Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.76□□□□□ -2.13
SF3B3Q15393 AL353770.2-201ENST00000620024 78 ntBASIC1.76□□□□□ -2.13
SF3B3Q15393 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.75□□□□□ -2.13
SF3B3Q15393 MIR342-201ENST00000362212 99 ntBASIC1.75□□□□□ -2.13
SF3B3Q15393 SNORA24-201ENST00000384096 131 ntBASIC1.75□□□□□ -2.13
SF3B3Q15393 Y_RNA.528-201ENST00000384575 108 ntBASIC1.75□□□□□ -2.13
SF3B3Q15393 SNX2P2-201ENST00000424553 323 ntBASIC1.75□□□□□ -2.13
SF3B3Q15393 JTBP1-201ENST00000441314 247 ntBASIC1.75□□□□□ -2.13
SF3B3Q15393 AC107297.1-201ENST00000459991 176 ntBASIC1.75□□□□□ -2.13
SF3B3Q15393 RNU6-589P-201ENST00000516485 107 ntBASIC1.75□□□□□ -2.13
SF3B3Q15393 RNU6-44P-201ENST00000384045 107 ntBASIC1.74□□□□□ -2.13
SF3B3Q15393 RNU6-439P-201ENST00000384188 106 ntBASIC1.74□□□□□ -2.13
SF3B3Q15393 MIR548A3-201ENST00000385297 97 ntBASIC1.74□□□□□ -2.13
SF3B3Q15393 RNY4P18-201ENST00000391107 89 ntBASIC1.74□□□□□ -2.13
SF3B3Q15393 COX6CP6-201ENST00000490840 228 ntBASIC1.74□□□□□ -2.13
SF3B3Q15393 SNORA74.3-201ENST00000517108 154 ntBASIC1.74□□□□□ -2.13
SF3B3Q15393 SUMO2P16-201ENST00000519475 264 ntBASIC1.74□□□□□ -2.13
SF3B3Q15393 HSPE1P19-201ENST00000603327 295 ntBASIC1.74□□□□□ -2.13
SF3B3Q15393 AL157834.3-201ENST00000615543 103 ntBASIC1.74□□□□□ -2.13
SF3B3Q15393 RNU6-414P-201ENST00000363705 104 ntBASIC1.73□□□□□ -2.13
SF3B3Q15393 RNU6-53P-201ENST00000365367 106 ntBASIC1.73□□□□□ -2.13
SF3B3Q15393 MIR653-201ENST00000385279 96 ntBASIC1.73□□□□□ -2.13
SF3B3Q15393 MIR320A-201ENST00000385302 82 ntBASIC1.73□□□□□ -2.13
SF3B3Q15393 AL035398.1-201ENST00000430869 322 ntBASIC1.73□□□□□ -2.13
SF3B3Q15393 RPS29P29-201ENST00000456396 171 ntBASIC1.73□□□□□ -2.13
SF3B3Q15393 Y_RNA.649-201ENST00000459077 103 ntBASIC1.73□□□□□ -2.13
SF3B3Q15393 RNU2-11P-201ENST00000459191 187 ntBASIC1.73□□□□□ -2.13
SF3B3Q15393 RNY4P20-201ENST00000516678 93 ntBASIC1.73□□□□□ -2.13
SF3B3Q15393 Y_RNA.709-201ENST00000516952 92 ntBASIC1.73□□□□□ -2.13
SF3B3Q15393 AC021443.1-201ENST00000604478 211 ntBASIC1.73□□□□□ -2.13
SF3B3Q15393 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.73□□□□□ -2.13
SF3B3Q15393 AL121890.5-201ENST00000620848 304 ntBASIC1.73□□□□□ -2.13
SF3B3Q15393 AC106754.2-201ENST00000623006 233 ntBASIC1.73□□□□□ -2.13
SF3B3Q15393 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SF3B3Q15393 RNA5SP363-201ENST00000365072 115 ntBASIC1.72□□□□□ -2.13
SF3B3Q15393 SNORA70.7-201ENST00000384159 133 ntBASIC1.72□□□□□ -2.13
SF3B3Q15393 RNU1-123P-201ENST00000458950 160 ntBASIC1.72□□□□□ -2.13
SF3B3Q15393 MIR4305-201ENST00000583252 102 ntBASIC1.72□□□□□ -2.13
SF3B3Q15393 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.72□□□□□ -2.13
SF3B3Q15393 AL391516.1-201ENST00000554380 2449 ntBASIC1.72□□□□□ -2.13
SF3B3Q15393 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
SF3B3Q15393 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SF3B3Q15393 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
SF3B3Q15393 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SF3B3Q15393 MIR302B-201ENST00000362188 73 ntBASIC1.71□□□□□ -2.14
SF3B3Q15393 Y_RNA.298-201ENST00000364960 107 ntBASIC1.71□□□□□ -2.14
SF3B3Q15393 SNORD116-21-201ENST00000384507 92 ntBASIC1.71□□□□□ -2.14
SF3B3Q15393 Y_RNA.537-201ENST00000384626 109 ntBASIC1.71□□□□□ -2.14
SF3B3Q15393 MIR570-201ENST00000384917 97 ntBASIC1.71□□□□□ -2.14
SF3B3Q15393 MIR548A1-201ENST00000385041 97 ntBASIC1.71□□□□□ -2.14
SF3B3Q15393 SNORA77B-201ENST00000578179 125 ntBASIC1.71□□□□□ -2.14
SF3B3Q15393 MIR4791-201ENST00000607666 84 ntBASIC1.71□□□□□ -2.14
SF3B3Q15393 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.71□□□□□ -2.14
SF3B3Q15393 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.71□□□□□ -2.14
SF3B3Q15393 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SF3B3Q15393 AP000648.3-201ENST00000623539 4507 ntBASIC1.71□□□□□ -2.14
SF3B3Q15393 Y_RNA.35-201ENST00000362601 101 ntBASIC1.7□□□□□ -2.14
SF3B3Q15393 Y_RNA.198-201ENST00000364013 98 ntBASIC1.7□□□□□ -2.14
SF3B3Q15393 RNU4-16P-201ENST00000364737 141 ntBASIC1.7□□□□□ -2.14
SF3B3Q15393 MIR513A1-201ENST00000385138 129 ntBASIC1.7□□□□□ -2.14
SF3B3Q15393 AC063976.4-201ENST00000421971 163 ntBASIC1.7□□□□□ -2.14
SF3B3Q15393 RNU7-73P-201ENST00000458743 63 ntBASIC1.7□□□□□ -2.14
SF3B3Q15393 RNU7-67P-201ENST00000459003 62 ntBASIC1.7□□□□□ -2.14
SF3B3Q15393 RNU7-164P-201ENST00000459221 62 ntBASIC1.7□□□□□ -2.14
SF3B3Q15393 RNU7-123P-201ENST00000515911 60 ntBASIC1.7□□□□□ -2.14
SF3B3Q15393 RNU2-35P-201ENST00000516446 142 ntBASIC1.7□□□□□ -2.14
SF3B3Q15393 RNU7-53P-201ENST00000516705 60 ntBASIC1.7□□□□□ -2.14
SF3B3Q15393 RNU6-958P-201ENST00000516995 106 ntBASIC1.7□□□□□ -2.14
SF3B3Q15393 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.7□□□□□ -2.14
SF3B3Q15393 MIR3660-201ENST00000584845 100 ntBASIC1.7□□□□□ -2.14
SF3B3Q15393 MIR6504-201ENST00000613520 61 ntBASIC1.7□□□□□ -2.14
SF3B3Q15393 AC243994.1-201ENST00000618627 109 ntBASIC1.7□□□□□ -2.14
SF3B3Q15393 AC021613.1-201ENST00000623880 111 ntBASIC1.7□□□□□ -2.14
SF3B3Q15393 RNU6-1319P-201ENST00000390855 104 ntBASIC1.69□□□□□ -2.14
SF3B3Q15393 RNU6-747P-201ENST00000390928 104 ntBASIC1.69□□□□□ -2.14
SF3B3Q15393 RNU6-241P-201ENST00000391148 104 ntBASIC1.69□□□□□ -2.14
SF3B3Q15393 RNA5SP144-201ENST00000410846 116 ntBASIC1.69□□□□□ -2.14
SF3B3Q15393 RNU6-177P-201ENST00000411257 104 ntBASIC1.69□□□□□ -2.14
SF3B3Q15393 AC023790.1-201ENST00000482174 347 ntBASIC1.69□□□□□ -2.14
SF3B3Q15393 RNU7-43P-201ENST00000516554 64 ntBASIC1.69□□□□□ -2.14
SF3B3Q15393 AC015688.6-201ENST00000577737 104 ntBASIC1.69□□□□□ -2.14
SF3B3Q15393 MIR8074-201ENST00000615081 81 ntBASIC1.69□□□□□ -2.14
SF3B3Q15393 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.69□□□□□ -2.14
SF3B3Q15393 RNU6-880P-201ENST00000384526 107 ntBASIC1.68□□□□□ -2.14
SF3B3Q15393 RNU6-1067P-201ENST00000384752 107 ntBASIC1.68□□□□□ -2.14
SF3B3Q15393 MT-TI-201ENST00000387365 69 ntBASIC1.68□□□□□ -2.14
SF3B3Q15393 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.68□□□□□ -2.14
SF3B3Q15393 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SF3B3Q15393 RNU6-913P-201ENST00000390913 95 ntBASIC1.68□□□□□ -2.14
SF3B3Q15393 SNORA26.6-201ENST00000391256 115 ntBASIC1.68□□□□□ -2.14
SF3B3Q15393 POLR2J4-204ENST00000418424 324 ntBASIC1.68□□□□□ -2.14
SF3B3Q15393 RNU7-45P-201ENST00000459460 63 ntBASIC1.68□□□□□ -2.14
SF3B3Q15393 AC005908.1-201ENST00000468701 347 ntBASIC1.68□□□□□ -2.14
SF3B3Q15393 MIR4764-201ENST00000580680 88 ntBASIC1.68□□□□□ -2.14
SF3B3Q15393 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.68□□□□□ -2.14
SF3B3Q15393 RNU6-755P-201ENST00000364400 103 ntBASIC1.67□□□□□ -2.14
SF3B3Q15393 RNA5SP259-201ENST00000365541 109 ntBASIC1.67□□□□□ -2.14
SF3B3Q15393 RNU6-1104P-201ENST00000384723 104 ntBASIC1.67□□□□□ -2.14
SF3B3Q15393 AC004223.1-201ENST00000479840 271 ntBASIC1.67□□□□□ -2.14
SF3B3Q15393 AC007012.1-201ENST00000567192 175 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms