Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TPTEP1-208ENST00000636884 213 ntBASIC-1.29□□□□□ -2.62
HIST1H3AP68431 SNORA22.1-201ENST00000362701 134 ntBASIC-1.3□□□□□ -2.62
HIST1H3AP68431 RNU6-899P-201ENST00000363947 107 ntBASIC-1.3□□□□□ -2.62
HIST1H3AP68431 RNU6-144P-201ENST00000383951 107 ntBASIC-1.3□□□□□ -2.62
HIST1H3AP68431 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
HIST1H3AP68431 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.3□□□□□ -2.62
HIST1H3AP68431 RPS3AP52-201ENST00000435639 297 ntBASIC-1.3□□□□□ -2.62
HIST1H3AP68431 AC144568.1-201ENST00000520139 137 ntBASIC-1.3□□□□□ -2.62
HIST1H3AP68431 MIR3179-1-201ENST00000578940 84 ntBASIC-1.3□□□□□ -2.62
HIST1H3AP68431 MIR3179-2-201ENST00000579107 84 ntBASIC-1.3□□□□□ -2.62
HIST1H3AP68431 MIR3179-3-201ENST00000579566 84 ntBASIC-1.3□□□□□ -2.62
HIST1H3AP68431 MIR548H5-201ENST00000580314 60 ntBASIC-1.3□□□□□ -2.62
HIST1H3AP68431 MIR3179-4-201ENST00000617599 84 ntBASIC-1.3□□□□□ -2.62
HIST1H3AP68431 MIR1321-201ENST00000637766 79 ntBASIC-1.3□□□□□ -2.62
HIST1H3AP68431 AC099654.14-201ENST00000638599 341 ntBASIC-1.3□□□□□ -2.62
HIST1H3AP68431 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.31□□□□□ -2.62
HIST1H3AP68431 SNORD114-29-201ENST00000364819 70 ntBASIC-1.31□□□□□ -2.62
HIST1H3AP68431 SNORD115-44-201ENST00000365391 82 ntBASIC-1.31□□□□□ -2.62
HIST1H3AP68431 RNU6-900P-201ENST00000384498 102 ntBASIC-1.31□□□□□ -2.62
HIST1H3AP68431 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.31□□□□□ -2.62
HIST1H3AP68431 MIR517B-201ENST00000385102 67 ntBASIC-1.31□□□□□ -2.62
HIST1H3AP68431 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.31□□□□□ -2.62
HIST1H3AP68431 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.31□□□□□ -2.62
HIST1H3AP68431 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.31□□□□□ -2.62
HIST1H3AP68431 RNU6-138P-201ENST00000515952 107 ntBASIC-1.31□□□□□ -2.62
HIST1H3AP68431 RNU7-110P-201ENST00000516891 62 ntBASIC-1.31□□□□□ -2.62
HIST1H3AP68431 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.31□□□□□ -2.62
HIST1H3AP68431 MIR548AE1-201ENST00000583292 70 ntBASIC-1.31□□□□□ -2.62
HIST1H3AP68431 MIR4499-201ENST00000584834 69 ntBASIC-1.31□□□□□ -2.62
HIST1H3AP68431 U6.92-201ENST00000636464 89 ntBASIC-1.31□□□□□ -2.62
HIST1H3AP68431 RNU1-141P-201ENST00000364623 158 ntBASIC-1.32□□□□□ -2.62
HIST1H3AP68431 MIR628-201ENST00000385229 95 ntBASIC-1.32□□□□□ -2.62
HIST1H3AP68431 snoU13.13-201ENST00000458842 104 ntBASIC-1.32□□□□□ -2.62
HIST1H3AP68431 RNU7-4P-201ENST00000516961 62 ntBASIC-1.32□□□□□ -2.62
HIST1H3AP68431 RNY3P11-201ENST00000364153 102 ntBASIC-1.33□□□□□ -2.62
HIST1H3AP68431 MIR548F5-201ENST00000408421 86 ntBASIC-1.33□□□□□ -2.62
HIST1H3AP68431 MTND1P14-201ENST00000427400 950 ntBASIC-1.33□□□□□ -2.62
HIST1H3AP68431 RNU7-80P-201ENST00000459562 61 ntBASIC-1.33□□□□□ -2.62
HIST1H3AP68431 RNU6-274P-201ENST00000459566 107 ntBASIC-1.33□□□□□ -2.62
HIST1H3AP68431 RNU6-126P-201ENST00000516685 103 ntBASIC-1.33□□□□□ -2.62
HIST1H3AP68431 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.33□□□□□ -2.62
HIST1H3AP68431 YWHAEP2-201ENST00000580066 112 ntBASIC-1.33□□□□□ -2.62
HIST1H3AP68431 AC090582.1-201ENST00000636321 199 ntBASIC-1.33□□□□□ -2.62
HIST1H3AP68431 MIR6841-201ENST00000637129 72 ntBASIC-1.33□□□□□ -2.62
HIST1H3AP68431 RNU4-80P-201ENST00000363200 141 ntBASIC-1.34□□□□□ -2.62
HIST1H3AP68431 RNU4-70P-201ENST00000384579 139 ntBASIC-1.34□□□□□ -2.62
HIST1H3AP68431 MIR635-201ENST00000384830 98 ntBASIC-1.34□□□□□ -2.62
HIST1H3AP68431 SNORD22.1-201ENST00000516331 125 ntBASIC-1.34□□□□□ -2.62
HIST1H3AP68431 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.34□□□□□ -2.62
HIST1H3AP68431 AP003733.2-201ENST00000529409 171 ntBASIC-1.34□□□□□ -2.62
HIST1H3AP68431 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.34□□□□□ -2.62
