Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 MIR3144-201ENST00000579460 79 ntBASIC1.1□□□□□ -2.23
RUNDC3AQ59EK9 HSPE1P19-201ENST00000603327 295 ntBASIC1.1□□□□□ -2.23
RUNDC3AQ59EK9 AP000753.3-201ENST00000604083 169 ntBASIC1.1□□□□□ -2.23
RUNDC3AQ59EK9 RNU6-94P-201ENST00000607728 107 ntBASIC1.1□□□□□ -2.23
RUNDC3AQ59EK9 AL353770.2-201ENST00000620024 78 ntBASIC1.1□□□□□ -2.23
RUNDC3AQ59EK9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
RUNDC3AQ59EK9 RNU6-151P-201ENST00000364158 107 ntBASIC1.09□□□□□ -2.23
RUNDC3AQ59EK9 Y_RNA.251-201ENST00000364551 99 ntBASIC1.09□□□□□ -2.23
RUNDC3AQ59EK9 SNORD113.3-201ENST00000364630 78 ntBASIC1.09□□□□□ -2.23
RUNDC3AQ59EK9 RNU6-580P-201ENST00000365159 107 ntBASIC1.09□□□□□ -2.23
RUNDC3AQ59EK9 RNU6-449P-201ENST00000383914 107 ntBASIC1.09□□□□□ -2.23
RUNDC3AQ59EK9 SNORD38B-201ENST00000384690 67 ntBASIC1.09□□□□□ -2.23
RUNDC3AQ59EK9 RNU6-1319P-201ENST00000390855 104 ntBASIC1.09□□□□□ -2.23
RUNDC3AQ59EK9 RNU6-747P-201ENST00000390928 104 ntBASIC1.09□□□□□ -2.23
RUNDC3AQ59EK9 RNU6-241P-201ENST00000391148 104 ntBASIC1.09□□□□□ -2.23
RUNDC3AQ59EK9 RNU6-177P-201ENST00000411257 104 ntBASIC1.09□□□□□ -2.23
RUNDC3AQ59EK9 Y_RNA.778-201ENST00000620203 90 ntBASIC1.09□□□□□ -2.23
RUNDC3AQ59EK9 AC021613.1-201ENST00000623880 111 ntBASIC1.09□□□□□ -2.23
RUNDC3AQ59EK9 SNORD38B-202ENST00000625943 69 ntBASIC1.09□□□□□ -2.23
RUNDC3AQ59EK9 Y_RNA.8-201ENST00000362353 102 ntBASIC1.08□□□□□ -2.24
RUNDC3AQ59EK9 Y_RNA.180-201ENST00000363867 113 ntBASIC1.08□□□□□ -2.24
RUNDC3AQ59EK9 RNU4-16P-201ENST00000364737 141 ntBASIC1.08□□□□□ -2.24
RUNDC3AQ59EK9 Y_RNA.398-201ENST00000383952 99 ntBASIC1.08□□□□□ -2.24
RUNDC3AQ59EK9 SNORD111-201ENST00000408139 94 ntBASIC1.08□□□□□ -2.24
RUNDC3AQ59EK9 RPS3AP1-201ENST00000413190 320 ntBASIC1.08□□□□□ -2.24
RUNDC3AQ59EK9 AC112693.2-201ENST00000556538 232 ntBASIC1.08□□□□□ -2.24
RUNDC3AQ59EK9 snoU13.31-201ENST00000607291 104 ntBASIC1.08□□□□□ -2.24
RUNDC3AQ59EK9 MIR6740-201ENST00000618268 113 ntBASIC1.08□□□□□ -2.24
RUNDC3AQ59EK9 AC091895.1-201ENST00000624494 256 ntBASIC1.08□□□□□ -2.24
RUNDC3AQ59EK9 MIR6841-201ENST00000637129 72 ntBASIC1.08□□□□□ -2.24
RUNDC3AQ59EK9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
RUNDC3AQ59EK9 Y_RNA.430-201ENST00000384081 110 ntBASIC1.07□□□□□ -2.24
RUNDC3AQ59EK9 RNA5SP261-201ENST00000410536 106 ntBASIC1.07□□□□□ -2.24
RUNDC3AQ59EK9 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
RUNDC3AQ59EK9 RNU7-197P-201ENST00000458836 62 ntBASIC1.07□□□□□ -2.24
RUNDC3AQ59EK9 MTND5P41-201ENST00000517498 206 ntBASIC1.07□□□□□ -2.24
RUNDC3AQ59EK9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.07□□□□□ -2.24
RUNDC3AQ59EK9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.07□□□□□ -2.24
RUNDC3AQ59EK9 uc_338.6-201ENST00000613544 171 ntBASIC1.07□□□□□ -2.24
RUNDC3AQ59EK9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
RUNDC3AQ59EK9 RNU6-349P-201ENST00000362402 107 ntBASIC1.06□□□□□ -2.24
RUNDC3AQ59EK9 Y_RNA.327-201ENST00000365201 102 ntBASIC1.06□□□□□ -2.24
RUNDC3AQ59EK9 RNY1P6-201ENST00000384193 109 ntBASIC1.06□□□□□ -2.24
RUNDC3AQ59EK9 MIR200A-201ENST00000384875 90 ntBASIC1.06□□□□□ -2.24
RUNDC3AQ59EK9 SNORD12C-201ENST00000386307 89 ntBASIC1.06□□□□□ -2.24
RUNDC3AQ59EK9 Y_RNA.584-201ENST00000391090 114 ntBASIC1.06□□□□□ -2.24
RUNDC3AQ59EK9 RNU7-62P-201ENST00000458856 62 ntBASIC1.06□□□□□ -2.24
RUNDC3AQ59EK9 snoU13.21-201ENST00000459368 105 ntBASIC1.06□□□□□ -2.24
RUNDC3AQ59EK9 AC021753.1-201ENST00000635724 168 ntBASIC1.06□□□□□ -2.24
RUNDC3AQ59EK9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
RUNDC3AQ59EK9 TRMT112P2-201ENST00000512910 132 ntBASIC1.05□□□□□ -2.24
RUNDC3AQ59EK9 RNU6-1053P-201ENST00000515930 101 ntBASIC1.05□□□□□ -2.24
RUNDC3AQ59EK9 Y_RNA.686-201ENST00000516548 134 ntBASIC1.05□□□□□ -2.24
RUNDC3AQ59EK9 MIR4498-201ENST00000577599 66 ntBASIC1.05□□□□□ -2.24
RUNDC3AQ59EK9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
RUNDC3AQ59EK9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
RUNDC3AQ59EK9 SNORA22.1-201ENST00000362701 134 ntBASIC1.04□□□□□ -2.24
RUNDC3AQ59EK9 RNU6-508P-201ENST00000363231 103 ntBASIC1.04□□□□□ -2.24
RUNDC3AQ59EK9 SNORD114-24-201ENST00000365029 72 ntBASIC1.04□□□□□ -2.24
RUNDC3AQ59EK9 Y_RNA.464-201ENST00000384282 110 ntBASIC1.04□□□□□ -2.24
RUNDC3AQ59EK9 SNORA20-201ENST00000384662 132 ntBASIC1.04□□□□□ -2.24
RUNDC3AQ59EK9 MIR942-201ENST00000401111 86 ntBASIC1.04□□□□□ -2.24
RUNDC3AQ59EK9 snoU13.2-201ENST00000459201 104 ntBASIC1.04□□□□□ -2.24
RUNDC3AQ59EK9 MIR3152-201ENST00000579801 74 ntBASIC1.04□□□□□ -2.24
RUNDC3AQ59EK9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
RUNDC3AQ59EK9 MIR6078-201ENST00000611069 100 ntBASIC1.04□□□□□ -2.24
RUNDC3AQ59EK9 AC012676.2-201ENST00000619258 186 ntBASIC1.04□□□□□ -2.24
RUNDC3AQ59EK9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.04□□□□□ -2.24
RUNDC3AQ59EK9 AL391516.1-201ENST00000554380 2449 ntBASIC1.04□□□□□ -2.24
RUNDC3AQ59EK9 Y_RNA.120-201ENST00000363304 110 ntBASIC1.03□□□□□ -2.24
RUNDC3AQ59EK9 Y_RNA.164-201ENST00000363709 102 ntBASIC1.03□□□□□ -2.24
RUNDC3AQ59EK9 MIR588-201ENST00000384900 83 ntBASIC1.03□□□□□ -2.24
RUNDC3AQ59EK9 MT-TR-201ENST00000387439 65 ntBASIC1.03□□□□□ -2.24
RUNDC3AQ59EK9 MIR548I1-201ENST00000408810 149 ntBASIC1.03□□□□□ -2.24
RUNDC3AQ59EK9 RNU6-994P-201ENST00000410507 111 ntBASIC1.03□□□□□ -2.24
RUNDC3AQ59EK9 POLR2J4-204ENST00000418424 324 ntBASIC1.03□□□□□ -2.24
RUNDC3AQ59EK9 MTATP6P21-201ENST00000440681 189 ntBASIC1.03□□□□□ -2.24
RUNDC3AQ59EK9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.03□□□□□ -2.24
RUNDC3AQ59EK9 Y_RNA.651-201ENST00000459380 103 ntBASIC1.03□□□□□ -2.24
RUNDC3AQ59EK9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.03□□□□□ -2.24
RUNDC3AQ59EK9 RNU6-1212P-201ENST00000517023 104 ntBASIC1.03□□□□□ -2.24
RUNDC3AQ59EK9 AL359821.1-201ENST00000605519 182 ntBASIC1.03□□□□□ -2.24
RUNDC3AQ59EK9 Y_RNA.354-201ENST00000365448 111 ntBASIC1.02□□□□□ -2.25
RUNDC3AQ59EK9 MIR563-201ENST00000385080 79 ntBASIC1.02□□□□□ -2.25
RUNDC3AQ59EK9 RNU6-460P-201ENST00000391158 108 ntBASIC1.02□□□□□ -2.25
RUNDC3AQ59EK9 SNORA25.12-201ENST00000516202 82 ntBASIC1.02□□□□□ -2.25
RUNDC3AQ59EK9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.02□□□□□ -2.25
RUNDC3AQ59EK9 AC010332.2-201ENST00000613083 1904 ntBASIC1.01□□□□□ -2.25
RUNDC3AQ59EK9 RNU6-369P-201ENST00000362515 102 ntBASIC1.01□□□□□ -2.25
RUNDC3AQ59EK9 Y_RNA.170-201ENST00000363746 110 ntBASIC1.01□□□□□ -2.25
RUNDC3AQ59EK9 Y_RNA.400-201ENST00000383963 111 ntBASIC1.01□□□□□ -2.25
RUNDC3AQ59EK9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.01□□□□□ -2.25
RUNDC3AQ59EK9 RNU6-1165P-201ENST00000410119 107 ntBASIC1.01□□□□□ -2.25
RUNDC3AQ59EK9 RNA5SP144-201ENST00000410846 116 ntBASIC1.01□□□□□ -2.25
RUNDC3AQ59EK9 SNORD83.1-201ENST00000411362 77 ntBASIC1.01□□□□□ -2.25
RUNDC3AQ59EK9 FABP5P4-201ENST00000437203 171 ntBASIC1.01□□□□□ -2.25
RUNDC3AQ59EK9 RNU6-1258P-201ENST00000516911 111 ntBASIC1.01□□□□□ -2.25
RUNDC3AQ59EK9 RNU6-255P-201ENST00000516957 105 ntBASIC1.01□□□□□ -2.25
RUNDC3AQ59EK9 MIR4295-201ENST00000585286 85 ntBASIC1.01□□□□□ -2.25
RUNDC3AQ59EK9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms