Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 MRPS35P2-201ENST00000508242 191 ntBASIC-1.04□□□□□ -2.58
HIST1H2BDP58876 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.04□□□□□ -2.58
HIST1H2BDP58876 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.04□□□□□ -2.58
HIST1H2BDP58876 RNU7-35P-201ENST00000517174 62 ntBASIC-1.04□□□□□ -2.58
HIST1H2BDP58876 AL121655.1-201ENST00000605811 308 ntBASIC-1.04□□□□□ -2.58
HIST1H2BDP58876 RNU7-10P-201ENST00000607194 63 ntBASIC-1.04□□□□□ -2.58
HIST1H2BDP58876 SNORD113-5-201ENST00000607261 78 ntBASIC-1.04□□□□□ -2.58
HIST1H2BDP58876 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.04□□□□□ -2.58
HIST1H2BDP58876 uc_338.10-201ENST00000621872 182 ntBASIC-1.04□□□□□ -2.58
HIST1H2BDP58876 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.05□□□□□ -2.58
HIST1H2BDP58876 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.05□□□□□ -2.58
HIST1H2BDP58876 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.05□□□□□ -2.58
HIST1H2BDP58876 RNU1-141P-201ENST00000364623 158 ntBASIC-1.05□□□□□ -2.58
HIST1H2BDP58876 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.05□□□□□ -2.58
HIST1H2BDP58876 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.05□□□□□ -2.58
HIST1H2BDP58876 RNY1P4-201ENST00000384595 115 ntBASIC-1.05□□□□□ -2.58
HIST1H2BDP58876 MIR526A2-201ENST00000390198 65 ntBASIC-1.05□□□□□ -2.58
HIST1H2BDP58876 RNU6-370P-201ENST00000411008 104 ntBASIC-1.05□□□□□ -2.58
HIST1H2BDP58876 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.05□□□□□ -2.58
HIST1H2BDP58876 AC245505.1-201ENST00000556398 224 ntBASIC-1.05□□□□□ -2.58
HIST1H2BDP58876 C8orf59P2-201ENST00000603441 271 ntBASIC-1.05□□□□□ -2.58
HIST1H2BDP58876 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.05□□□□□ -2.58
HIST1H2BDP58876 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.05□□□□□ -2.58
HIST1H2BDP58876 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.06□□□□□ -2.58
HIST1H2BDP58876 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.06□□□□□ -2.58
HIST1H2BDP58876 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.06□□□□□ -2.58
HIST1H2BDP58876 RNU6-484P-201ENST00000384016 107 ntBASIC-1.06□□□□□ -2.58
HIST1H2BDP58876 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.06□□□□□ -2.58
HIST1H2BDP58876 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.06□□□□□ -2.58
HIST1H2BDP58876 RNU4-70P-201ENST00000384579 139 ntBASIC-1.06□□□□□ -2.58
HIST1H2BDP58876 MIR635-201ENST00000384830 98 ntBASIC-1.06□□□□□ -2.58
HIST1H2BDP58876 AL603914.1-201ENST00000401964 204 ntBASIC-1.06□□□□□ -2.58
HIST1H2BDP58876 SNORD75.1-201ENST00000408373 60 ntBASIC-1.06□□□□□ -2.58
HIST1H2BDP58876 RNU6-893P-201ENST00000458841 100 ntBASIC-1.06□□□□□ -2.58
HIST1H2BDP58876 RNU7-74P-201ENST00000459104 62 ntBASIC-1.06□□□□□ -2.58
HIST1H2BDP58876 TRAJ51-201ENST00000504127 63 ntBASIC-1.06□□□□□ -2.58
HIST1H2BDP58876 RNA5SP153-201ENST00000516498 76 ntBASIC-1.06□□□□□ -2.58
HIST1H2BDP58876 RNU6-175P-201ENST00000516896 107 ntBASIC-1.06□□□□□ -2.58
HIST1H2BDP58876 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.06□□□□□ -2.58
HIST1H2BDP58876 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.06□□□□□ -2.58
HIST1H2BDP58876 AC098479.1-201ENST00000609225 154 ntBASIC-1.06□□□□□ -2.58
HIST1H2BDP58876 AL359757.2-201ENST00000624309 274 ntBASIC-1.06□□□□□ -2.58
HIST1H2BDP58876 Y_RNA.258-201ENST00000364613 105 ntBASIC-1.07□□□□□ -2.58
HIST1H2BDP58876 RNU6-923P-201ENST00000364753 107 ntBASIC-1.07□□□□□ -2.58
HIST1H2BDP58876 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.07□□□□□ -2.58
HIST1H2BDP58876 RNU6-429P-201ENST00000384582 108 ntBASIC-1.07□□□□□ -2.58
HIST1H2BDP58876 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.07□□□□□ -2.58
HIST1H2BDP58876 RNU2-55P-201ENST00000411146 174 ntBASIC-1.07□□□□□ -2.58
HIST1H2BDP58876 AC097635.1-201ENST00000450678 155 ntBASIC-1.07□□□□□ -2.58
HIST1H2BDP58876 MIR5690-201ENST00000583739 73 ntBASIC-1.07□□□□□ -2.58
HIST1H2BDP58876 AC097639.2-201ENST00000603159 172 ntBASIC-1.07□□□□□ -2.58
HIST1H2BDP58876 MIR4272-201ENST00000635924 64 ntBASIC-1.07□□□□□ -2.58
HIST1H2BDP58876 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.08□□□□□ -2.58
HIST1H2BDP58876 RNU4-10P-201ENST00000364383 140 ntBASIC-1.08□□□□□ -2.58
HIST1H2BDP58876 SNORD114-29-201ENST00000364819 70 ntBASIC-1.08□□□□□ -2.58
HIST1H2BDP58876 Y_RNA.393-201ENST00000383936 102 ntBASIC-1.08□□□□□ -2.58
HIST1H2BDP58876 MIR9-2-201ENST00000384838 87 ntBASIC-1.08□□□□□ -2.58
HIST1H2BDP58876 MIR559-201ENST00000385188 96 ntBASIC-1.08□□□□□ -2.58
HIST1H2BDP58876 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.08□□□□□ -2.58
HIST1H2BDP58876 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.08□□□□□ -2.58
HIST1H2BDP58876 PMCHL1-202ENST00000423102 261 ntBASIC-1.08□□□□□ -2.58
HIST1H2BDP58876 MTND4P17-201ENST00000470444 350 ntBASIC-1.08□□□□□ -2.58
HIST1H2BDP58876 MIR5688-201ENST00000580619 83 ntBASIC-1.08□□□□□ -2.58
HIST1H2BDP58876 MIR3129-201ENST00000581095 76 ntBASIC-1.08□□□□□ -2.58
HIST1H2BDP58876 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.09□□□□□ -2.58
HIST1H2BDP58876 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.09□□□□□ -2.58
HIST1H2BDP58876 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.09□□□□□ -2.58
HIST1H2BDP58876 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.09□□□□□ -2.58
HIST1H2BDP58876 TRBVB-201ENST00000477100 408 ntBASIC-1.09□□□□□ -2.58
HIST1H2BDP58876 RNU7-137P-201ENST00000516788 62 ntBASIC-1.09□□□□□ -2.58
HIST1H2BDP58876 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.09□□□□□ -2.58
HIST1H2BDP58876 AC007485.1-201ENST00000616755 206 ntBASIC-1.09□□□□□ -2.58
HIST1H2BDP58876 AC069503.3-201ENST00000618674 145 ntBASIC-1.09□□□□□ -2.58
HIST1H2BDP58876 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.1□□□□□ -2.59
HIST1H2BDP58876 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.1□□□□□ -2.59
HIST1H2BDP58876 MIR539-201ENST00000365690 78 ntBASIC-1.1□□□□□ -2.59
HIST1H2BDP58876 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.1□□□□□ -2.59
HIST1H2BDP58876 MIR204-201ENST00000385200 110 ntBASIC-1.1□□□□□ -2.59
HIST1H2BDP58876 AL445193.1-201ENST00000441183 141 ntBASIC-1.1□□□□□ -2.59
HIST1H2BDP58876 U8.20-201ENST00000459445 131 ntBASIC-1.1□□□□□ -2.59
HIST1H2BDP58876 RNU6-507P-201ENST00000516045 100 ntBASIC-1.1□□□□□ -2.59
HIST1H2BDP58876 RNU7-13P-201ENST00000516413 62 ntBASIC-1.1□□□□□ -2.59
HIST1H2BDP58876 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.1□□□□□ -2.59
HIST1H2BDP58876 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.1□□□□□ -2.59
HIST1H2BDP58876 RNU6-699P-201ENST00000517081 110 ntBASIC-1.1□□□□□ -2.59
HIST1H2BDP58876 RPS29P30-201ENST00000600975 111 ntBASIC-1.1□□□□□ -2.59
HIST1H2BDP58876 RNU4-16P-201ENST00000364737 141 ntBASIC-1.11□□□□□ -2.59
HIST1H2BDP58876 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.11□□□□□ -2.59
HIST1H2BDP58876 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.11□□□□□ -2.59
HIST1H2BDP58876 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.11□□□□□ -2.59
HIST1H2BDP58876 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.11□□□□□ -2.59
HIST1H2BDP58876 SNORA53-201ENST00000391141 249 ntBASIC-1.11□□□□□ -2.59
HIST1H2BDP58876 RNA5SP451-201ENST00000410588 110 ntBASIC-1.11□□□□□ -2.59
HIST1H2BDP58876 SNRPGP8-201ENST00000454064 226 ntBASIC-1.11□□□□□ -2.59
HIST1H2BDP58876 AC021146.6-201ENST00000514659 117 ntBASIC-1.11□□□□□ -2.59
HIST1H2BDP58876 SNORD67.1-201ENST00000516618 108 ntBASIC-1.11□□□□□ -2.59
HIST1H2BDP58876 RNU7-30P-201ENST00000516835 62 ntBASIC-1.11□□□□□ -2.59
HIST1H2BDP58876 RNU7-70P-201ENST00000516941 66 ntBASIC-1.11□□□□□ -2.59
HIST1H2BDP58876 AC040926.1-201ENST00000530195 238 ntBASIC-1.11□□□□□ -2.59
HIST1H2BDP58876 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 256.1 ms