HIST1H3AP68431 AC091932.4-201ENST00000623386 200 ntBASIC-1.34□□□□□ -2.62
HIST1H3AP68431 MIR367-201ENST00000362299 68 ntBASIC-1.35□□□□□ -2.63
HIST1H3AP68431 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.35□□□□□ -2.63
HIST1H3AP68431 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.35□□□□□ -2.63
HIST1H3AP68431 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.35□□□□□ -2.63
HIST1H3AP68431 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.35□□□□□ -2.63
HIST1H3AP68431 RNU6-154P-201ENST00000384306 106 ntBASIC-1.35□□□□□ -2.63
HIST1H3AP68431 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.35□□□□□ -2.63
HIST1H3AP68431 MIR599-201ENST00000385069 95 ntBASIC-1.35□□□□□ -2.63
HIST1H3AP68431 MIR518B-201ENST00000385127 83 ntBASIC-1.35□□□□□ -2.63
HIST1H3AP68431 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.35□□□□□ -2.63
HIST1H3AP68431 AL603914.1-201ENST00000401964 204 ntBASIC-1.35□□□□□ -2.63
HIST1H3AP68431 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.35□□□□□ -2.63
HIST1H3AP68431 RNU6-120P-201ENST00000516077 103 ntBASIC-1.35□□□□□ -2.63
HIST1H3AP68431 RNU7-79P-201ENST00000516082 62 ntBASIC-1.35□□□□□ -2.63
HIST1H3AP68431 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.35□□□□□ -2.63
HIST1H3AP68431 MIR3920-201ENST00000581751 86 ntBASIC-1.35□□□□□ -2.63
HIST1H3AP68431 RNU7-10P-201ENST00000607194 63 ntBASIC-1.35□□□□□ -2.63
HIST1H3AP68431 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.35□□□□□ -2.63
HIST1H3AP68431 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.36□□□□□ -2.63
HIST1H3AP68431 MIR548K-201ENST00000408406 116 ntBASIC-1.36□□□□□ -2.63
HIST1H3AP68431 MTATP6P23-201ENST00000440153 476 ntBASIC-1.36□□□□□ -2.63
HIST1H3AP68431 SNORA13-201ENST00000458790 133 ntBASIC-1.36□□□□□ -2.63
HIST1H3AP68431 RNU7-74P-201ENST00000459104 62 ntBASIC-1.36□□□□□ -2.63
HIST1H3AP68431 AC022137.1-201ENST00000483735 151 ntBASIC-1.36□□□□□ -2.63
HIST1H3AP68431 SCARNA17-201ENST00000516183 144 ntBASIC-1.36□□□□□ -2.63
HIST1H3AP68431 RNU6-264P-201ENST00000517134 104 ntBASIC-1.36□□□□□ -2.63
HIST1H3AP68431 AC140658.3-201ENST00000567603 271 ntBASIC-1.36□□□□□ -2.63
HIST1H3AP68431 U2.1-201ENST00000618978 145 ntBASIC-1.36□□□□□ -2.63
HIST1H3AP68431 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.37□□□□□ -2.63
HIST1H3AP68431 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.37□□□□□ -2.63
HIST1H3AP68431 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.37□□□□□ -2.63
HIST1H3AP68431 RNU2-66P-201ENST00000410650 161 ntBASIC-1.37□□□□□ -2.63
HIST1H3AP68431 AP000533.3-201ENST00000447704 118 ntBASIC-1.37□□□□□ -2.63
HIST1H3AP68431 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.37□□□□□ -2.63
HIST1H3AP68431 RNU6-397P-201ENST00000516226 104 ntBASIC-1.37□□□□□ -2.63
HIST1H3AP68431 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.37□□□□□ -2.63
HIST1H3AP68431 MIR6086-201ENST00000638065 55 ntBASIC-1.37□□□□□ -2.63
HIST1H3AP68431 RNU6-502P-201ENST00000362419 108 ntBASIC-1.38□□□□□ -2.63
HIST1H3AP68431 RNY1P2-201ENST00000364820 117 ntBASIC-1.38□□□□□ -2.63
HIST1H3AP68431 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.38□□□□□ -2.63
HIST1H3AP68431 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.38□□□□□ -2.63
HIST1H3AP68431 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.38□□□□□ -2.63
HIST1H3AP68431 RNU6-21P-201ENST00000384710 107 ntBASIC-1.38□□□□□ -2.63
HIST1H3AP68431 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.38□□□□□ -2.63
HIST1H3AP68431 MIR4724-201ENST00000579485 89 ntBASIC-1.38□□□□□ -2.63
HIST1H3AP68431 MIR3611-201ENST00000584484 83 ntBASIC-1.38□□□□□ -2.63
HIST1H3AP68431 AC021613.1-201ENST00000623880 111 ntBASIC-1.38□□□□□ -2.63
HIST1H3AP68431 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.39□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms