Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 Y_RNA.634-201ENST00000364811 113 ntBASIC0.06□□□□□ -2.4
CCNA1P78396 RNU6-1189P-201ENST00000383958 107 ntBASIC0.06□□□□□ -2.4
CCNA1P78396 RNU6-484P-201ENST00000384016 107 ntBASIC0.06□□□□□ -2.4
CCNA1P78396 RNY3P14-201ENST00000384309 102 ntBASIC0.06□□□□□ -2.4
CCNA1P78396 SNORA8.3-201ENST00000384679 139 ntBASIC0.06□□□□□ -2.4
CCNA1P78396 MT-TD-201ENST00000387419 68 ntBASIC0.06□□□□□ -2.4
CCNA1P78396 SNORA26.6-201ENST00000391256 115 ntBASIC0.06□□□□□ -2.4
CCNA1P78396 RNA5SP237-201ENST00000410414 113 ntBASIC0.06□□□□□ -2.4
CCNA1P78396 ELOCP20-201ENST00000422460 345 ntBASIC0.06□□□□□ -2.4
CCNA1P78396 RNY3P15-201ENST00000516297 97 ntBASIC0.06□□□□□ -2.4
CCNA1P78396 SNORA27.4-201ENST00000516650 95 ntBASIC0.06□□□□□ -2.4
CCNA1P78396 MIR4801-201ENST00000582704 82 ntBASIC0.06□□□□□ -2.4
CCNA1P78396 AL662814.1-201ENST00000617364 121 ntBASIC0.06□□□□□ -2.4
CCNA1P78396 MIR6717-201ENST00000622747 73 ntBASIC0.06□□□□□ -2.4
CCNA1P78396 MIR4315-1-201ENST00000636800 73 ntBASIC0.06□□□□□ -2.4
CCNA1P78396 MIR4315-2-201ENST00000640925 73 ntBASIC0.06□□□□□ -2.4
CCNA1P78396 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.05□□□□□ -2.4
CCNA1P78396 MIR302B-201ENST00000362188 73 ntBASIC0.05□□□□□ -2.4
CCNA1P78396 Y_RNA.19-201ENST00000362462 99 ntBASIC0.05□□□□□ -2.4
CCNA1P78396 Y_RNA.210-201ENST00000364161 110 ntBASIC0.05□□□□□ -2.4
CCNA1P78396 Y_RNA.304-201ENST00000365011 112 ntBASIC0.05□□□□□ -2.4
CCNA1P78396 Y_RNA.410-201ENST00000383992 113 ntBASIC0.05□□□□□ -2.4
CCNA1P78396 SNORA26-201ENST00000391286 122 ntBASIC0.05□□□□□ -2.4
CCNA1P78396 Y_RNA.622-201ENST00000411091 108 ntBASIC0.05□□□□□ -2.4
CCNA1P78396 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.05□□□□□ -2.4
CCNA1P78396 RNU6-1299P-201ENST00000516316 100 ntBASIC0.05□□□□□ -2.4
CCNA1P78396 Y_RNA.721-201ENST00000517207 102 ntBASIC0.05□□□□□ -2.4
CCNA1P78396 AC112693.2-201ENST00000556538 232 ntBASIC0.05□□□□□ -2.4
CCNA1P78396 MIR376A2-201ENST00000636782 80 ntBASIC0.05□□□□□ -2.4
CCNA1P78396 Y_RNA.13-201ENST00000362403 112 ntBASIC0.04□□□□□ -2.4
CCNA1P78396 Y_RNA.32-201ENST00000362589 110 ntBASIC0.04□□□□□ -2.4
CCNA1P78396 RNU6-653P-201ENST00000363074 106 ntBASIC0.04□□□□□ -2.4
CCNA1P78396 RNU6-403P-201ENST00000363163 104 ntBASIC0.04□□□□□ -2.4
CCNA1P78396 RNU6-211P-201ENST00000384047 107 ntBASIC0.04□□□□□ -2.4
CCNA1P78396 Y_RNA.432-201ENST00000384087 111 ntBASIC0.04□□□□□ -2.4
CCNA1P78396 MT-TT-201ENST00000387460 66 ntBASIC0.04□□□□□ -2.4
CCNA1P78396 AL512326.2-201ENST00000426359 151 ntBASIC0.04□□□□□ -2.4
CCNA1P78396 MTND5P22-201ENST00000458380 195 ntBASIC0.04□□□□□ -2.4
CCNA1P78396 Y_RNA.28-201ENST00000362554 111 ntBASIC0.03□□□□□ -2.4
CCNA1P78396 Y_RNA.117-201ENST00000363294 101 ntBASIC0.03□□□□□ -2.4
CCNA1P78396 Y_RNA.152-201ENST00000363578 100 ntBASIC0.03□□□□□ -2.4
CCNA1P78396 RNU6-770P-201ENST00000363929 105 ntBASIC0.03□□□□□ -2.4
CCNA1P78396 Y_RNA.214-201ENST00000364201 112 ntBASIC0.03□□□□□ -2.4
CCNA1P78396 SNORA1-201ENST00000384107 130 ntBASIC0.03□□□□□ -2.4
CCNA1P78396 RNU6-1228P-201ENST00000391014 107 ntBASIC0.03□□□□□ -2.4
CCNA1P78396 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.03□□□□□ -2.4
CCNA1P78396 RNA5SP268-201ENST00000516828 124 ntBASIC0.03□□□□□ -2.4
CCNA1P78396 MIR5688-201ENST00000580619 83 ntBASIC0.03□□□□□ -2.4
CCNA1P78396 MIR4305-201ENST00000583252 102 ntBASIC0.03□□□□□ -2.4
CCNA1P78396 MIR7107-201ENST00000611489 80 ntBASIC0.03□□□□□ -2.4
CCNA1P78396 UBE2WP1-201ENST00000362030 340 ntBASIC0.02□□□□□ -2.41
CCNA1P78396 Y_RNA.64-201ENST00000362845 102 ntBASIC0.02□□□□□ -2.41
CCNA1P78396 Y_RNA.351-201ENST00000365436 96 ntBASIC0.02□□□□□ -2.41
CCNA1P78396 Y_RNA.431-201ENST00000384086 102 ntBASIC0.02□□□□□ -2.41
CCNA1P78396 RNU6-1289P-201ENST00000384431 106 ntBASIC0.02□□□□□ -2.41
CCNA1P78396 SNORA72.6-201ENST00000384520 129 ntBASIC0.02□□□□□ -2.41
CCNA1P78396 Y_RNA.527-201ENST00000384573 102 ntBASIC0.02□□□□□ -2.41
CCNA1P78396 MIR626-201ENST00000385032 94 ntBASIC0.02□□□□□ -2.41
CCNA1P78396 RNU2-59P-201ENST00000410482 191 ntBASIC0.02□□□□□ -2.41
CCNA1P78396 SUMO1P3-201ENST00000439961 304 ntBASIC0.02□□□□□ -2.41
CCNA1P78396 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.02□□□□□ -2.41
CCNA1P78396 SCARNA24.2-201ENST00000516968 130 ntBASIC0.02□□□□□ -2.41
CCNA1P78396 AC097639.2-201ENST00000603159 172 ntBASIC0.02□□□□□ -2.41
CCNA1P78396 MIR6759-201ENST00000638110 65 ntBASIC0.02□□□□□ -2.41
CCNA1P78396 Y_RNA.23-201ENST00000362496 106 ntBASIC0.01□□□□□ -2.41
CCNA1P78396 RNU6-1099P-201ENST00000363533 107 ntBASIC0.01□□□□□ -2.41
CCNA1P78396 RNU6-474P-201ENST00000384243 107 ntBASIC0.01□□□□□ -2.41
CCNA1P78396 RNU6-35P-201ENST00000384530 107 ntBASIC0.01□□□□□ -2.41
CCNA1P78396 U8.15-201ENST00000390947 134 ntBASIC0.01□□□□□ -2.41
CCNA1P78396 SEPT7P4-201ENST00000437076 306 ntBASIC0.01□□□□□ -2.41
CCNA1P78396 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.01□□□□□ -2.41
CCNA1P78396 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.01□□□□□ -2.41
CCNA1P78396 SERF1AP1-201ENST00000514575 187 ntBASIC0.01□□□□□ -2.41
CCNA1P78396 RNU7-129P-201ENST00000516128 62 ntBASIC0.01□□□□□ -2.41
CCNA1P78396 RNA5SP153-201ENST00000516498 76 ntBASIC0.01□□□□□ -2.41
CCNA1P78396 SNORA31.14-201ENST00000516728 116 ntBASIC0.01□□□□□ -2.41
CCNA1P78396 RNU6-988P-201ENST00000519081 107 ntBASIC0.01□□□□□ -2.41
CCNA1P78396 MIR3129-201ENST00000581095 76 ntBASIC0.01□□□□□ -2.41
CCNA1P78396 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.01□□□□□ -2.41
CCNA1P78396 MIR6082-201ENST00000613604 109 ntBASIC0.01□□□□□ -2.41
CCNA1P78396 AC091932.4-201ENST00000623386 200 ntBASIC0.01□□□□□ -2.41
CCNA1P78396 MIR371B-201ENST00000638082 66 ntBASIC0.01□□□□□ -2.41
CCNA1P78396 AL596211.1-201ENST00000569873 2277 ntBASIC0.01□□□□□ -2.41
CCNA1P78396 SNORA42.1-201ENST00000363515 137 ntBASIC0□□□□□ -2.41
CCNA1P78396 Y_RNA.199-201ENST00000364014 102 ntBASIC0□□□□□ -2.41
CCNA1P78396 snoU2_19.4-201ENST00000364329 80 ntBASIC0□□□□□ -2.41
CCNA1P78396 Y_RNA.275-201ENST00000364726 110 ntBASIC0□□□□□ -2.41
CCNA1P78396 Y_RNA.455-201ENST00000384230 98 ntBASIC0□□□□□ -2.41
CCNA1P78396 Y_RNA.588-201ENST00000391254 102 ntBASIC0□□□□□ -2.41
CCNA1P78396 AL606845.1-201ENST00000404881 255 ntBASIC0□□□□□ -2.41
CCNA1P78396 RNA5SP261-201ENST00000410536 106 ntBASIC0□□□□□ -2.41
CCNA1P78396 RNU6-1203P-201ENST00000410703 110 ntBASIC0□□□□□ -2.41
CCNA1P78396 RNU2-55P-201ENST00000411146 174 ntBASIC0□□□□□ -2.41
CCNA1P78396 AC022028.1-201ENST00000412054 408 ntBASIC0□□□□□ -2.41
CCNA1P78396 AC069271.1-201ENST00000445577 156 ntBASIC0□□□□□ -2.41
CCNA1P78396 MTND4P29-201ENST00000503122 1372 ntBASIC0□□□□□ -2.41
CCNA1P78396 RNU6-453P-201ENST00000516819 85 ntBASIC0□□□□□ -2.41
CCNA1P78396 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
CCNA1P78396 AC113195.1-201ENST00000579952 141 ntBASIC0□□□□□ -2.41
CCNA1P78396 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms