Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 AC093729.1-201ENST00000513074 128 ntBASIC2.23□□□□□ -2.05
CDPF1Q6NVV7 AC141846.1-201ENST00000568348 142 ntBASIC2.23□□□□□ -2.05
CDPF1Q6NVV7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.22□□□□□ -2.05
CDPF1Q6NVV7 RNA5SP237-201ENST00000410414 113 ntBASIC2.22□□□□□ -2.05
CDPF1Q6NVV7 AC004965.1-201ENST00000413033 213 ntBASIC2.22□□□□□ -2.05
CDPF1Q6NVV7 RNU7-41P-201ENST00000515917 61 ntBASIC2.22□□□□□ -2.05
CDPF1Q6NVV7 SNORA31.25-201ENST00000517242 134 ntBASIC2.22□□□□□ -2.05
CDPF1Q6NVV7 AC133485.1-201ENST00000567176 124 ntBASIC2.22□□□□□ -2.05
CDPF1Q6NVV7 MIR4513-201ENST00000581077 86 ntBASIC2.22□□□□□ -2.05
CDPF1Q6NVV7 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.22□□□□□ -2.05
CDPF1Q6NVV7 MIR7112-201ENST00000616126 65 ntBASIC2.22□□□□□ -2.05
CDPF1Q6NVV7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.22□□□□□ -2.05
CDPF1Q6NVV7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.22□□□□□ -2.05
CDPF1Q6NVV7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.22□□□□□ -2.05
CDPF1Q6NVV7 Z82195.2-201ENST00000612348 18351 ntBASIC2.22□□□□□ -2.05
CDPF1Q6NVV7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDPF1Q6NVV7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CDPF1Q6NVV7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CDPF1Q6NVV7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CDPF1Q6NVV7 RNY1P2-201ENST00000364820 117 ntBASIC2.21□□□□□ -2.06
CDPF1Q6NVV7 RPS29P11-201ENST00000496507 171 ntBASIC2.21□□□□□ -2.06
CDPF1Q6NVV7 IGKV2-26-201ENST00000518305 343 ntBASIC2.21□□□□□ -2.06
CDPF1Q6NVV7 DEFB122-202ENST00000569013 197 ntBASIC2.21□□□□□ -2.06
CDPF1Q6NVV7 AL662814.1-201ENST00000617364 121 ntBASIC2.21□□□□□ -2.06
CDPF1Q6NVV7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
CDPF1Q6NVV7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CDPF1Q6NVV7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CDPF1Q6NVV7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.2□□□□□ -2.06
CDPF1Q6NVV7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CDPF1Q6NVV7 MIR6073-201ENST00000352083 89 ntBASIC2.2□□□□□ -2.06
CDPF1Q6NVV7 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CDPF1Q6NVV7 RNA5SP274-201ENST00000410484 108 ntBASIC2.2□□□□□ -2.06
CDPF1Q6NVV7 AC009474.2-201ENST00000451383 136 ntBASIC2.2□□□□□ -2.06
CDPF1Q6NVV7 SNORA59A-201ENST00000459326 152 ntBASIC2.2□□□□□ -2.06
CDPF1Q6NVV7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.2□□□□□ -2.06
CDPF1Q6NVV7 MIR4529-201ENST00000578110 78 ntBASIC2.2□□□□□ -2.06
CDPF1Q6NVV7 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.2□□□□□ -2.06
CDPF1Q6NVV7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.19□□□□□ -2.06
CDPF1Q6NVV7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CDPF1Q6NVV7 RNA5SP133-201ENST00000363368 119 ntBASIC2.19□□□□□ -2.06
CDPF1Q6NVV7 Y_RNA.168-201ENST00000363740 102 ntBASIC2.19□□□□□ -2.06
CDPF1Q6NVV7 RNU6-949P-201ENST00000384040 107 ntBASIC2.19□□□□□ -2.06
CDPF1Q6NVV7 MIR128-1-201ENST00000384921 82 ntBASIC2.19□□□□□ -2.06
CDPF1Q6NVV7 AC073261.1-201ENST00000429409 121 ntBASIC2.19□□□□□ -2.06
CDPF1Q6NVV7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.19□□□□□ -2.06
CDPF1Q6NVV7 MIR4712-201ENST00000583750 82 ntBASIC2.19□□□□□ -2.06
CDPF1Q6NVV7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CDPF1Q6NVV7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
CDPF1Q6NVV7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
CDPF1Q6NVV7 SNORD115-37-201ENST00000363768 82 ntBASIC2.18□□□□□ -2.06
CDPF1Q6NVV7 RNA5SP48-201ENST00000363969 126 ntBASIC2.18□□□□□ -2.06
CDPF1Q6NVV7 SNORA48.2-201ENST00000390926 124 ntBASIC2.18□□□□□ -2.06
CDPF1Q6NVV7 AC244023.1-201ENST00000426884 112 ntBASIC2.18□□□□□ -2.06
CDPF1Q6NVV7 AC140658.3-201ENST00000567603 271 ntBASIC2.18□□□□□ -2.06
CDPF1Q6NVV7 AP000753.3-201ENST00000604083 169 ntBASIC2.18□□□□□ -2.06
CDPF1Q6NVV7 AC242498.1-201ENST00000604134 111 ntBASIC2.18□□□□□ -2.06
CDPF1Q6NVV7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CDPF1Q6NVV7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CDPF1Q6NVV7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDPF1Q6NVV7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.17□□□□□ -2.06
CDPF1Q6NVV7 SNORA6-201ENST00000384033 151 ntBASIC2.17□□□□□ -2.06
CDPF1Q6NVV7 RNU6-519P-201ENST00000410590 108 ntBASIC2.17□□□□□ -2.06
CDPF1Q6NVV7 AL161935.2-201ENST00000414627 60 ntBASIC2.17□□□□□ -2.06
CDPF1Q6NVV7 AC027119.1-201ENST00000440877 241 ntBASIC2.17□□□□□ -2.06
CDPF1Q6NVV7 snoU13.2-201ENST00000459201 104 ntBASIC2.17□□□□□ -2.06
CDPF1Q6NVV7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.17□□□□□ -2.06
CDPF1Q6NVV7 AC121758.2-201ENST00000553271 193 ntBASIC2.17□□□□□ -2.06
CDPF1Q6NVV7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.17□□□□□ -2.06
CDPF1Q6NVV7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.17□□□□□ -2.06
CDPF1Q6NVV7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.17□□□□□ -2.06
CDPF1Q6NVV7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDPF1Q6NVV7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CDPF1Q6NVV7 MIR422A-201ENST00000362286 90 ntBASIC2.16□□□□□ -2.06
CDPF1Q6NVV7 SNORA3A-201ENST00000364113 130 ntBASIC2.16□□□□□ -2.06
CDPF1Q6NVV7 AC087499.7-201ENST00000441958 109 ntBASIC2.16□□□□□ -2.06
CDPF1Q6NVV7 RNA5SP445-201ENST00000515889 115 ntBASIC2.16□□□□□ -2.06
CDPF1Q6NVV7 PRELID3BP2-201ENST00000605362 201 ntBASIC2.16□□□□□ -2.06
CDPF1Q6NVV7 MIR8066-201ENST00000617280 78 ntBASIC2.16□□□□□ -2.06
CDPF1Q6NVV7 WWP1P1-201ENST00000466609 2769 ntBASIC2.16□□□□□ -2.06
CDPF1Q6NVV7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
CDPF1Q6NVV7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.06
CDPF1Q6NVV7 RNA5SP374-201ENST00000362939 125 ntBASIC2.15□□□□□ -2.07
CDPF1Q6NVV7 Y_RNA.500-201ENST00000384466 111 ntBASIC2.15□□□□□ -2.07
CDPF1Q6NVV7 MIR1236-201ENST00000408340 102 ntBASIC2.15□□□□□ -2.07
CDPF1Q6NVV7 COTL1P1-201ENST00000422309 375 ntBASIC2.15□□□□□ -2.07
CDPF1Q6NVV7 S100A11P2-201ENST00000467589 312 ntBASIC2.15□□□□□ -2.07
CDPF1Q6NVV7 RNA5SP341-201ENST00000516261 117 ntBASIC2.15□□□□□ -2.07
CDPF1Q6NVV7 SNORD111.1-201ENST00000516421 86 ntBASIC2.15□□□□□ -2.07
CDPF1Q6NVV7 RNU7-193P-201ENST00000516723 65 ntBASIC2.15□□□□□ -2.07
CDPF1Q6NVV7 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.15□□□□□ -2.07
CDPF1Q6NVV7 AC007318.2-201ENST00000620999 243 ntBASIC2.15□□□□□ -2.07
CDPF1Q6NVV7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CDPF1Q6NVV7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
CDPF1Q6NVV7 AC073325.2-201ENST00000339545 159 ntBASIC2.14□□□□□ -2.07
CDPF1Q6NVV7 MIR563-201ENST00000385080 79 ntBASIC2.14□□□□□ -2.07
CDPF1Q6NVV7 RN7SL863P-201ENST00000462370 296 ntBASIC2.14□□□□□ -2.07
CDPF1Q6NVV7 AC090897.1-201ENST00000580909 226 ntBASIC2.14□□□□□ -2.07
CDPF1Q6NVV7 AL365361.1-201ENST00000566942 3481 ntBASIC2.14□□□□□ -2.07
CDPF1Q6NVV7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CDPF1Q6NVV7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms