Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 RPL23AP42-201ENST00000471152 471 ntBASIC1.94□□□□□ -2.1
E4F1Q66K89 AC019176.1-201ENST00000518519 225 ntBASIC1.94□□□□□ -2.1
E4F1Q66K89 AL357312.1-201ENST00000603879 298 ntBASIC1.94□□□□□ -2.1
E4F1Q66K89 MIR8055-201ENST00000610739 97 ntBASIC1.94□□□□□ -2.1
E4F1Q66K89 Y_RNA.299-201ENST00000364973 94 ntBASIC1.93□□□□□ -2.1
E4F1Q66K89 MIR30A-201ENST00000385092 71 ntBASIC1.93□□□□□ -2.1
E4F1Q66K89 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
E4F1Q66K89 RNU4-69P-201ENST00000410677 143 ntBASIC1.93□□□□□ -2.1
E4F1Q66K89 RPL39P34-201ENST00000477141 156 ntBASIC1.93□□□□□ -2.1
E4F1Q66K89 MIR548AE2-201ENST00000583456 67 ntBASIC1.93□□□□□ -2.1
E4F1Q66K89 GHRLOS.1-201ENST00000610995 70 ntBASIC1.93□□□□□ -2.1
E4F1Q66K89 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
E4F1Q66K89 SNORA32-201ENST00000384072 121 ntBASIC1.92□□□□□ -2.1
E4F1Q66K89 RNU6-106P-201ENST00000384405 107 ntBASIC1.92□□□□□ -2.1
E4F1Q66K89 RNU6-554P-201ENST00000410466 106 ntBASIC1.92□□□□□ -2.1
E4F1Q66K89 AC009474.2-201ENST00000451383 136 ntBASIC1.92□□□□□ -2.1
E4F1Q66K89 SNORA44.1-201ENST00000517031 108 ntBASIC1.92□□□□□ -2.1
E4F1Q66K89 MIR3192-201ENST00000584920 77 ntBASIC1.92□□□□□ -2.1
E4F1Q66K89 AL627230.6-201ENST00000611129 280 ntBASIC1.92□□□□□ -2.1
E4F1Q66K89 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
E4F1Q66K89 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.92□□□□□ -2.1
E4F1Q66K89 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
E4F1Q66K89 RNA5SP48-201ENST00000363969 126 ntBASIC1.91□□□□□ -2.1
E4F1Q66K89 U8.6-201ENST00000364939 135 ntBASIC1.91□□□□□ -2.1
E4F1Q66K89 RNU6-1014P-201ENST00000383940 103 ntBASIC1.91□□□□□ -2.1
E4F1Q66K89 AC245047.7-201ENST00000440265 293 ntBASIC1.91□□□□□ -2.1
E4F1Q66K89 RPL39P25-201ENST00000449384 154 ntBASIC1.91□□□□□ -2.1
E4F1Q66K89 AC068339.1-201ENST00000526965 141 ntBASIC1.91□□□□□ -2.1
E4F1Q66K89 MIR3613-201ENST00000579844 87 ntBASIC1.91□□□□□ -2.1
E4F1Q66K89 AL096861.1-201ENST00000610899 123 ntBASIC1.91□□□□□ -2.1
E4F1Q66K89 AC087741.2-201ENST00000619415 172 ntBASIC1.91□□□□□ -2.1
E4F1Q66K89 Z97988.1-201ENST00000637697 135 ntBASIC1.91□□□□□ -2.1
E4F1Q66K89 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
E4F1Q66K89 SNORD115-2-201ENST00000362842 82 ntBASIC1.9□□□□□ -2.11
E4F1Q66K89 Y_RNA.163-201ENST00000363702 113 ntBASIC1.9□□□□□ -2.11
E4F1Q66K89 Y_RNA.309-201ENST00000365046 111 ntBASIC1.9□□□□□ -2.11
E4F1Q66K89 SNORD115-20-201ENST00000365099 82 ntBASIC1.9□□□□□ -2.11
E4F1Q66K89 Y_RNA.354-201ENST00000365448 111 ntBASIC1.9□□□□□ -2.11
E4F1Q66K89 SNORD77B-201ENST00000391112 67 ntBASIC1.9□□□□□ -2.11
E4F1Q66K89 MIR1302-5-201ENST00000408164 150 ntBASIC1.9□□□□□ -2.11
E4F1Q66K89 RNU6-602P-201ENST00000411155 105 ntBASIC1.9□□□□□ -2.11
E4F1Q66K89 AC090844.1-201ENST00000422019 156 ntBASIC1.9□□□□□ -2.11
E4F1Q66K89 AC079140.2-201ENST00000506193 142 ntBASIC1.9□□□□□ -2.11
E4F1Q66K89 MIR3618-201ENST00000580330 88 ntBASIC1.9□□□□□ -2.11
E4F1Q66K89 AL096840.1-201ENST00000603287 93 ntBASIC1.9□□□□□ -2.11
E4F1Q66K89 SNORA25.3-201ENST00000363205 127 ntBASIC1.89□□□□□ -2.11
E4F1Q66K89 RNU6-816P-201ENST00000390914 107 ntBASIC1.89□□□□□ -2.11
E4F1Q66K89 RNU6-1268P-201ENST00000391214 107 ntBASIC1.89□□□□□ -2.11
E4F1Q66K89 RNU6-1239P-201ENST00000391310 107 ntBASIC1.89□□□□□ -2.11
E4F1Q66K89 AC019129.1-201ENST00000403786 261 ntBASIC1.89□□□□□ -2.11
E4F1Q66K89 RPL39P39-201ENST00000455840 151 ntBASIC1.89□□□□□ -2.11
