Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 SNORD3E-202ENST00000627253 216 ntBASIC1.53□□□□□ -2.16
THBS3P49746 MIR1255B1-201ENST00000636325 63 ntBASIC1.53□□□□□ -2.16
THBS3P49746 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.53□□□□□ -2.17
THBS3P49746 MIR488-201ENST00000365739 83 ntBASIC1.52□□□□□ -2.17
THBS3P49746 Y_RNA.544-201ENST00000384650 113 ntBASIC1.52□□□□□ -2.17
THBS3P49746 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.52□□□□□ -2.17
THBS3P49746 AL445685.2-201ENST00000422551 342 ntBASIC1.52□□□□□ -2.17
THBS3P49746 RPS29P29-201ENST00000456396 171 ntBASIC1.52□□□□□ -2.17
THBS3P49746 HMGN2P23-201ENST00000456759 269 ntBASIC1.52□□□□□ -2.17
THBS3P49746 AC107297.1-201ENST00000459991 176 ntBASIC1.52□□□□□ -2.17
THBS3P49746 RNU2-13P-201ENST00000515909 113 ntBASIC1.52□□□□□ -2.17
THBS3P49746 SNORA72.7-201ENST00000516349 94 ntBASIC1.52□□□□□ -2.17
THBS3P49746 SNORA40.13-201ENST00000516379 120 ntBASIC1.52□□□□□ -2.17
THBS3P49746 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.52□□□□□ -2.17
THBS3P49746 RNA5SP481-201ENST00000516814 122 ntBASIC1.52□□□□□ -2.17
THBS3P49746 SNORA31.17-201ENST00000516953 127 ntBASIC1.52□□□□□ -2.17
THBS3P49746 MIR3618-201ENST00000580330 88 ntBASIC1.52□□□□□ -2.17
THBS3P49746 MIR4791-201ENST00000607666 84 ntBASIC1.52□□□□□ -2.17
THBS3P49746 AL353997.5-201ENST00000618886 171 ntBASIC1.52□□□□□ -2.17
THBS3P49746 RNA5SP276-201ENST00000362580 94 ntBASIC1.51□□□□□ -2.17
THBS3P49746 RNU6-457P-201ENST00000363999 107 ntBASIC1.51□□□□□ -2.17
THBS3P49746 SNORA24-201ENST00000384096 131 ntBASIC1.51□□□□□ -2.17
THBS3P49746 Y_RNA.470-201ENST00000384307 117 ntBASIC1.51□□□□□ -2.17
THBS3P49746 RNU6-1319P-201ENST00000390855 104 ntBASIC1.51□□□□□ -2.17
THBS3P49746 RNU6-913P-201ENST00000390913 95 ntBASIC1.51□□□□□ -2.17
THBS3P49746 RNU6-747P-201ENST00000390928 104 ntBASIC1.51□□□□□ -2.17
THBS3P49746 RNU6-241P-201ENST00000391148 104 ntBASIC1.51□□□□□ -2.17
THBS3P49746 SNORA26.6-201ENST00000391256 115 ntBASIC1.51□□□□□ -2.17
THBS3P49746 RNU6-177P-201ENST00000411257 104 ntBASIC1.51□□□□□ -2.17
THBS3P49746 RNU7-113P-201ENST00000459273 62 ntBASIC1.51□□□□□ -2.17
THBS3P49746 RNU6-904P-201ENST00000516206 101 ntBASIC1.51□□□□□ -2.17
THBS3P49746 FAM106DP-201ENST00000586416 501 ntBASIC1.51□□□□□ -2.17
THBS3P49746 MIR6845-201ENST00000613182 61 ntBASIC1.51□□□□□ -2.17
THBS3P49746 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
THBS3P49746 MIR6841-201ENST00000637129 72 ntBASIC1.51□□□□□ -2.17
THBS3P49746 MIR424-201ENST00000362227 98 ntBASIC1.5□□□□□ -2.17
THBS3P49746 RNU6-661P-201ENST00000362409 107 ntBASIC1.5□□□□□ -2.17
THBS3P49746 SNORA22.1-201ENST00000362701 134 ntBASIC1.5□□□□□ -2.17
THBS3P49746 Y_RNA.78-201ENST00000362970 110 ntBASIC1.5□□□□□ -2.17
THBS3P49746 SNORD115-19-201ENST00000363098 82 ntBASIC1.5□□□□□ -2.17
THBS3P49746 SNORD115-18-201ENST00000363293 82 ntBASIC1.5□□□□□ -2.17
THBS3P49746 RNA5SP99-201ENST00000364020 114 ntBASIC1.5□□□□□ -2.17
THBS3P49746 SNORD115-17-201ENST00000364612 82 ntBASIC1.5□□□□□ -2.17
THBS3P49746 SNORA70.7-201ENST00000384159 133 ntBASIC1.5□□□□□ -2.17
THBS3P49746 MIR1912-201ENST00000410389 80 ntBASIC1.5□□□□□ -2.17
THBS3P49746 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.5□□□□□ -2.17
THBS3P49746 MIR1270-201ENST00000459320 83 ntBASIC1.5□□□□□ -2.17
THBS3P49746 RNU7-53P-201ENST00000516705 60 ntBASIC1.5□□□□□ -2.17
THBS3P49746 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.5□□□□□ -2.17
THBS3P49746 AC243994.1-201ENST00000618627 109 ntBASIC1.5□□□□□ -2.17
THBS3P49746 Y_RNA.818-201ENST00000618813 71 ntBASIC1.5□□□□□ -2.17
THBS3P49746 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.49□□□□□ -2.17
THBS3P49746 SNORA40.18-201ENST00000391200 128 ntBASIC1.49□□□□□ -2.17
THBS3P49746 HMGN1P33-201ENST00000432945 451 ntBASIC1.49□□□□□ -2.17
THBS3P49746 MIR548AE2-201ENST00000583456 67 ntBASIC1.49□□□□□ -2.17
THBS3P49746 AL020996.3-201ENST00000606617 222 ntBASIC1.49□□□□□ -2.17
THBS3P49746 U1.36-201ENST00000620684 176 ntBASIC1.49□□□□□ -2.17
THBS3P49746 RNU6-294P-201ENST00000364999 102 ntBASIC1.48□□□□□ -2.17
THBS3P49746 RNU6-203P-201ENST00000384038 104 ntBASIC1.48□□□□□ -2.17
THBS3P49746 Y_RNA.507-201ENST00000384500 99 ntBASIC1.48□□□□□ -2.17
THBS3P49746 RNY1P7-201ENST00000384743 110 ntBASIC1.48□□□□□ -2.17
THBS3P49746 RNU4-69P-201ENST00000410677 143 ntBASIC1.48□□□□□ -2.17
THBS3P49746 RPS3AP1-201ENST00000413190 320 ntBASIC1.48□□□□□ -2.17
THBS3P49746 MTATP8P2-201ENST00000435212 202 ntBASIC1.48□□□□□ -2.17
THBS3P49746 RPL23AP6-201ENST00000446637 472 ntBASIC1.48□□□□□ -2.17
THBS3P49746 RNU7-73P-201ENST00000458743 63 ntBASIC1.48□□□□□ -2.17
THBS3P49746 RNA5SP57-201ENST00000459463 123 ntBASIC1.48□□□□□ -2.17
THBS3P49746 RNU6-917P-201ENST00000516294 104 ntBASIC1.48□□□□□ -2.17
THBS3P49746 RNU6-970P-201ENST00000516312 107 ntBASIC1.48□□□□□ -2.17
THBS3P49746 RNA5SP33-201ENST00000516687 98 ntBASIC1.48□□□□□ -2.17
THBS3P49746 MIR4419B-201ENST00000577260 68 ntBASIC1.48□□□□□ -2.17
THBS3P49746 MIR4299-201ENST00000577899 72 ntBASIC1.48□□□□□ -2.17
THBS3P49746 MIR3152-201ENST00000579801 74 ntBASIC1.48□□□□□ -2.17
THBS3P49746 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.48□□□□□ -2.17
THBS3P49746 MIR6717-201ENST00000622747 73 ntBASIC1.48□□□□□ -2.17
THBS3P49746 SNORD115-2-201ENST00000362842 82 ntBASIC1.47□□□□□ -2.17
THBS3P49746 RNU6-363P-201ENST00000362895 105 ntBASIC1.47□□□□□ -2.17
THBS3P49746 RNY3P2-201ENST00000362918 102 ntBASIC1.47□□□□□ -2.17
THBS3P49746 RNU6-1099P-201ENST00000363533 107 ntBASIC1.47□□□□□ -2.17
THBS3P49746 Y_RNA.155-201ENST00000363632 101 ntBASIC1.47□□□□□ -2.17
THBS3P49746 SNORD73B-201ENST00000364394 72 ntBASIC1.47□□□□□ -2.17
THBS3P49746 RNU4-67P-201ENST00000364569 141 ntBASIC1.47□□□□□ -2.17
THBS3P49746 SNORD115-20-201ENST00000365099 82 ntBASIC1.47□□□□□ -2.17
THBS3P49746 Y_RNA.360-201ENST00000365512 102 ntBASIC1.47□□□□□ -2.17
THBS3P49746 RNU6-616P-201ENST00000384353 107 ntBASIC1.47□□□□□ -2.17
THBS3P49746 MIR605-201ENST00000385078 83 ntBASIC1.47□□□□□ -2.17
THBS3P49746 AL353813.1-201ENST00000440700 253 ntBASIC1.47□□□□□ -2.17
THBS3P49746 SNORA74.3-201ENST00000517108 154 ntBASIC1.47□□□□□ -2.17
THBS3P49746 DEFB131E-201ENST00000532329 154 ntBASIC1.47□□□□□ -2.17
THBS3P49746 DNAJC19P9-201ENST00000555084 351 ntBASIC1.47□□□□□ -2.17
THBS3P49746 Y_RNA.299-201ENST00000364973 94 ntBASIC1.46□□□□□ -2.18
THBS3P49746 SNORA32-201ENST00000384072 121 ntBASIC1.46□□□□□ -2.18
THBS3P49746 Y_RNA.537-201ENST00000384626 109 ntBASIC1.46□□□□□ -2.18
THBS3P49746 RNU6-997P-201ENST00000384725 107 ntBASIC1.46□□□□□ -2.18
THBS3P49746 MIR577-201ENST00000385196 96 ntBASIC1.46□□□□□ -2.18
THBS3P49746 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
THBS3P49746 RNU6-733P-201ENST00000410759 104 ntBASIC1.46□□□□□ -2.18
THBS3P49746 RNU6-893P-201ENST00000458841 100 ntBASIC1.46□□□□□ -2.18
THBS3P49746 RNU6-158P-201ENST00000517104 100 ntBASIC1.46□□□□□ -2.18
THBS3P49746 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms