| FOXD4L3 | Q6VB84 | RNU7-45P-201 | ENST00000459460 | 63 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | UBL5P3-201 | ENST00000475112 | 231 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | SLC4A7-201 | ENST00000295736 | 7757 nt | APPRIS P3 TSL 1 (best) BASIC | 2.84 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | MIR9-1-201 | ENST00000385198 | 89 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | SNORA11.4-201 | ENST00000408823 | 129 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | Y_RNA.596-201 | ENST00000410462 | 109 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | SNORD4B-201 | ENST00000459083 | 72 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | RNU2-19P-201 | ENST00000517288 | 84 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | AC026271.5-201 | ENST00000577873 | 130 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | AL033523.1-201 | ENST00000605153 | 153 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | AC020891.4-201 | ENST00000605745 | 93 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| FOXD4L3 | Q6VB84 | NEDD4-205 | ENST00000506154 | 6751 nt | TSL 1 (best) BASIC | 2.84 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | AL442644.1-201 | ENST00000454390 | 3105 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU6-161P-201 | ENST00000363051 | 106 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNA5SP133-201 | ENST00000363368 | 119 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNA5SP493-201 | ENST00000364115 | 91 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU6-865P-201 | ENST00000364772 | 107 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU6-163P-201 | ENST00000384396 | 106 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | MIR9-2-201 | ENST00000384838 | 87 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | MIR144-201 | ENST00000384886 | 86 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU6-1307P-201 | ENST00000391012 | 103 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNA5SP320-201 | ENST00000516263 | 124 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | DNAJC19P9-201 | ENST00000555084 | 351 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | MIR4796-201 | ENST00000580742 | 81 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | FAM106DP-201 | ENST00000586416 | 501 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | AC103810.6-201 | ENST00000606708 | 136 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | SNORA28-201 | ENST00000606769 | 126 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | AC027279.3-201 | ENST00000625055 | 122 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | AGTPBP1-205 | ENST00000376083 | 4208 nt | APPRIS P1 TSL 1 (best) BASIC | 2.83 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | AGL-204 | ENST00000370161 | 6923 nt | TSL 5 BASIC | 2.83 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | TANK-201 | ENST00000259075 | 2152 nt | APPRIS P1 TSL 1 (best) BASIC | 2.83 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | ZMYM1-203 | ENST00000373330 | 4203 nt | APPRIS P1 TSL 1 (best) BASIC | 2.82 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | ICE2P2-201 | ENST00000483823 | 2787 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU6-859P-201 | ENST00000362728 | 107 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | SNORA70.7-201 | ENST00000384159 | 133 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU6-424P-201 | ENST00000384367 | 105 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | Y_RNA.494-201 | ENST00000384432 | 111 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | SNORA26.6-201 | ENST00000391256 | 115 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | STAG3L5P-204 | ENST00000443759 | 179 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNA5SP233-201 | ENST00000459153 | 113 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | AC234781.5-201 | ENST00000508429 | 271 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU7-53P-201 | ENST00000516705 | 60 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | GTF3AP2-201 | ENST00000557014 | 266 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | MIR3169-201 | ENST00000578032 | 83 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | AC005520.4-201 | ENST00000604337 | 90 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | AL627230.6-201 | ENST00000611129 | 280 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | AC012676.2-201 | ENST00000619258 | 186 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | MIR664A-201 | ENST00000626086 | 82 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | LCORL-202 | ENST00000382224 | 4984 nt | APPRIS ALT2 TSL 5 BASIC | 2.82 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | CSNK1G3-202 | ENST00000360683 | 4047 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.82 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | Z82195.2-201 | ENST00000612348 | 18351 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | HIF1A-201 | ENST00000323441 | 3555 nt | TSL 1 (best) BASIC | 2.81 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU6-23P-201 | ENST00000363283 | 107 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNA5SP456-201 | ENST00000364002 | 114 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | Y_RNA.264-201 | ENST00000364665 | 102 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | SNORA2B-201 | ENST00000384583 | 137 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | AL513328.1-201 | ENST00000446460 | 224 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | AC073127.1-201 | ENST00000447336 | 333 nt | TSL 3 BASIC | 2.81 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | AC055731.1-201 | ENST00000474387 | 401 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNA5SP402-201 | ENST00000517148 | 110 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | MIR3124-201 | ENST00000582636 | 67 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | MIR4484-201 | ENST00000582855 | 83 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | IDE-201 | ENST00000265986 | 5877 nt | APPRIS P1 TSL 1 (best) BASIC | 2.81 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | AC007370.2-201 | ENST00000506899 | 2694 nt | TSL 5 BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | MIER3-202 | ENST00000381199 | 5188 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | Y_RNA.508-201 | ENST00000384502 | 114 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | MIR520H-201 | ENST00000385126 | 88 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNA5SP109-201 | ENST00000391010 | 116 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | MIR1267-201 | ENST00000408723 | 78 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU6-447P-201 | ENST00000410293 | 104 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU6-1118P-201 | ENST00000410382 | 104 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU6-1076P-201 | ENST00000410397 | 104 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU6-355P-201 | ENST00000410427 | 104 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU6-791P-201 | ENST00000410467 | 104 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU6-705P-201 | ENST00000410601 | 104 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU6-1100P-201 | ENST00000410691 | 104 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU6-860P-201 | ENST00000410860 | 104 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU6-1217P-201 | ENST00000411276 | 104 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU6-785P-201 | ENST00000411324 | 104 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | AC074348.1-201 | ENST00000426503 | 132 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU6-1108P-201 | ENST00000516308 | 104 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | AC006023.1-201 | ENST00000603944 | 259 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | AL512598.1-201 | ENST00000610158 | 273 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | ZNRD1-AS1_1.6-201 | ENST00000610339 | 68 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | U6.90-201 | ENST00000614007 | 104 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | Hammerhead_HH9.1-201 | ENST00000616606 | 77 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | U6.70-201 | ENST00000620287 | 104 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | MIR8054-201 | ENST00000620877 | 86 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | AC245060.5-201 | ENST00000610778 | 3293 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | NAALADL2-203 | ENST00000454872 | 9865 nt | APPRIS P1 TSL 1 (best) BASIC | 2.8 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | MIRLET7C-201 | ENST00000362160 | 84 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNA5SP138-201 | ENST00000365098 | 114 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | MIR635-201 | ENST00000384830 | 98 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU6-303P-201 | ENST00000517091 | 106 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU7-156P-201 | ENST00000517214 | 74 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | AL161716.1-201 | ENST00000606365 | 273 nt | TSL 5 BASIC | 2.79 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | MIR6717-201 | ENST00000622747 | 73 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | SNORA1.2-201 | ENST00000365189 | 134 nt | BASIC | 2.78 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | Y_RNA.448-201 | ENST00000384185 | 108 nt | BASIC | 2.78 | □□□□□ -1.96 | | |
| FOXD4L3 | Q6VB84 | RNU6-1241P-201 | ENST00000384536 | 107 nt | BASIC | 2.78 | □□□□□ -1.96 | | |