E4F1Q66K89 MIR5009-201ENST00000578736 100 ntBASIC1.89□□□□□ -2.11
E4F1Q66K89 MIR3937-201ENST00000580135 106 ntBASIC1.89□□□□□ -2.11
E4F1Q66K89 Y_RNA.773-201ENST00000607168 90 ntBASIC1.89□□□□□ -2.11
E4F1Q66K89 AL162726.3-218ENST00000636401 95 ntBASIC1.89□□□□□ -2.11
E4F1Q66K89 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
E4F1Q66K89 SNORD1A-201ENST00000364968 72 ntBASIC1.88□□□□□ -2.11
E4F1Q66K89 SNORD38B-201ENST00000384690 67 ntBASIC1.88□□□□□ -2.11
E4F1Q66K89 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.88□□□□□ -2.11
E4F1Q66K89 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.88□□□□□ -2.11
E4F1Q66K89 RNU6-250P-201ENST00000516958 103 ntBASIC1.88□□□□□ -2.11
E4F1Q66K89 MIR4648-201ENST00000580107 72 ntBASIC1.88□□□□□ -2.11
E4F1Q66K89 MIR8065-201ENST00000620577 100 ntBASIC1.88□□□□□ -2.11
E4F1Q66K89 SNORD38B-202ENST00000625943 69 ntBASIC1.88□□□□□ -2.11
E4F1Q66K89 MIR1255B1-201ENST00000636325 63 ntBASIC1.88□□□□□ -2.11
E4F1Q66K89 RNA5SP126-201ENST00000365092 109 ntBASIC1.87□□□□□ -2.11
E4F1Q66K89 Y_RNA.323-201ENST00000365157 109 ntBASIC1.87□□□□□ -2.11
E4F1Q66K89 RNU6-756P-201ENST00000383997 107 ntBASIC1.87□□□□□ -2.11
E4F1Q66K89 SNORA51.5-201ENST00000384126 131 ntBASIC1.87□□□□□ -2.11
E4F1Q66K89 SNORA18-201ENST00000384416 132 ntBASIC1.87□□□□□ -2.11
E4F1Q66K89 Y_RNA.507-201ENST00000384500 99 ntBASIC1.87□□□□□ -2.11
E4F1Q66K89 RNU6-342P-201ENST00000384521 104 ntBASIC1.87□□□□□ -2.11
E4F1Q66K89 RNU6-1237P-201ENST00000384777 107 ntBASIC1.87□□□□□ -2.11
E4F1Q66K89 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.87□□□□□ -2.11
E4F1Q66K89 AL161722.3-201ENST00000605789 2983 ntBASIC1.86□□□□□ -2.11
E4F1Q66K89 Y_RNA.155-201ENST00000363632 101 ntBASIC1.86□□□□□ -2.11
E4F1Q66K89 MIR1912-201ENST00000410389 80 ntBASIC1.86□□□□□ -2.11
E4F1Q66K89 AL445685.2-201ENST00000422551 342 ntBASIC1.86□□□□□ -2.11
E4F1Q66K89 RPL31P63-201ENST00000422565 375 ntBASIC1.86□□□□□ -2.11
E4F1Q66K89 RNA5SP445-201ENST00000515889 115 ntBASIC1.86□□□□□ -2.11
E4F1Q66K89 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.86□□□□□ -2.11
E4F1Q66K89 RNU6-94P-201ENST00000607728 107 ntBASIC1.86□□□□□ -2.11
E4F1Q66K89 MIR302D-201ENST00000362275 68 ntBASIC1.85□□□□□ -2.11
E4F1Q66K89 SNORD115-19-201ENST00000363098 82 ntBASIC1.85□□□□□ -2.11
E4F1Q66K89 SNORD115-18-201ENST00000363293 82 ntBASIC1.85□□□□□ -2.11
E4F1Q66K89 SNORD115-17-201ENST00000364612 82 ntBASIC1.85□□□□□ -2.11
E4F1Q66K89 RNU6-32P-201ENST00000383948 107 ntBASIC1.85□□□□□ -2.11
E4F1Q66K89 RNU6-13P-201ENST00000384248 107 ntBASIC1.85□□□□□ -2.11
E4F1Q66K89 RNU6-616P-201ENST00000384353 107 ntBASIC1.85□□□□□ -2.11
E4F1Q66K89 RNU6-1065P-201ENST00000384513 106 ntBASIC1.85□□□□□ -2.11
E4F1Q66K89 RNU6-12P-201ENST00000384604 107 ntBASIC1.85□□□□□ -2.11
E4F1Q66K89 RNU6-41P-201ENST00000384741 107 ntBASIC1.85□□□□□ -2.11
E4F1Q66K89 MIR1270-201ENST00000459320 83 ntBASIC1.85□□□□□ -2.11
E4F1Q66K89 RNU1-41P-201ENST00000516161 162 ntBASIC1.85□□□□□ -2.11
E4F1Q66K89 RNU6-168P-201ENST00000516189 101 ntBASIC1.85□□□□□ -2.11
E4F1Q66K89 RNU1-48P-201ENST00000516400 162 ntBASIC1.85□□□□□ -2.11
E4F1Q66K89 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.85□□□□□ -2.11
E4F1Q66K89 AC141557.1-201ENST00000540982 400 ntBASIC1.85□□□□□ -2.11
E4F1Q66K89 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.85□□□□□ -2.11
E4F1Q66K89 Y_RNA.495-201ENST00000384435 112 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 309.7 ms