Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC055731.1-201ENST00000474387 401 ntBASIC2.34□□□□□ -2.03
PCDH1Q08174 AC108729.3-201ENST00000513484 108 ntBASIC2.34□□□□□ -2.03
PCDH1Q08174 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.34□□□□□ -2.03
PCDH1Q08174 RNU6-162P-201ENST00000516228 103 ntBASIC2.34□□□□□ -2.03
PCDH1Q08174 AC121758.2-201ENST00000553271 193 ntBASIC2.34□□□□□ -2.03
PCDH1Q08174 CYP3A52P-201ENST00000563326 91 ntBASIC2.34□□□□□ -2.03
PCDH1Q08174 AC245884.12-201ENST00000615364 59 ntBASIC2.34□□□□□ -2.03
PCDH1Q08174 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PCDH1Q08174 AC131280.1-202ENST00000624067 4211 ntBASIC2.33□□□□□ -2.04
PCDH1Q08174 MIR21-201ENST00000362134 72 ntBASIC2.33□□□□□ -2.04
PCDH1Q08174 RNA5SP148-201ENST00000516527 94 ntBASIC2.33□□□□□ -2.04
PCDH1Q08174 MIR4251-201ENST00000635819 61 ntBASIC2.33□□□□□ -2.04
PCDH1Q08174 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
PCDH1Q08174 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.33□□□□□ -2.04
PCDH1Q08174 RNA5SP173-201ENST00000364857 136 ntBASIC2.32□□□□□ -2.04
PCDH1Q08174 MIR206-201ENST00000384872 86 ntBASIC2.32□□□□□ -2.04
PCDH1Q08174 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.32□□□□□ -2.04
PCDH1Q08174 MIR548AO-201ENST00000579992 96 ntBASIC2.32□□□□□ -2.04
PCDH1Q08174 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.32□□□□□ -2.04
PCDH1Q08174 MIR494-201ENST00000349529 81 ntBASIC2.31□□□□□ -2.04
PCDH1Q08174 SNORD23.1-201ENST00000408212 104 ntBASIC2.31□□□□□ -2.04
PCDH1Q08174 AL161935.2-201ENST00000414627 60 ntBASIC2.31□□□□□ -2.04
PCDH1Q08174 AL513328.1-201ENST00000446460 224 ntBASIC2.31□□□□□ -2.04
PCDH1Q08174 AC008413.1-201ENST00000511864 177 ntBASIC2.31□□□□□ -2.04
PCDH1Q08174 Y_RNA.705-201ENST00000516862 110 ntBASIC2.31□□□□□ -2.04
PCDH1Q08174 AC022254.1-201ENST00000567857 235 ntBASIC2.31□□□□□ -2.04
PCDH1Q08174 MIR5007-201ENST00000583098 95 ntBASIC2.31□□□□□ -2.04
PCDH1Q08174 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PCDH1Q08174 SNORA67.4-201ENST00000384688 142 ntBASIC2.3□□□□□ -2.04
PCDH1Q08174 AL451046.2-201ENST00000403074 277 ntBASIC2.3□□□□□ -2.04
PCDH1Q08174 Y_RNA.593-201ENST00000410292 98 ntBASIC2.3□□□□□ -2.04
PCDH1Q08174 RNU6-1086P-201ENST00000410930 100 ntBASIC2.3□□□□□ -2.04
PCDH1Q08174 BTF3P4-201ENST00000418852 495 ntBASIC2.3□□□□□ -2.04
PCDH1Q08174 RNU7-41P-201ENST00000515917 61 ntBASIC2.3□□□□□ -2.04
PCDH1Q08174 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.3□□□□□ -2.04
PCDH1Q08174 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.3□□□□□ -2.04
PCDH1Q08174 MIR3945-201ENST00000581853 98 ntBASIC2.3□□□□□ -2.04
PCDH1Q08174 MIR4439-201ENST00000583746 80 ntBASIC2.3□□□□□ -2.04
PCDH1Q08174 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.3□□□□□ -2.04
PCDH1Q08174 Y_RNA.17-201ENST00000362433 111 ntBASIC2.29□□□□□ -2.04
PCDH1Q08174 RNA5SP432-201ENST00000362480 116 ntBASIC2.29□□□□□ -2.04
PCDH1Q08174 RNA5SP276-201ENST00000362580 94 ntBASIC2.29□□□□□ -2.04
PCDH1Q08174 RNY1P10-201ENST00000363268 113 ntBASIC2.29□□□□□ -2.04
PCDH1Q08174 RNA5SP259-201ENST00000365541 109 ntBASIC2.29□□□□□ -2.04
PCDH1Q08174 Y_RNA.467-201ENST00000384297 102 ntBASIC2.29□□□□□ -2.04
PCDH1Q08174 MIR513A1-201ENST00000385138 129 ntBASIC2.29□□□□□ -2.04
PCDH1Q08174 RNU6-1307P-201ENST00000391012 103 ntBASIC2.29□□□□□ -2.04
PCDH1Q08174 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.29□□□□□ -2.04
PCDH1Q08174 AC090844.1-201ENST00000422019 156 ntBASIC2.29□□□□□ -2.04
PCDH1Q08174 JTBP1-201ENST00000441314 247 ntBASIC2.29□□□□□ -2.04
PCDH1Q08174 UBL5P1-201ENST00000507979 193 ntBASIC2.29□□□□□ -2.04
PCDH1Q08174 AC026436.1-201ENST00000510537 270 ntBASIC2.29□□□□□ -2.04
PCDH1Q08174 RNU7-79P-201ENST00000516082 62 ntBASIC2.29□□□□□ -2.04
PCDH1Q08174 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.29□□□□□ -2.04
PCDH1Q08174 MIR3935-201ENST00000583472 104 ntBASIC2.29□□□□□ -2.04
PCDH1Q08174 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.29□□□□□ -2.04
PCDH1Q08174 MIR376B-201ENST00000614515 100 ntBASIC2.29□□□□□ -2.04
PCDH1Q08174 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
PCDH1Q08174 RNU6-972P-201ENST00000391208 107 ntBASIC2.28□□□□□ -2.04
PCDH1Q08174 RNA5SP212-201ENST00000391223 107 ntBASIC2.28□□□□□ -2.04
PCDH1Q08174 RNU6-887P-201ENST00000410660 100 ntBASIC2.28□□□□□ -2.04
PCDH1Q08174 SNORD67.1-201ENST00000516618 108 ntBASIC2.28□□□□□ -2.04
PCDH1Q08174 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.28□□□□□ -2.04
PCDH1Q08174 SNORD114-30-201ENST00000364448 72 ntBASIC2.27□□□□□ -2.05
PCDH1Q08174 Y_RNA.247-201ENST00000364500 92 ntBASIC2.27□□□□□ -2.05
PCDH1Q08174 RNU6-1152P-201ENST00000384576 107 ntBASIC2.27□□□□□ -2.05
PCDH1Q08174 SNORD38B-201ENST00000384690 67 ntBASIC2.27□□□□□ -2.05
PCDH1Q08174 RNU2-40P-201ENST00000410833 196 ntBASIC2.27□□□□□ -2.05
PCDH1Q08174 RPL31P63-201ENST00000422565 375 ntBASIC2.27□□□□□ -2.05
PCDH1Q08174 SNORD111.1-201ENST00000516421 86 ntBASIC2.27□□□□□ -2.05
PCDH1Q08174 RNU6-1006P-201ENST00000516998 103 ntBASIC2.27□□□□□ -2.05
PCDH1Q08174 MIR5694-201ENST00000581190 76 ntBASIC2.27□□□□□ -2.05
PCDH1Q08174 SNORD38B-202ENST00000625943 69 ntBASIC2.27□□□□□ -2.05
PCDH1Q08174 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PCDH1Q08174 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PCDH1Q08174 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
PCDH1Q08174 Y_RNA.140-201ENST00000363474 103 ntBASIC2.26□□□□□ -2.05
PCDH1Q08174 SNORD38.1-201ENST00000363863 68 ntBASIC2.26□□□□□ -2.05
PCDH1Q08174 SNORA6-201ENST00000384033 151 ntBASIC2.26□□□□□ -2.05
PCDH1Q08174 Y_RNA.448-201ENST00000384185 108 ntBASIC2.26□□□□□ -2.05
PCDH1Q08174 AC019129.1-201ENST00000403786 261 ntBASIC2.26□□□□□ -2.05
PCDH1Q08174 RNU6-592P-201ENST00000411333 103 ntBASIC2.26□□□□□ -2.05
PCDH1Q08174 AC109327.2-201ENST00000448339 378 ntBASIC2.26□□□□□ -2.05
PCDH1Q08174 AC009474.2-201ENST00000451383 136 ntBASIC2.26□□□□□ -2.05
PCDH1Q08174 RNA5SP24-201ENST00000516478 95 ntBASIC2.26□□□□□ -2.05
PCDH1Q08174 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
PCDH1Q08174 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.26□□□□□ -2.05
PCDH1Q08174 SNORD114-10-201ENST00000363409 72 ntBASIC2.25□□□□□ -2.05
PCDH1Q08174 RNA5SP48-201ENST00000363969 126 ntBASIC2.25□□□□□ -2.05
PCDH1Q08174 RNU6-865P-201ENST00000364772 107 ntBASIC2.25□□□□□ -2.05
PCDH1Q08174 RNU6-573P-201ENST00000383938 106 ntBASIC2.25□□□□□ -2.05
PCDH1Q08174 RNU6-439P-201ENST00000384188 106 ntBASIC2.25□□□□□ -2.05
PCDH1Q08174 MIR34C-201ENST00000384831 77 ntBASIC2.25□□□□□ -2.05
PCDH1Q08174 RPS29P28-201ENST00000446439 141 ntBASIC2.25□□□□□ -2.05
PCDH1Q08174 RNU7-137P-201ENST00000516788 62 ntBASIC2.25□□□□□ -2.05
PCDH1Q08174 AP003327.1-201ENST00000529684 127 ntBASIC2.25□□□□□ -2.05
PCDH1Q08174 MIR6840-201ENST00000611937 71 ntBASIC2.25□□□□□ -2.05
PCDH1Q08174 MIR1245B-201ENST00000636115 69 ntBASIC2.25□□□□□ -2.05
PCDH1Q08174 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
PCDH1Q08174 Y_RNA.190-201ENST00000363964 101 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms