Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 ACA64.5-201ENST00000516207 127 ntBASIC0.74□□□□□ -2.29
SRPXP78539 MIR4498-201ENST00000577599 66 ntBASIC0.74□□□□□ -2.29
SRPXP78539 AC012676.2-201ENST00000619258 186 ntBASIC0.74□□□□□ -2.29
SRPXP78539 AC023934.1-201ENST00000574529 2389 ntBASIC0.73□□□□□ -2.29
SRPXP78539 RNU4-16P-201ENST00000364737 141 ntBASIC0.73□□□□□ -2.29
SRPXP78539 FABP5P4-201ENST00000437203 171 ntBASIC0.73□□□□□ -2.29
SRPXP78539 AC074198.2-201ENST00000508153 258 ntBASIC0.73□□□□□ -2.29
SRPXP78539 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.73□□□□□ -2.29
SRPXP78539 AC090425.1-201ENST00000610007 140 ntBASIC0.73□□□□□ -2.29
SRPXP78539 MIR3658-201ENST00000636291 56 ntBASIC0.73□□□□□ -2.29
SRPXP78539 AC010332.2-201ENST00000613083 1904 ntBASIC0.73□□□□□ -2.29
SRPXP78539 Y_RNA.52-201ENST00000362760 96 ntBASIC0.72□□□□□ -2.29
SRPXP78539 RNY1P11-201ENST00000363759 113 ntBASIC0.72□□□□□ -2.29
SRPXP78539 RNU1-133P-201ENST00000364867 167 ntBASIC0.72□□□□□ -2.29
SRPXP78539 RNU6-392P-201ENST00000364926 101 ntBASIC0.72□□□□□ -2.29
SRPXP78539 Y_RNA.327-201ENST00000365201 102 ntBASIC0.72□□□□□ -2.29
SRPXP78539 MIR588-201ENST00000384900 83 ntBASIC0.72□□□□□ -2.29
SRPXP78539 RNU7-120P-201ENST00000459334 63 ntBASIC0.72□□□□□ -2.29
SRPXP78539 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.72□□□□□ -2.29
SRPXP78539 SNORA81.3-201ENST00000517283 198 ntBASIC0.72□□□□□ -2.29
SRPXP78539 MIR4661-201ENST00000582720 75 ntBASIC0.72□□□□□ -2.29
SRPXP78539 AL359821.1-201ENST00000605519 182 ntBASIC0.72□□□□□ -2.29
SRPXP78539 Y_RNA.29-201ENST00000362570 113 ntBASIC0.71□□□□□ -2.3
SRPXP78539 Y_RNA.240-201ENST00000364469 95 ntBASIC0.71□□□□□ -2.3
SRPXP78539 Y_RNA.454-201ENST00000384224 113 ntBASIC0.71□□□□□ -2.3
SRPXP78539 MIR146A-201ENST00000385201 99 ntBASIC0.71□□□□□ -2.3
SRPXP78539 MIR1827-201ENST00000408549 66 ntBASIC0.71□□□□□ -2.3
SRPXP78539 AC067940.1-201ENST00000458411 300 ntBASIC0.71□□□□□ -2.3
SRPXP78539 RNU7-70P-201ENST00000516941 66 ntBASIC0.71□□□□□ -2.3
SRPXP78539 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.71□□□□□ -2.3
SRPXP78539 MIR4771-2-201ENST00000577758 74 ntBASIC0.71□□□□□ -2.3
SRPXP78539 MIR4771-1-201ENST00000582617 74 ntBASIC0.71□□□□□ -2.3
SRPXP78539 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.71□□□□□ -2.3
SRPXP78539 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.71□□□□□ -2.3
SRPXP78539 AC004792.1-201ENST00000614523 137 ntBASIC0.71□□□□□ -2.3
SRPXP78539 RNA5SP432-201ENST00000362480 116 ntBASIC0.7□□□□□ -2.3
SRPXP78539 RNU4-84P-201ENST00000364200 139 ntBASIC0.7□□□□□ -2.3
SRPXP78539 RNU6-934P-201ENST00000365154 107 ntBASIC0.7□□□□□ -2.3
SRPXP78539 Y_RNA.337-201ENST00000365312 102 ntBASIC0.7□□□□□ -2.3
SRPXP78539 Y_RNA.357-201ENST00000365487 109 ntBASIC0.7□□□□□ -2.3
SRPXP78539 MIR532-201ENST00000385025 91 ntBASIC0.7□□□□□ -2.3
SRPXP78539 MIR100-201ENST00000385259 80 ntBASIC0.7□□□□□ -2.3
SRPXP78539 RNU6-239P-201ENST00000390990 99 ntBASIC0.7□□□□□ -2.3
SRPXP78539 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.7□□□□□ -2.3
SRPXP78539 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.7□□□□□ -2.3
SRPXP78539 RNU6-1165P-201ENST00000410119 107 ntBASIC0.7□□□□□ -2.3
SRPXP78539 RNU6-588P-201ENST00000410281 105 ntBASIC0.7□□□□□ -2.3
SRPXP78539 POLR2J4-204ENST00000418424 324 ntBASIC0.7□□□□□ -2.3
SRPXP78539 snoU13.2-201ENST00000459201 104 ntBASIC0.7□□□□□ -2.3
SRPXP78539 AC108729.3-201ENST00000513484 108 ntBASIC0.7□□□□□ -2.3
SRPXP78539 RNU6-351P-201ENST00000516097 100 ntBASIC0.7□□□□□ -2.3
SRPXP78539 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.7□□□□□ -2.3
SRPXP78539 AC021613.1-201ENST00000623880 111 ntBASIC0.7□□□□□ -2.3
SRPXP78539 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
SRPXP78539 RNU6-1319P-201ENST00000390855 104 ntBASIC0.69□□□□□ -2.3
SRPXP78539 RNU6-747P-201ENST00000390928 104 ntBASIC0.69□□□□□ -2.3
SRPXP78539 RNU6-241P-201ENST00000391148 104 ntBASIC0.69□□□□□ -2.3
SRPXP78539 SNORD99-201ENST00000408612 74 ntBASIC0.69□□□□□ -2.3
SRPXP78539 RNU6-177P-201ENST00000411257 104 ntBASIC0.69□□□□□ -2.3
SRPXP78539 RPS26P5-201ENST00000418544 335 ntBASIC0.69□□□□□ -2.3
SRPXP78539 U7.7-201ENST00000459276 60 ntBASIC0.69□□□□□ -2.3
SRPXP78539 RNU6-1110P-201ENST00000516462 101 ntBASIC0.69□□□□□ -2.3
SRPXP78539 AC020891.4-201ENST00000605745 93 ntBASIC0.69□□□□□ -2.3
SRPXP78539 MIR6841-201ENST00000637129 72 ntBASIC0.69□□□□□ -2.3
SRPXP78539 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.69□□□□□ -2.3
SRPXP78539 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.69□□□□□ -2.3
SRPXP78539 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.68□□□□□ -2.3
SRPXP78539 MIR1-1-201ENST00000362147 71 ntBASIC0.68□□□□□ -2.3
SRPXP78539 RNU6-818P-201ENST00000364837 108 ntBASIC0.68□□□□□ -2.3
SRPXP78539 RNU1-36P-201ENST00000365130 165 ntBASIC0.68□□□□□ -2.3
SRPXP78539 Y_RNA.785-201ENST00000384290 109 ntBASIC0.68□□□□□ -2.3
SRPXP78539 RNU6-1237P-201ENST00000384777 107 ntBASIC0.68□□□□□ -2.3
SRPXP78539 SNORA75.5-201ENST00000391291 81 ntBASIC0.68□□□□□ -2.3
SRPXP78539 AC113410.1-201ENST00000505029 247 ntBASIC0.68□□□□□ -2.3
SRPXP78539 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.68□□□□□ -2.3
SRPXP78539 Y_RNA.662-201ENST00000516028 97 ntBASIC0.68□□□□□ -2.3
SRPXP78539 RNA5SP236-201ENST00000516169 116 ntBASIC0.68□□□□□ -2.3
SRPXP78539 RNU7-121P-201ENST00000516604 62 ntBASIC0.68□□□□□ -2.3
SRPXP78539 MIR3124-201ENST00000582636 67 ntBASIC0.68□□□□□ -2.3
SRPXP78539 FAM71BP1-201ENST00000604431 523 ntBASIC0.68□□□□□ -2.3
SRPXP78539 AL353765.1-201ENST00000605514 183 ntBASIC0.68□□□□□ -2.3
SRPXP78539 MIR6857-201ENST00000613267 93 ntBASIC0.68□□□□□ -2.3
SRPXP78539 MIR6844-201ENST00000637122 62 ntBASIC0.68□□□□□ -2.3
SRPXP78539 MIR30D-201ENST00000362283 70 ntBASIC0.67□□□□□ -2.3
SRPXP78539 SNORA22.1-201ENST00000362701 134 ntBASIC0.67□□□□□ -2.3
SRPXP78539 RNU6-508P-201ENST00000363231 103 ntBASIC0.67□□□□□ -2.3
SRPXP78539 RNY1P10-201ENST00000363268 113 ntBASIC0.67□□□□□ -2.3
SRPXP78539 RNU6-53P-201ENST00000365367 106 ntBASIC0.67□□□□□ -2.3
SRPXP78539 RNU6-1318P-201ENST00000365389 103 ntBASIC0.67□□□□□ -2.3
SRPXP78539 Y_RNA.497-201ENST00000384447 98 ntBASIC0.67□□□□□ -2.3
SRPXP78539 MIR608-201ENST00000384820 100 ntBASIC0.67□□□□□ -2.3
SRPXP78539 MIR563-201ENST00000385080 79 ntBASIC0.67□□□□□ -2.3
SRPXP78539 RNU6-321P-201ENST00000410912 106 ntBASIC0.67□□□□□ -2.3
SRPXP78539 TRMT112P2-201ENST00000512910 132 ntBASIC0.67□□□□□ -2.3
SRPXP78539 Y_RNA.700-201ENST00000516806 100 ntBASIC0.67□□□□□ -2.3
SRPXP78539 RNU6-1258P-201ENST00000516911 111 ntBASIC0.67□□□□□ -2.3
SRPXP78539 RNU2-60P-201ENST00000517290 128 ntBASIC0.67□□□□□ -2.3
SRPXP78539 Y_RNA.338-201ENST00000365320 114 ntBASIC0.66□□□□□ -2.3
SRPXP78539 Y_RNA.430-201ENST00000384081 110 ntBASIC0.66□□□□□ -2.3
SRPXP78539 Y_RNA.441-201ENST00000384123 112 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 194.4 ms