Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 SNORD115-32-201ENST00000364079 82 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 RNY1P13-201ENST00000365030 105 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 SNORD115-35-201ENST00000365122 82 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 MIR518F-201ENST00000384973 87 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
COL7A1Q02388 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 RNU6-192P-201ENST00000391253 100 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 RNU2-61P-201ENST00000411069 191 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 RNU2-55P-201ENST00000411146 174 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 AC093423.1-201ENST00000440817 142 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.25□□□□□ -2.45
COL7A1Q02388 RNU6-803P-201ENST00000516034 102 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 RNU6-531P-201ENST00000516694 104 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 MTCO2P4-201ENST00000517968 247 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 MIR2681-201ENST00000581814 105 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 AC124303.1-201ENST00000605703 360 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 AC098479.1-201ENST00000609225 154 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 AC145423.2-201ENST00000610631 239 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 U7.6-201ENST00000610841 64 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 AC011603.4-201ENST00000611325 277 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 MIR8068-201ENST00000618032 68 ntBASIC-0.25□□□□□ -2.45
COL7A1Q02388 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 RNU6-502P-201ENST00000362419 108 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 RNU6-431P-201ENST00000383874 107 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 SNORA18-201ENST00000384416 132 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 SNORA40.3-201ENST00000390964 122 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 RNU6-550P-201ENST00000391057 101 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 SNORA26.5-201ENST00000391215 123 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 MIR320B2-201ENST00000408479 138 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 RNA5SP237-201ENST00000410414 113 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 RNA5SP475-201ENST00000410568 110 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.26□□□□□ -2.45
COL7A1Q02388 RPS29P25-201ENST00000481709 171 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.26□□□□□ -2.45
COL7A1Q02388 YWHAEP2-201ENST00000580066 112 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 AC073648.5-201ENST00000603502 305 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 AC073534.2-201ENST00000620377 381 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.26□□□□□ -2.45
COL7A1Q02388 RNU6-208P-201ENST00000362431 107 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 RNU4-58P-201ENST00000363192 141 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 SNORA25.7-201ENST00000364375 127 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 RNU6-865P-201ENST00000364772 107 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 RNU6-728P-201ENST00000365375 104 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 RNU6-842P-201ENST00000384269 107 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 SNORD64-201ENST00000386683 67 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 RNU6-510P-201ENST00000391239 108 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 AL445193.1-201ENST00000441183 141 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 CHEK2P4-201ENST00000450340 246 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 RNU7-87P-201ENST00000459343 62 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 AC083798.1-201ENST00000472671 131 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 AC016550.1-201ENST00000505348 785 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 AC091144.1-201ENST00000519573 138 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 MIR4520-1-201ENST00000582609 70 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 MIR548AE1-201ENST00000583292 70 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 AC006006.1-201ENST00000603082 144 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 AL049861.1-201ENST00000603130 150 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 AC097639.2-201ENST00000603159 172 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 AL158063.1-201ENST00000615349 536 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 MIR548AY-201ENST00000617669 107 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 AL365265.1-201ENST00000621045 234 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 TPTEP1-208ENST00000636884 213 ntBASIC-0.26□□□□□ -2.45
COL7A1Q02388 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU4-92P-201ENST00000363783 136 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 SNORD115-28-201ENST00000363931 81 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU4-28P-201ENST00000364739 141 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-282P-201ENST00000365357 103 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 SNORA1-201ENST00000384107 130 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-281P-201ENST00000384212 103 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-95P-201ENST00000384697 107 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 MTATP6P26-201ENST00000445926 662 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 242.9 ms