Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC098479.1-201ENST00000609225 154 ntBASIC-1.91□□□□□ -2.72
HIST1H1AQ02539 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.92□□□□□ -2.72
HIST1H1AQ02539 RNU4-70P-201ENST00000384579 139 ntBASIC-1.92□□□□□ -2.72
HIST1H1AQ02539 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-1.92□□□□□ -2.72
HIST1H1AQ02539 MTND2P22-201ENST00000444325 1033 ntBASIC-1.92□□□□□ -2.72
HIST1H1AQ02539 RNU7-66P-201ENST00000459469 62 ntBASIC-1.92□□□□□ -2.72
HIST1H1AQ02539 SNORD77.4-201ENST00000516158 81 ntBASIC-1.92□□□□□ -2.72
HIST1H1AQ02539 MIR6854-201ENST00000614935 69 ntBASIC-1.92□□□□□ -2.72
HIST1H1AQ02539 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.93□□□□□ -2.72
HIST1H1AQ02539 SNORD115-35-201ENST00000365122 82 ntBASIC-1.93□□□□□ -2.72
HIST1H1AQ02539 AC016907.1-201ENST00000419483 435 ntBASIC-1.93□□□□□ -2.72
HIST1H1AQ02539 MTND1P2-201ENST00000430604 821 ntBASIC-1.93□□□□□ -2.72
HIST1H1AQ02539 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.93□□□□□ -2.72
HIST1H1AQ02539 RNU7-80P-201ENST00000459562 61 ntBASIC-1.93□□□□□ -2.72
HIST1H1AQ02539 RNU7-35P-201ENST00000517174 62 ntBASIC-1.93□□□□□ -2.72
HIST1H1AQ02539 RN7SKP295-201ENST00000517264 153 ntBASIC-1.93□□□□□ -2.72
HIST1H1AQ02539 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.93□□□□□ -2.72
HIST1H1AQ02539 AC011476.5-201ENST00000615594 130 ntBASIC-1.93□□□□□ -2.72
HIST1H1AQ02539 AC112487.2-201ENST00000637950 304 ntBASIC-1.93□□□□□ -2.72
HIST1H1AQ02539 RNU4-80P-201ENST00000363200 141 ntBASIC-1.94□□□□□ -2.72
HIST1H1AQ02539 RNU6-835P-201ENST00000516974 104 ntBASIC-1.94□□□□□ -2.72
HIST1H1AQ02539 RNU6-365P-201ENST00000517113 106 ntBASIC-1.94□□□□□ -2.72
HIST1H1AQ02539 AC091932.4-201ENST00000623386 200 ntBASIC-1.94□□□□□ -2.72
HIST1H1AQ02539 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.95□□□□□ -2.72
HIST1H1AQ02539 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.95□□□□□ -2.72
HIST1H1AQ02539 Y_RNA.169-201ENST00000363745 96 ntBASIC-1.95□□□□□ -2.72
HIST1H1AQ02539 SNORA72.4-201ENST00000384174 132 ntBASIC-1.95□□□□□ -2.72
HIST1H1AQ02539 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.95□□□□□ -2.72
HIST1H1AQ02539 SNORD5.1-201ENST00000458800 75 ntBASIC-1.95□□□□□ -2.72
HIST1H1AQ02539 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.95□□□□□ -2.72
HIST1H1AQ02539 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.95□□□□□ -2.72
HIST1H1AQ02539 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.95□□□□□ -2.72
HIST1H1AQ02539 AC138207.3-201ENST00000585289 166 ntBASIC-1.95□□□□□ -2.72
HIST1H1AQ02539 AL121655.1-201ENST00000605811 308 ntBASIC-1.95□□□□□ -2.72
HIST1H1AQ02539 AC021613.1-201ENST00000623880 111 ntBASIC-1.95□□□□□ -2.72
HIST1H1AQ02539 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.96□□□□□ -2.72
HIST1H1AQ02539 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.96□□□□□ -2.72
HIST1H1AQ02539 Y_RNA.530-201ENST00000384587 101 ntBASIC-1.96□□□□□ -2.72
HIST1H1AQ02539 MIR652-201ENST00000385278 98 ntBASIC-1.96□□□□□ -2.72
HIST1H1AQ02539 Y_RNA.615-201ENST00000410769 117 ntBASIC-1.96□□□□□ -2.72
HIST1H1AQ02539 HLA-S-202ENST00000425174 53 ntBASIC-1.96□□□□□ -2.72
HIST1H1AQ02539 MTND4P28-201ENST00000426217 387 ntBASIC-1.96□□□□□ -2.72
HIST1H1AQ02539 RNU6-126P-201ENST00000516685 103 ntBASIC-1.96□□□□□ -2.72
HIST1H1AQ02539 AC060788.1-201ENST00000521318 469 ntBASIC-1.96□□□□□ -2.72
HIST1H1AQ02539 MTATP6P24-201ENST00000576835 677 ntBASIC-1.96□□□□□ -2.72
HIST1H1AQ02539 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.96□□□□□ -2.72
HIST1H1AQ02539 MIR8068-201ENST00000618032 68 ntBASIC-1.96□□□□□ -2.72
HIST1H1AQ02539 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.97□□□□□ -2.72
HIST1H1AQ02539 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.97□□□□□ -2.72
HIST1H1AQ02539 MIR519A1-201ENST00000385257 85 ntBASIC-1.97□□□□□ -2.72
HIST1H1AQ02539 RNA5SP180-201ENST00000516181 101 ntBASIC-1.97□□□□□ -2.72
HIST1H1AQ02539 RNU1-54P-201ENST00000517181 120 ntBASIC-1.97□□□□□ -2.72
HIST1H1AQ02539 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.97□□□□□ -2.72
HIST1H1AQ02539 AC093783.1-201ENST00000612976 329 ntBASIC-1.97□□□□□ -2.72
HIST1H1AQ02539 AF246928.1-201ENST00000623768 87 ntBASIC-1.97□□□□□ -2.72
HIST1H1AQ02539 AC132825.6-201ENST00000638861 357 ntBASIC-1.97□□□□□ -2.72
HIST1H1AQ02539 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.98□□□□□ -2.73
HIST1H1AQ02539 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.98□□□□□ -2.73
HIST1H1AQ02539 SNORA40.4-201ENST00000390971 128 ntBASIC-1.98□□□□□ -2.73
HIST1H1AQ02539 SERF1AP1-201ENST00000514575 187 ntBASIC-1.98□□□□□ -2.73
HIST1H1AQ02539 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.98□□□□□ -2.73
HIST1H1AQ02539 MRPS36P3-201ENST00000519284 130 ntBASIC-1.98□□□□□ -2.73
HIST1H1AQ02539 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.98□□□□□ -2.73
HIST1H1AQ02539 RNU6-553P-201ENST00000364047 96 ntBASIC-1.99□□□□□ -2.73
HIST1H1AQ02539 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.99□□□□□ -2.73
HIST1H1AQ02539 RNU6-524P-201ENST00000384270 107 ntBASIC-1.99□□□□□ -2.73
HIST1H1AQ02539 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.99□□□□□ -2.73
HIST1H1AQ02539 MIR601-201ENST00000385256 79 ntBASIC-1.99□□□□□ -2.73
HIST1H1AQ02539 RNU7-195P-201ENST00000458793 62 ntBASIC-1.99□□□□□ -2.73
HIST1H1AQ02539 AC040904.1-201ENST00000590850 223 ntBASIC-1.99□□□□□ -2.73
HIST1H1AQ02539 U4.1-201ENST00000620349 87 ntBASIC-1.99□□□□□ -2.73
HIST1H1AQ02539 AC099654.14-201ENST00000638599 341 ntBASIC-1.99□□□□□ -2.73
HIST1H1AQ02539 SNORD81.1-201ENST00000363064 77 ntBASIC-2□□□□□ -2.73
HIST1H1AQ02539 RNU6-801P-201ENST00000364087 105 ntBASIC-2□□□□□ -2.73
HIST1H1AQ02539 RNU6-383P-201ENST00000410864 94 ntBASIC-2□□□□□ -2.73
HIST1H1AQ02539 RNU7-137P-201ENST00000516788 62 ntBASIC-2□□□□□ -2.73
HIST1H1AQ02539 AC024909.2-201ENST00000553035 286 ntBASIC-2□□□□□ -2.73
HIST1H1AQ02539 UBE2V2P2-201ENST00000587677 504 ntBASIC-2□□□□□ -2.73
HIST1H1AQ02539 DLEU2_5.2-201ENST00000610606 84 ntBASIC-2□□□□□ -2.73
HIST1H1AQ02539 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-2□□□□□ -2.73
HIST1H1AQ02539 RNU6-144P-201ENST00000383951 107 ntBASIC-2.01□□□□□ -2.73
HIST1H1AQ02539 RNU6-476P-201ENST00000384726 107 ntBASIC-2.01□□□□□ -2.73
HIST1H1AQ02539 Y_RNA.570-201ENST00000384750 101 ntBASIC-2.01□□□□□ -2.73
HIST1H1AQ02539 RNU6-1068P-201ENST00000410958 103 ntBASIC-2.01□□□□□ -2.73
HIST1H1AQ02539 RNU6-232P-201ENST00000517144 64 ntBASIC-2.01□□□□□ -2.73
HIST1H1AQ02539 MIR1244-1-201ENST00000612829 85 ntBASIC-2.01□□□□□ -2.73
HIST1H1AQ02539 MIR1244-3-201ENST00000635744 85 ntBASIC-2.01□□□□□ -2.73
HIST1H1AQ02539 MIR1244-2-201ENST00000636449 85 ntBASIC-2.01□□□□□ -2.73
HIST1H1AQ02539 MIR376A2-201ENST00000636782 80 ntBASIC-2.01□□□□□ -2.73
HIST1H1AQ02539 MIR1244-4-202ENST00000636813 85 ntBASIC-2.01□□□□□ -2.73
HIST1H1AQ02539 Y_RNA.66-201ENST00000362862 102 ntBASIC-2.02□□□□□ -2.73
HIST1H1AQ02539 RNU6-905P-201ENST00000384434 107 ntBASIC-2.02□□□□□ -2.73
HIST1H1AQ02539 RNU6-308P-201ENST00000390957 107 ntBASIC-2.02□□□□□ -2.73
HIST1H1AQ02539 SNORA53-201ENST00000391141 249 ntBASIC-2.02□□□□□ -2.73
HIST1H1AQ02539 MIR1285-2-201ENST00000408311 88 ntBASIC-2.02□□□□□ -2.73
HIST1H1AQ02539 AL353813.1-201ENST00000440700 253 ntBASIC-2.02□□□□□ -2.73
HIST1H1AQ02539 RNU6-893P-201ENST00000458841 100 ntBASIC-2.02□□□□□ -2.73
HIST1H1AQ02539 Y_RNA.700-201ENST00000516806 100 ntBASIC-2.02□□□□□ -2.73
HIST1H1AQ02539 RNU6-1258P-201ENST00000516911 111 ntBASIC-2.02□□□□□ -2.73
HIST1H1AQ02539 AC026421.1-201ENST00000519101 163 ntBASIC-2.02□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms