307 89 ntBASIC2□□□□□ -2.09
RUFY4Q6ZNE9 RNU4-69P-201ENST00000410677 143 ntBASIC2□□□□□ -2.09
RUFY4Q6ZNE9 RNU6-1190P-201ENST00000410811 104 ntBASIC2□□□□□ -2.09
RUFY4Q6ZNE9 AC008834.1-201ENST00000511612 175 ntBASIC2□□□□□ -2.09
RUFY4Q6ZNE9 AC022523.2-201ENST00000561045 150 ntBASIC2□□□□□ -2.09
RUFY4Q6ZNE9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.99□□□□□ -2.09
RUFY4Q6ZNE9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RUFY4Q6ZNE9 Y_RNA.362-201ENST00000365518 110 ntBASIC1.99□□□□□ -2.09
RUFY4Q6ZNE9 SNORA22-201ENST00000383907 134 ntBASIC1.99□□□□□ -2.09
RUFY4Q6ZNE9 MT-TI-201ENST00000387365 69 ntBASIC1.99□□□□□ -2.09
RUFY4Q6ZNE9 AC027119.1-201ENST00000440877 241 ntBASIC1.99□□□□□ -2.09
RUFY4Q6ZNE9 AC005908.1-201ENST00000468701 347 ntBASIC1.99□□□□□ -2.09
RUFY4Q6ZNE9 MIR548AO-201ENST00000579992 96 ntBASIC1.99□□□□□ -2.09
RUFY4Q6ZNE9 Y_RNA.171-201ENST00000363760 102 ntBASIC1.98□□□□□ -2.09
RUFY4Q6ZNE9 SNORD38B-201ENST00000384690 67 ntBASIC1.98□□□□□ -2.09
RUFY4Q6ZNE9 SNORA67.5-201ENST00000391036 107 ntBASIC1.98□□□□□ -2.09
RUFY4Q6ZNE9 RNU1-78P-201ENST00000391248 165 ntBASIC1.98□□□□□ -2.09
RUFY4Q6ZNE9 HMGN1P33-201ENST00000432945 451 ntBASIC1.98□□□□□ -2.09
RUFY4Q6ZNE9 AC009474.2-201ENST00000451383 136 ntBASIC1.98□□□□□ -2.09
RUFY4Q6ZNE9 AL133373.1-201ENST00000497098 94 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 203.8 ms