Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RNU6-326P-201ENST00000365480 107 ntBASIC-0.01□□□□□ -2.41
VSX2P58304 SNORA63.7-201ENST00000365579 123 ntBASIC-0.01□□□□□ -2.41
VSX2P58304 RNU6-484P-201ENST00000384016 107 ntBASIC-0.01□□□□□ -2.41
VSX2P58304 MIR626-201ENST00000385032 94 ntBASIC-0.01□□□□□ -2.41
VSX2P58304 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.01□□□□□ -2.41
VSX2P58304 PCNPP3-201ENST00000393579 471 ntBASIC-0.01□□□□□ -2.41
VSX2P58304 MIR1252-201ENST00000408861 65 ntBASIC-0.01□□□□□ -2.41
VSX2P58304 AL512326.2-201ENST00000426359 151 ntBASIC-0.01□□□□□ -2.41
VSX2P58304 SEPT7P4-201ENST00000437076 306 ntBASIC-0.01□□□□□ -2.41
VSX2P58304 SUMO1P3-201ENST00000439961 304 ntBASIC-0.01□□□□□ -2.41
VSX2P58304 MTND3P22-201ENST00000510932 243 ntBASIC-0.01□□□□□ -2.41
VSX2P58304 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
VSX2P58304 AC006006.1-201ENST00000603082 144 ntBASIC-0.01□□□□□ -2.41
VSX2P58304 MIR411-201ENST00000362239 96 ntBASIC-0.02□□□□□ -2.41
VSX2P58304 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.02□□□□□ -2.41
VSX2P58304 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
VSX2P58304 SNORA42.1-201ENST00000363515 137 ntBASIC-0.02□□□□□ -2.41
VSX2P58304 RNU6-770P-201ENST00000363929 105 ntBASIC-0.02□□□□□ -2.41
VSX2P58304 SNORD42.2-201ENST00000365570 69 ntBASIC-0.02□□□□□ -2.41
VSX2P58304 RNU6-211P-201ENST00000384047 107 ntBASIC-0.02□□□□□ -2.41
VSX2P58304 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.02□□□□□ -2.41
VSX2P58304 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.02□□□□□ -2.41
VSX2P58304 AP003733.2-201ENST00000529409 171 ntBASIC-0.02□□□□□ -2.41
VSX2P58304 MIR4491-201ENST00000581087 68 ntBASIC-0.02□□□□□ -2.41
VSX2P58304 AC104408.1-201ENST00000605241 170 ntBASIC-0.02□□□□□ -2.41
VSX2P58304 MIR6082-201ENST00000613604 109 ntBASIC-0.02□□□□□ -2.41
VSX2P58304 AL662814.1-201ENST00000617364 121 ntBASIC-0.02□□□□□ -2.41
VSX2P58304 SNORA25.1-201ENST00000362326 128 ntBASIC-0.03□□□□□ -2.41
VSX2P58304 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.03□□□□□ -2.41
VSX2P58304 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.03□□□□□ -2.41
VSX2P58304 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.03□□□□□ -2.41
VSX2P58304 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.03□□□□□ -2.41
VSX2P58304 SNORA26-201ENST00000391286 122 ntBASIC-0.03□□□□□ -2.41
VSX2P58304 MTND5P20-201ENST00000448677 143 ntBASIC-0.03□□□□□ -2.41
VSX2P58304 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.03□□□□□ -2.41
VSX2P58304 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.03□□□□□ -2.41
VSX2P58304 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.03□□□□□ -2.41
VSX2P58304 RNU6-453P-201ENST00000516819 85 ntBASIC-0.03□□□□□ -2.41
VSX2P58304 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.03□□□□□ -2.41
VSX2P58304 MIR302B-201ENST00000362188 73 ntBASIC-0.04□□□□□ -2.42
VSX2P58304 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.04□□□□□ -2.42
VSX2P58304 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.04□□□□□ -2.42
VSX2P58304 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.04□□□□□ -2.42
VSX2P58304 RNU6-474P-201ENST00000384243 107 ntBASIC-0.04□□□□□ -2.42
VSX2P58304 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.04□□□□□ -2.42
VSX2P58304 AL731563.1-201ENST00000442202 214 ntBASIC-0.04□□□□□ -2.42
VSX2P58304 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.04□□□□□ -2.42
VSX2P58304 RNY3P15-201ENST00000516297 97 ntBASIC-0.04□□□□□ -2.42
VSX2P58304 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.04□□□□□ -2.42
VSX2P58304 MTND5P34-201ENST00000568888 325 ntBASIC-0.04□□□□□ -2.42
VSX2P58304 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.04□□□□□ -2.42
VSX2P58304 MIR4290-201ENST00000583807 95 ntBASIC-0.04□□□□□ -2.42
VSX2P58304 MIR6828-201ENST00000636181 60 ntBASIC-0.04□□□□□ -2.42
VSX2P58304 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.05□□□□□ -2.42
VSX2P58304 RNY3P14-201ENST00000384309 102 ntBASIC-0.05□□□□□ -2.42
VSX2P58304 SNORA8.3-201ENST00000384679 139 ntBASIC-0.05□□□□□ -2.42
VSX2P58304 RNA5SP237-201ENST00000410414 113 ntBASIC-0.05□□□□□ -2.42
VSX2P58304 RNU6-651P-201ENST00000411040 105 ntBASIC-0.05□□□□□ -2.42
VSX2P58304 MTND5P22-201ENST00000458380 195 ntBASIC-0.05□□□□□ -2.42
VSX2P58304 RNA5SP285-201ENST00000516619 119 ntBASIC-0.05□□□□□ -2.42
VSX2P58304 RNA5SP47-201ENST00000517230 109 ntBASIC-0.05□□□□□ -2.42
VSX2P58304 AC141846.1-201ENST00000568348 142 ntBASIC-0.05□□□□□ -2.42
VSX2P58304 MIR5688-201ENST00000580619 83 ntBASIC-0.05□□□□□ -2.42
VSX2P58304 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.05□□□□□ -2.42
VSX2P58304 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.06□□□□□ -2.42
VSX2P58304 RNU6-653P-201ENST00000363074 106 ntBASIC-0.06□□□□□ -2.42
VSX2P58304 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.06□□□□□ -2.42
VSX2P58304 RNU6-291P-201ENST00000384720 107 ntBASIC-0.06□□□□□ -2.42
VSX2P58304 MIR329-2-201ENST00000385029 84 ntBASIC-0.06□□□□□ -2.42
VSX2P58304 SNORA53-201ENST00000391141 249 ntBASIC-0.06□□□□□ -2.42
VSX2P58304 RNU6-101P-201ENST00000410323 104 ntBASIC-0.06□□□□□ -2.42
VSX2P58304 RNU6-561P-201ENST00000516222 102 ntBASIC-0.06□□□□□ -2.42
VSX2P58304 RNU6-469P-201ENST00000516253 101 ntBASIC-0.06□□□□□ -2.42
VSX2P58304 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.06□□□□□ -2.42
VSX2P58304 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.06□□□□□ -2.42
VSX2P58304 MIR4752-201ENST00000579672 72 ntBASIC-0.06□□□□□ -2.42
VSX2P58304 MIR3129-201ENST00000581095 76 ntBASIC-0.06□□□□□ -2.42
VSX2P58304 MTND4P29-201ENST00000503122 1372 ntBASIC-0.06□□□□□ -2.42
VSX2P58304 UBE2WP1-201ENST00000362030 340 ntBASIC-0.07□□□□□ -2.42
VSX2P58304 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.07□□□□□ -2.42
VSX2P58304 SNORD114-5-201ENST00000362928 70 ntBASIC-0.07□□□□□ -2.42
VSX2P58304 RNU6-514P-201ENST00000384208 107 ntBASIC-0.07□□□□□ -2.42
VSX2P58304 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.07□□□□□ -2.42
VSX2P58304 SNORD28-201ENST00000384706 75 ntBASIC-0.07□□□□□ -2.42
VSX2P58304 MIR643-201ENST00000385267 97 ntBASIC-0.07□□□□□ -2.42
VSX2P58304 RNU6-127P-201ENST00000390897 107 ntBASIC-0.07□□□□□ -2.42
VSX2P58304 RNU2-55P-201ENST00000411146 174 ntBASIC-0.07□□□□□ -2.42
VSX2P58304 RNA5SP153-201ENST00000516498 76 ntBASIC-0.07□□□□□ -2.42
VSX2P58304 SNORA25.16-201ENST00000516741 121 ntBASIC-0.07□□□□□ -2.42
VSX2P58304 AC091932.4-201ENST00000623386 200 ntBASIC-0.07□□□□□ -2.42
VSX2P58304 AL596211.1-201ENST00000569873 2277 ntBASIC-0.07□□□□□ -2.42
VSX2P58304 SNORA9.1-201ENST00000362412 131 ntBASIC-0.08□□□□□ -2.42
VSX2P58304 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.08□□□□□ -2.42
VSX2P58304 RNA5SP245-201ENST00000364239 121 ntBASIC-0.08□□□□□ -2.42
VSX2P58304 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.08□□□□□ -2.42
VSX2P58304 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.08□□□□□ -2.42
VSX2P58304 AL606845.1-201ENST00000404881 255 ntBASIC-0.08□□□□□ -2.42
VSX2P58304 RPL39P25-201ENST00000449384 154 ntBASIC-0.08□□□□□ -2.42
VSX2P58304 TRBVB-201ENST00000477100 408 ntBASIC-0.08□□□□□ -2.42
VSX2P58304 RNA5SP227-201ENST00000516184 113 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms