Protein–RNA interactions for Protein: P48378

RFX2, DNA-binding protein RFX2, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2P48378 RNU6-1056P-201ENST00000383996 107 ntBASIC1.3□□□□□ -2.2
RFX2P48378 MIR583-201ENST00000384846 75 ntBASIC1.3□□□□□ -2.2
RFX2P48378 MT-TI-201ENST00000387365 69 ntBASIC1.3□□□□□ -2.2
RFX2P48378 RNA5SP261-201ENST00000410536 106 ntBASIC1.3□□□□□ -2.2
RFX2P48378 RPS3AP1-201ENST00000413190 320 ntBASIC1.3□□□□□ -2.2
RFX2P48378 RPS27P16-201ENST00000425758 201 ntBASIC1.3□□□□□ -2.2
RFX2P48378 RPL39P39-201ENST00000455840 151 ntBASIC1.3□□□□□ -2.2
RFX2P48378 Y_RNA.649-201ENST00000459077 103 ntBASIC1.3□□□□□ -2.2
RFX2P48378 COX6CP6-201ENST00000490840 228 ntBASIC1.3□□□□□ -2.2
RFX2P48378 RNU6-165P-201ENST00000517170 99 ntBASIC1.3□□□□□ -2.2
RFX2P48378 AL512310.8-201ENST00000550183 120 ntBASIC1.3□□□□□ -2.2
RFX2P48378 MIR3664-201ENST00000579074 99 ntBASIC1.3□□□□□ -2.2
RFX2P48378 AL670379.3-201ENST00000605040 251 ntBASIC1.3□□□□□ -2.2
RFX2P48378 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.3□□□□□ -2.2
RFX2P48378 MIR6841-201ENST00000637129 72 ntBASIC1.3□□□□□ -2.2
RFX2P48378 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
RFX2P48378 RNU6-1144P-201ENST00000384247 104 ntBASIC1.29□□□□□ -2.2
RFX2P48378 SNORD20-201ENST00000384550 80 ntBASIC1.29□□□□□ -2.2
RFX2P48378 RNU6-429P-201ENST00000384582 108 ntBASIC1.29□□□□□ -2.2
RFX2P48378 MIR1304-201ENST00000408243 91 ntBASIC1.29□□□□□ -2.2
RFX2P48378 RNU7-113P-201ENST00000459273 62 ntBASIC1.29□□□□□ -2.2
RFX2P48378 RNA5SP445-201ENST00000515889 115 ntBASIC1.29□□□□□ -2.2
RFX2P48378 AC004812.1-201ENST00000540773 146 ntBASIC1.29□□□□□ -2.2
RFX2P48378 CYP3A52P-201ENST00000563326 91 ntBASIC1.29□□□□□ -2.2
RFX2P48378 MIR502-201ENST00000606349 86 ntBASIC1.29□□□□□ -2.2
RFX2P48378 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.29□□□□□ -2.2
RFX2P48378 Z97988.1-201ENST00000637697 135 ntBASIC1.29□□□□□ -2.2
RFX2P48378 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
RFX2P48378 AL391516.1-201ENST00000554380 2449 ntBASIC1.29□□□□□ -2.2
RFX2P48378 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.29□□□□□ -2.2
RFX2P48378 Y_RNA.198-201ENST00000364013 98 ntBASIC1.28□□□□□ -2.2
RFX2P48378 Y_RNA.213-201ENST00000364178 111 ntBASIC1.28□□□□□ -2.2
RFX2P48378 RNU6-1325P-201ENST00000364905 105 ntBASIC1.28□□□□□ -2.2
RFX2P48378 Y_RNA.470-201ENST00000384307 117 ntBASIC1.28□□□□□ -2.2
RFX2P48378 Y_RNA.531-201ENST00000384589 121 ntBASIC1.28□□□□□ -2.2
RFX2P48378 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
RFX2P48378 RNU1-78P-201ENST00000391248 165 ntBASIC1.28□□□□□ -2.2
RFX2P48378 RNU6-602P-201ENST00000411155 105 ntBASIC1.28□□□□□ -2.2
RFX2P48378 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.28□□□□□ -2.2
RFX2P48378 RPL30P7-201ENST00000479312 323 ntBASIC1.28□□□□□ -2.2
RFX2P48378 MIR4255-201ENST00000579351 72 ntBASIC1.28□□□□□ -2.2
RFX2P48378 MIR4422-201ENST00000581938 83 ntBASIC1.28□□□□□ -2.2
RFX2P48378 AP000942.3-201ENST00000603702 160 ntBASIC1.28□□□□□ -2.2
RFX2P48378 RNU6-834P-201ENST00000362367 110 ntBASIC1.27□□□□□ -2.21
RFX2P48378 Y_RNA.430-201ENST00000384081 110 ntBASIC1.27□□□□□ -2.21
RFX2P48378 MIR1302-7-201ENST00000408841 72 ntBASIC1.27□□□□□ -2.21
RFX2P48378 AC245047.7-201ENST00000440265 293 ntBASIC1.27□□□□□ -2.21
RFX2P48378 RPL23AP94-201ENST00000512518 302 ntBASIC1.27□□□□□ -2.21
RFX2P48378 RNA5SP33-201ENST00000516687 98 ntBASIC1.27□□□□□ -2.21
RFX2P48378 PRELID3BP2-201ENST00000605362 201 ntBASIC1.27□□□□□ -2.21
RFX2P48378 BX248123.2-201ENST00000606318 124 ntBASIC1.27□□□□□ -2.21
RFX2P48378 MIR8065-201ENST00000620577 100 ntBASIC1.27□□□□□ -2.21
RFX2P48378 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.27□□□□□ -2.21
RFX2P48378 SNORD116-21-201ENST00000384507 92 ntBASIC1.26□□□□□ -2.21
RFX2P48378 MIR759-201ENST00000390224 91 ntBASIC1.26□□□□□ -2.21
RFX2P48378 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.26□□□□□ -2.21
RFX2P48378 RNU6-893P-201ENST00000458841 100 ntBASIC1.26□□□□□ -2.21
RFX2P48378 AL133373.1-201ENST00000497098 94 ntBASIC1.26□□□□□ -2.21
RFX2P48378 AC113410.1-201ENST00000505029 247 ntBASIC1.26□□□□□ -2.21
RFX2P48378 RN7SKP88-201ENST00000516847 250 ntBASIC1.26□□□□□ -2.21
RFX2P48378 AC068338.1-201ENST00000565567 176 ntBASIC1.26□□□□□ -2.21
RFX2P48378 7SK.8-201ENST00000612110 250 ntBASIC1.26□□□□□ -2.21
RFX2P48378 7SK.11-201ENST00000615477 250 ntBASIC1.26□□□□□ -2.21
RFX2P48378 7SK.13-201ENST00000622040 250 ntBASIC1.26□□□□□ -2.21
RFX2P48378 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
RFX2P48378 Y_RNA.35-201ENST00000362601 101 ntBASIC1.25□□□□□ -2.21
RFX2P48378 SNORD114-1-201ENST00000362705 72 ntBASIC1.25□□□□□ -2.21
RFX2P48378 RNU6-215P-201ENST00000365169 102 ntBASIC1.25□□□□□ -2.21
RFX2P48378 SNORD38B-201ENST00000384690 67 ntBASIC1.25□□□□□ -2.21
RFX2P48378 MIR150-201ENST00000385048 84 ntBASIC1.25□□□□□ -2.21
RFX2P48378 SNORD12C-201ENST00000386307 89 ntBASIC1.25□□□□□ -2.21
RFX2P48378 MIR1185-1-201ENST00000408598 86 ntBASIC1.25□□□□□ -2.21
RFX2P48378 AC245517.4-201ENST00000448601 281 ntBASIC1.25□□□□□ -2.21
RFX2P48378 RPS23P4-201ENST00000487908 423 ntBASIC1.25□□□□□ -2.21
RFX2P48378 RNU7-6P-201ENST00000516845 62 ntBASIC1.25□□□□□ -2.21
RFX2P48378 MIR548AE2-201ENST00000583456 67 ntBASIC1.25□□□□□ -2.21
RFX2P48378 SNORD38B-202ENST00000625943 69 ntBASIC1.25□□□□□ -2.21
RFX2P48378 AL161722.3-201ENST00000605789 2983 ntBASIC1.25□□□□□ -2.21
RFX2P48378 MIR103A2-201ENST00000362154 78 ntBASIC1.24□□□□□ -2.21
RFX2P48378 RNA5SP264-201ENST00000363115 107 ntBASIC1.24□□□□□ -2.21
RFX2P48378 RNA5SP126-201ENST00000365092 109 ntBASIC1.24□□□□□ -2.21
RFX2P48378 SNORA32-201ENST00000384072 121 ntBASIC1.24□□□□□ -2.21
RFX2P48378 RNU6-342P-201ENST00000384521 104 ntBASIC1.24□□□□□ -2.21
RFX2P48378 Y_RNA.549-201ENST00000384657 102 ntBASIC1.24□□□□□ -2.21
RFX2P48378 MIR504-201ENST00000385065 83 ntBASIC1.24□□□□□ -2.21
RFX2P48378 AC048334.1-201ENST00000477975 159 ntBASIC1.24□□□□□ -2.21
RFX2P48378 RNU6-902P-201ENST00000517212 91 ntBASIC1.24□□□□□ -2.21
RFX2P48378 AC007012.1-201ENST00000567192 175 ntBASIC1.24□□□□□ -2.21
RFX2P48378 MIR3163-201ENST00000581592 73 ntBASIC1.24□□□□□ -2.21
RFX2P48378 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.24□□□□□ -2.21
RFX2P48378 SNORD115-2-201ENST00000362842 82 ntBASIC1.23□□□□□ -2.21
RFX2P48378 SNORD115-20-201ENST00000365099 82 ntBASIC1.23□□□□□ -2.21
RFX2P48378 RNU6-1237P-201ENST00000384777 107 ntBASIC1.23□□□□□ -2.21
RFX2P48378 MIR517C-201ENST00000385103 95 ntBASIC1.23□□□□□ -2.21
RFX2P48378 MIR1323-201ENST00000408090 73 ntBASIC1.23□□□□□ -2.21
RFX2P48378 AC244023.1-201ENST00000426884 112 ntBASIC1.23□□□□□ -2.21
RFX2P48378 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.23□□□□□ -2.21
RFX2P48378 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.23□□□□□ -2.21
RFX2P48378 AP003716.2-201ENST00000528260 108 ntBASIC1.23□□□□□ -2.21
RFX2P48378 AC242498.1-201ENST00000604134 111 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms