Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 RNU2-11P-201ENST00000459191 187 ntBASIC0.74□□□□□ -2.29
BRCC3P46736 RNU6-998P-201ENST00000515894 101 ntBASIC0.74□□□□□ -2.29
BRCC3P46736 Y_RNA.797-201ENST00000515977 94 ntBASIC0.74□□□□□ -2.29
BRCC3P46736 MIR2115-201ENST00000516657 100 ntBASIC0.74□□□□□ -2.29
BRCC3P46736 AC009779.6-201ENST00000603972 165 ntBASIC0.74□□□□□ -2.29
BRCC3P46736 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
BRCC3P46736 AC023934.1-201ENST00000574529 2389 ntBASIC0.73□□□□□ -2.29
BRCC3P46736 MIR411-201ENST00000362239 96 ntBASIC0.73□□□□□ -2.29
BRCC3P46736 Y_RNA.121-201ENST00000363309 113 ntBASIC0.73□□□□□ -2.29
BRCC3P46736 RNU6-379P-201ENST00000363813 104 ntBASIC0.73□□□□□ -2.29
BRCC3P46736 Y_RNA.200-201ENST00000364018 102 ntBASIC0.73□□□□□ -2.29
BRCC3P46736 Y_RNA.410-201ENST00000383992 113 ntBASIC0.73□□□□□ -2.29
BRCC3P46736 Y_RNA.540-201ENST00000384638 111 ntBASIC0.73□□□□□ -2.29
BRCC3P46736 RPS3AP1-201ENST00000413190 320 ntBASIC0.73□□□□□ -2.29
BRCC3P46736 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.73□□□□□ -2.29
BRCC3P46736 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.73□□□□□ -2.29
BRCC3P46736 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.73□□□□□ -2.29
BRCC3P46736 MRPS18CP4-201ENST00000535821 231 ntBASIC0.73□□□□□ -2.29
BRCC3P46736 MIR378D2-201ENST00000580636 98 ntBASIC0.73□□□□□ -2.29
BRCC3P46736 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.73□□□□□ -2.29
BRCC3P46736 AC078938.1-201ENST00000620993 318 ntBASIC0.73□□□□□ -2.29
BRCC3P46736 Z97988.1-201ENST00000637697 135 ntBASIC0.73□□□□□ -2.29
BRCC3P46736 Y_RNA.83-201ENST00000363005 113 ntBASIC0.72□□□□□ -2.29
BRCC3P46736 Y_RNA.168-201ENST00000363740 102 ntBASIC0.72□□□□□ -2.29
BRCC3P46736 Y_RNA.351-201ENST00000365436 96 ntBASIC0.72□□□□□ -2.29
BRCC3P46736 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
BRCC3P46736 SNORD89-201ENST00000390981 114 ntBASIC0.72□□□□□ -2.29
BRCC3P46736 SNORA26.6-201ENST00000391256 115 ntBASIC0.72□□□□□ -2.29
BRCC3P46736 SNORD111-201ENST00000408139 94 ntBASIC0.72□□□□□ -2.29
BRCC3P46736 RNU6-602P-201ENST00000411155 105 ntBASIC0.72□□□□□ -2.29
BRCC3P46736 AL365205.2-201ENST00000594586 68 ntBASIC0.72□□□□□ -2.29
BRCC3P46736 RNU6-275P-201ENST00000364910 107 ntBASIC0.71□□□□□ -2.3
BRCC3P46736 RNU6-597P-201ENST00000365620 102 ntBASIC0.71□□□□□ -2.3
BRCC3P46736 RNU4-70P-201ENST00000384579 139 ntBASIC0.71□□□□□ -2.3
BRCC3P46736 SNORD12C-201ENST00000386307 89 ntBASIC0.71□□□□□ -2.3
BRCC3P46736 snosnR66.1-201ENST00000391095 99 ntBASIC0.71□□□□□ -2.3
BRCC3P46736 Y_RNA.618-201ENST00000410949 107 ntBASIC0.71□□□□□ -2.3
BRCC3P46736 SNORD83.1-201ENST00000411362 77 ntBASIC0.71□□□□□ -2.3
BRCC3P46736 AC006461.1-201ENST00000412637 326 ntBASIC0.71□□□□□ -2.3
BRCC3P46736 SEPT7P4-201ENST00000437076 306 ntBASIC0.71□□□□□ -2.3
BRCC3P46736 U7.7-201ENST00000459276 60 ntBASIC0.71□□□□□ -2.3
BRCC3P46736 RNU6-1219P-201ENST00000516143 112 ntBASIC0.71□□□□□ -2.3
BRCC3P46736 RNU6-1271P-201ENST00000517049 105 ntBASIC0.71□□□□□ -2.3
BRCC3P46736 MIR5197-201ENST00000583721 112 ntBASIC0.71□□□□□ -2.3
BRCC3P46736 AL590095.2-201ENST00000604136 117 ntBASIC0.71□□□□□ -2.3
BRCC3P46736 MIR6740-201ENST00000618268 113 ntBASIC0.71□□□□□ -2.3
BRCC3P46736 RNU6-1292P-201ENST00000383856 107 ntBASIC0.7□□□□□ -2.3
BRCC3P46736 RNU6-643P-201ENST00000384018 107 ntBASIC0.7□□□□□ -2.3
BRCC3P46736 Y_RNA.542-201ENST00000384641 111 ntBASIC0.7□□□□□ -2.3
BRCC3P46736 MT-TN-201ENST00000387400 73 ntBASIC0.7□□□□□ -2.3
BRCC3P46736 SNORA79-201ENST00000408376 140 ntBASIC0.7□□□□□ -2.3
BRCC3P46736 RNU7-96P-201ENST00000459535 64 ntBASIC0.7□□□□□ -2.3
BRCC3P46736 SCARNA15-202ENST00000516881 127 ntBASIC0.7□□□□□ -2.3
BRCC3P46736 RNU6-388P-201ENST00000517012 105 ntBASIC0.7□□□□□ -2.3
BRCC3P46736 RNU6-389P-201ENST00000517048 105 ntBASIC0.7□□□□□ -2.3
BRCC3P46736 MTND5P32-201ENST00000560711 1802 ntBASIC0.7□□□□□ -2.3
BRCC3P46736 HSBP1P2-201ENST00000299671 229 ntBASIC0.69□□□□□ -2.3
BRCC3P46736 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.69□□□□□ -2.3
BRCC3P46736 Y_RNA.75-201ENST00000362927 97 ntBASIC0.69□□□□□ -2.3
BRCC3P46736 Y_RNA.188-201ENST00000363952 111 ntBASIC0.69□□□□□ -2.3
BRCC3P46736 MIR548I3-201ENST00000408378 149 ntBASIC0.69□□□□□ -2.3
BRCC3P46736 AC113410.1-201ENST00000505029 247 ntBASIC0.69□□□□□ -2.3
BRCC3P46736 RNU6-1110P-201ENST00000516462 101 ntBASIC0.69□□□□□ -2.3
BRCC3P46736 SNORD116-25-201ENST00000516517 92 ntBASIC0.69□□□□□ -2.3
BRCC3P46736 RNU7-53P-201ENST00000516705 60 ntBASIC0.69□□□□□ -2.3
BRCC3P46736 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.69□□□□□ -2.3
BRCC3P46736 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.69□□□□□ -2.3
BRCC3P46736 AC025627.3-201ENST00000582078 182 ntBASIC0.69□□□□□ -2.3
BRCC3P46736 AL353765.1-201ENST00000605514 183 ntBASIC0.69□□□□□ -2.3
BRCC3P46736 MIR6717-201ENST00000622747 73 ntBASIC0.69□□□□□ -2.3
BRCC3P46736 AC091932.4-201ENST00000623386 200 ntBASIC0.69□□□□□ -2.3
BRCC3P46736 MIR377-201ENST00000362145 69 ntBASIC0.68□□□□□ -2.3
BRCC3P46736 RNU6-342P-201ENST00000384521 104 ntBASIC0.68□□□□□ -2.3
BRCC3P46736 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.68□□□□□ -2.3
BRCC3P46736 RNU6-994P-201ENST00000410507 111 ntBASIC0.68□□□□□ -2.3
BRCC3P46736 MIR4264-201ENST00000583520 66 ntBASIC0.68□□□□□ -2.3
BRCC3P46736 AC020891.4-201ENST00000605745 93 ntBASIC0.68□□□□□ -2.3
BRCC3P46736 AC141273.2-201ENST00000618989 130 ntBASIC0.68□□□□□ -2.3
BRCC3P46736 MIR6513-201ENST00000621188 64 ntBASIC0.68□□□□□ -2.3
BRCC3P46736 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.68□□□□□ -2.3
BRCC3P46736 RNY1P11-201ENST00000363759 113 ntBASIC0.67□□□□□ -2.3
BRCC3P46736 RNU6-1082P-201ENST00000364574 107 ntBASIC0.67□□□□□ -2.3
BRCC3P46736 SNORA1.1-201ENST00000364671 133 ntBASIC0.67□□□□□ -2.3
BRCC3P46736 Y_RNA.435-201ENST00000384095 112 ntBASIC0.67□□□□□ -2.3
BRCC3P46736 Y_RNA.489-201ENST00000384410 101 ntBASIC0.67□□□□□ -2.3
BRCC3P46736 RNU6-110P-201ENST00000384508 104 ntBASIC0.67□□□□□ -2.3
BRCC3P46736 SNORD38B-201ENST00000384690 67 ntBASIC0.67□□□□□ -2.3
BRCC3P46736 MIR588-201ENST00000384900 83 ntBASIC0.67□□□□□ -2.3
BRCC3P46736 MIR613-201ENST00000385248 95 ntBASIC0.67□□□□□ -2.3
BRCC3P46736 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
BRCC3P46736 MIR1827-201ENST00000408549 66 ntBASIC0.67□□□□□ -2.3
BRCC3P46736 MTND5P15-201ENST00000434246 349 ntBASIC0.67□□□□□ -2.3
BRCC3P46736 AP000753.3-201ENST00000604083 169 ntBASIC0.67□□□□□ -2.3
BRCC3P46736 SNORD38B-202ENST00000625943 69 ntBASIC0.67□□□□□ -2.3
BRCC3P46736 AL596211.1-201ENST00000569873 2277 ntBASIC0.67□□□□□ -2.3
BRCC3P46736 RNU6-1020P-201ENST00000363684 107 ntBASIC0.66□□□□□ -2.3
BRCC3P46736 Y_RNA.233-201ENST00000364407 101 ntBASIC0.66□□□□□ -2.3
BRCC3P46736 Y_RNA.297-201ENST00000364950 91 ntBASIC0.66□□□□□ -2.3
BRCC3P46736 RNU6-934P-201ENST00000365154 107 ntBASIC0.66□□□□□ -2.3
BRCC3P46736 RNU6-768P-201ENST00000384683 107 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms