Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MIR6841-201ENST00000637129 72 ntBASIC1.19□□□□□ -2.22
CDH12P55289 RNU6-396P-201ENST00000365369 105 ntBASIC1.18□□□□□ -2.22
CDH12P55289 Y_RNA.366-201ENST00000365540 102 ntBASIC1.18□□□□□ -2.22
CDH12P55289 MIR150-201ENST00000385048 84 ntBASIC1.18□□□□□ -2.22
CDH12P55289 POLR2J4-204ENST00000418424 324 ntBASIC1.18□□□□□ -2.22
CDH12P55289 AC244023.1-201ENST00000426884 112 ntBASIC1.18□□□□□ -2.22
CDH12P55289 RNU11-2P-201ENST00000516898 142 ntBASIC1.18□□□□□ -2.22
CDH12P55289 AC242498.1-201ENST00000604134 111 ntBASIC1.18□□□□□ -2.22
CDH12P55289 TUG1_4.1-201ENST00000619464 181 ntBASIC1.18□□□□□ -2.22
CDH12P55289 AC091895.1-201ENST00000624494 256 ntBASIC1.18□□□□□ -2.22
CDH12P55289 Y_RNA.430-201ENST00000384081 110 ntBASIC1.17□□□□□ -2.22
CDH12P55289 SNORA17.3-201ENST00000391159 129 ntBASIC1.17□□□□□ -2.22
CDH12P55289 RNA5SP95-201ENST00000410319 137 ntBASIC1.17□□□□□ -2.22
CDH12P55289 RNA5SP261-201ENST00000410536 106 ntBASIC1.17□□□□□ -2.22
CDH12P55289 RNA5SP144-201ENST00000410846 116 ntBASIC1.17□□□□□ -2.22
CDH12P55289 RPS3AP1-201ENST00000413190 320 ntBASIC1.17□□□□□ -2.22
CDH12P55289 snoU13.23-201ENST00000458863 104 ntBASIC1.17□□□□□ -2.22
CDH12P55289 AC004223.1-201ENST00000479840 271 ntBASIC1.17□□□□□ -2.22
CDH12P55289 SNORD79.1-201ENST00000516069 84 ntBASIC1.17□□□□□ -2.22
CDH12P55289 RNU6-1258P-201ENST00000516911 111 ntBASIC1.17□□□□□ -2.22
CDH12P55289 RNU6-971P-201ENST00000516920 106 ntBASIC1.17□□□□□ -2.22
CDH12P55289 IGKV1-22-201ENST00000524313 326 ntBASIC1.17□□□□□ -2.22
CDH12P55289 AC133485.4-201ENST00000561835 220 ntBASIC1.17□□□□□ -2.22
CDH12P55289 AC138907.4-201ENST00000570107 226 ntBASIC1.17□□□□□ -2.22
CDH12P55289 Y_RNA.757-201ENST00000578934 114 ntBASIC1.17□□□□□ -2.22
CDH12P55289 MIR3152-201ENST00000579801 74 ntBASIC1.17□□□□□ -2.22
CDH12P55289 SEPT14P17-201ENST00000617978 177 ntBASIC1.17□□□□□ -2.22
CDH12P55289 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.17□□□□□ -2.22
CDH12P55289 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.17□□□□□ -2.22
CDH12P55289 SNORA22.1-201ENST00000362701 134 ntBASIC1.16□□□□□ -2.22
CDH12P55289 AL158147.1-201ENST00000443970 75 ntBASIC1.16□□□□□ -2.22
CDH12P55289 RNU6-1211P-201ENST00000459179 105 ntBASIC1.16□□□□□ -2.22
CDH12P55289 RNU7-21P-201ENST00000459430 62 ntBASIC1.16□□□□□ -2.22
CDH12P55289 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.16□□□□□ -2.22
CDH12P55289 RNU2-35P-201ENST00000516446 142 ntBASIC1.16□□□□□ -2.22
CDH12P55289 MIR2115-201ENST00000516657 100 ntBASIC1.16□□□□□ -2.22
CDH12P55289 SNORA70.22-201ENST00000517160 124 ntBASIC1.16□□□□□ -2.22
CDH12P55289 RNU6-235P-201ENST00000362644 107 ntBASIC1.15□□□□□ -2.23
CDH12P55289 Y_RNA.330-201ENST00000365230 109 ntBASIC1.15□□□□□ -2.23
CDH12P55289 SNORA80D-201ENST00000384488 135 ntBASIC1.15□□□□□ -2.23
CDH12P55289 SNORD38B-201ENST00000384690 67 ntBASIC1.15□□□□□ -2.23
CDH12P55289 SNORD12C-201ENST00000386307 89 ntBASIC1.15□□□□□ -2.23
CDH12P55289 RNU6-613P-201ENST00000410412 108 ntBASIC1.15□□□□□ -2.23
CDH12P55289 TMSB4XP3-201ENST00000445144 114 ntBASIC1.15□□□□□ -2.23
CDH12P55289 RN7SKP179-201ENST00000516126 217 ntBASIC1.15□□□□□ -2.23
CDH12P55289 MIR3910-1-201ENST00000580936 111 ntBASIC1.15□□□□□ -2.23
CDH12P55289 MIR4305-201ENST00000583252 102 ntBASIC1.15□□□□□ -2.23
CDH12P55289 AC021443.1-201ENST00000604478 211 ntBASIC1.15□□□□□ -2.23
CDH12P55289 SNORD38B-202ENST00000625943 69 ntBASIC1.15□□□□□ -2.23
CDH12P55289 Y_RNA.171-201ENST00000363760 102 ntBASIC1.14□□□□□ -2.23
CDH12P55289 SNORA25-201ENST00000384384 134 ntBASIC1.14□□□□□ -2.23
CDH12P55289 RNU6-205P-201ENST00000390858 107 ntBASIC1.14□□□□□ -2.23
CDH12P55289 SNORA40.6-201ENST00000391153 128 ntBASIC1.14□□□□□ -2.23
CDH12P55289 RNU4-62P-201ENST00000410125 130 ntBASIC1.14□□□□□ -2.23
CDH12P55289 AL591704.2-201ENST00000421658 181 ntBASIC1.14□□□□□ -2.23
CDH12P55289 AC015712.3-201ENST00000559380 164 ntBASIC1.14□□□□□ -2.23
CDH12P55289 MIR4421-201ENST00000578133 69 ntBASIC1.14□□□□□ -2.23
CDH12P55289 MIR4524B-201ENST00000581569 115 ntBASIC1.14□□□□□ -2.23
CDH12P55289 MIR3660-201ENST00000584845 100 ntBASIC1.14□□□□□ -2.23
CDH12P55289 AL512598.1-201ENST00000610158 273 ntBASIC1.14□□□□□ -2.23
CDH12P55289 AL137067.1-201ENST00000615933 120 ntBASIC1.14□□□□□ -2.23
CDH12P55289 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.14□□□□□ -2.23
CDH12P55289 AL353997.5-201ENST00000618886 171 ntBASIC1.14□□□□□ -2.23
CDH12P55289 MIR26B-201ENST00000362251 77 ntBASIC1.13□□□□□ -2.23
CDH12P55289 MT-TN-201ENST00000387400 73 ntBASIC1.13□□□□□ -2.23
CDH12P55289 Y_RNA.617-201ENST00000410920 90 ntBASIC1.13□□□□□ -2.23
CDH12P55289 AL512326.2-201ENST00000426359 151 ntBASIC1.13□□□□□ -2.23
CDH12P55289 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.13□□□□□ -2.23
CDH12P55289 RNU7-164P-201ENST00000459221 62 ntBASIC1.13□□□□□ -2.23
CDH12P55289 RN7SKP19-201ENST00000516016 252 ntBASIC1.13□□□□□ -2.23
CDH12P55289 MIR4264-201ENST00000583520 66 ntBASIC1.13□□□□□ -2.23
CDH12P55289 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
CDH12P55289 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CDH12P55289 AC008163.1-202ENST00000636004 2889 ntBASIC1.12□□□□□ -2.23
CDH12P55289 Y_RNA.218-201ENST00000364218 104 ntBASIC1.12□□□□□ -2.23
CDH12P55289 RNU6-647P-201ENST00000364243 107 ntBASIC1.12□□□□□ -2.23
CDH12P55289 MIR539-201ENST00000365690 78 ntBASIC1.12□□□□□ -2.23
CDH12P55289 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
CDH12P55289 RNU7-123P-201ENST00000515911 60 ntBASIC1.12□□□□□ -2.23
CDH12P55289 AC036111.3-201ENST00000526389 112 ntBASIC1.12□□□□□ -2.23
CDH12P55289 AC019288.1-201ENST00000557918 224 ntBASIC1.12□□□□□ -2.23
CDH12P55289 AP000753.3-201ENST00000604083 169 ntBASIC1.12□□□□□ -2.23
CDH12P55289 MIR6740-201ENST00000618268 113 ntBASIC1.12□□□□□ -2.23
CDH12P55289 AC027335.2-201ENST00000624030 375 ntBASIC1.12□□□□□ -2.23
CDH12P55289 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CDH12P55289 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
CDH12P55289 MIR377-201ENST00000362145 69 ntBASIC1.11□□□□□ -2.23
CDH12P55289 Y_RNA.298-201ENST00000364960 107 ntBASIC1.11□□□□□ -2.23
CDH12P55289 RNU6-580P-201ENST00000365159 107 ntBASIC1.11□□□□□ -2.23
CDH12P55289 Y_RNA.354-201ENST00000365448 111 ntBASIC1.11□□□□□ -2.23
CDH12P55289 RNU6-81P-201ENST00000365608 104 ntBASIC1.11□□□□□ -2.23
CDH12P55289 Y_RNA.470-201ENST00000384307 117 ntBASIC1.11□□□□□ -2.23
CDH12P55289 MIR222-201ENST00000384992 110 ntBASIC1.11□□□□□ -2.23
CDH12P55289 SNORD12-201ENST00000391002 90 ntBASIC1.11□□□□□ -2.23
CDH12P55289 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.11□□□□□ -2.23
CDH12P55289 MIR1285-1-201ENST00000408593 84 ntBASIC1.11□□□□□ -2.23
CDH12P55289 AL022718.1-201ENST00000412004 84 ntBASIC1.11□□□□□ -2.23
CDH12P55289 AC002429.1-201ENST00000437672 148 ntBASIC1.11□□□□□ -2.23
CDH12P55289 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.11□□□□□ -2.23
CDH12P55289 RNU6-781P-201ENST00000516377 101 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms