Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 MIR5197-201ENST00000583721 112 ntBASIC0.33□□□□□ -2.36
KRT20P35900 snoU2_19.4-201ENST00000364329 80 ntBASIC0.32□□□□□ -2.36
KRT20P35900 RNA5SP117-201ENST00000365294 118 ntBASIC0.32□□□□□ -2.36
KRT20P35900 Y_RNA.351-201ENST00000365436 96 ntBASIC0.32□□□□□ -2.36
KRT20P35900 SNORA1-201ENST00000384107 130 ntBASIC0.32□□□□□ -2.36
KRT20P35900 Y_RNA.508-201ENST00000384502 114 ntBASIC0.32□□□□□ -2.36
KRT20P35900 RNU6-1109P-201ENST00000391187 107 ntBASIC0.32□□□□□ -2.36
KRT20P35900 MTCYBP6-201ENST00000441810 138 ntBASIC0.32□□□□□ -2.36
KRT20P35900 AL356055.1-201ENST00000602528 446 ntBASIC0.32□□□□□ -2.36
KRT20P35900 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
KRT20P35900 MIR342-201ENST00000362212 99 ntBASIC0.31□□□□□ -2.36
KRT20P35900 Y_RNA.199-201ENST00000364014 102 ntBASIC0.31□□□□□ -2.36
KRT20P35900 Y_RNA.237-201ENST00000364439 102 ntBASIC0.31□□□□□ -2.36
KRT20P35900 VTRNA1-3-201ENST00000365645 89 ntBASIC0.31□□□□□ -2.36
KRT20P35900 RNU6-1292P-201ENST00000383856 107 ntBASIC0.31□□□□□ -2.36
KRT20P35900 AP003327.1-201ENST00000529684 127 ntBASIC0.31□□□□□ -2.36
KRT20P35900 AC022523.2-201ENST00000561045 150 ntBASIC0.31□□□□□ -2.36
KRT20P35900 MIR3152-201ENST00000579801 74 ntBASIC0.31□□□□□ -2.36
KRT20P35900 MIR4282-201ENST00000583613 67 ntBASIC0.31□□□□□ -2.36
KRT20P35900 Y_RNA.23-201ENST00000362496 106 ntBASIC0.3□□□□□ -2.36
KRT20P35900 SNORD44.1-201ENST00000363202 61 ntBASIC0.3□□□□□ -2.36
KRT20P35900 Y_RNA.355-201ENST00000365462 98 ntBASIC0.3□□□□□ -2.36
KRT20P35900 RNU6-713P-201ENST00000384761 107 ntBASIC0.3□□□□□ -2.36
KRT20P35900 MIR598-201ENST00000384868 97 ntBASIC0.3□□□□□ -2.36
KRT20P35900 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
KRT20P35900 RNU6-863P-201ENST00000515989 104 ntBASIC0.3□□□□□ -2.36
KRT20P35900 RNU6-453P-201ENST00000516819 85 ntBASIC0.3□□□□□ -2.36
KRT20P35900 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.3□□□□□ -2.36
KRT20P35900 AL662814.1-201ENST00000617364 121 ntBASIC0.3□□□□□ -2.36
KRT20P35900 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.3□□□□□ -2.36
KRT20P35900 AL589743.1-201ENST00000551932 2712 ntBASIC0.29□□□□□ -2.36
KRT20P35900 SNORD118-201ENST00000363593 134 ntBASIC0.29□□□□□ -2.36
KRT20P35900 RNY1-201ENST00000364228 113 ntBASIC0.29□□□□□ -2.36
KRT20P35900 RNU6-381P-201ENST00000391259 108 ntBASIC0.29□□□□□ -2.36
KRT20P35900 SNORA79-201ENST00000408376 140 ntBASIC0.29□□□□□ -2.36
KRT20P35900 Y_RNA.590-201ENST00000410140 107 ntBASIC0.29□□□□□ -2.36
KRT20P35900 Y_RNA.618-201ENST00000410949 107 ntBASIC0.29□□□□□ -2.36
KRT20P35900 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.29□□□□□ -2.36
KRT20P35900 RNA5SP436-201ENST00000516020 115 ntBASIC0.29□□□□□ -2.36
KRT20P35900 MIR3678-201ENST00000578455 94 ntBASIC0.29□□□□□ -2.36
KRT20P35900 AL365205.2-201ENST00000594586 68 ntBASIC0.29□□□□□ -2.36
KRT20P35900 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.29□□□□□ -2.36
KRT20P35900 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.29□□□□□ -2.36
KRT20P35900 MIR376A2-201ENST00000636782 80 ntBASIC0.29□□□□□ -2.36
KRT20P35900 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
KRT20P35900 Y_RNA.42-201ENST00000362660 108 ntBASIC0.28□□□□□ -2.36
KRT20P35900 RNU6-797P-201ENST00000363101 109 ntBASIC0.28□□□□□ -2.36
KRT20P35900 SNORD93-201ENST00000408813 74 ntBASIC0.28□□□□□ -2.36
KRT20P35900 RNU4-43P-201ENST00000410628 137 ntBASIC0.28□□□□□ -2.36
KRT20P35900 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.28□□□□□ -2.36
KRT20P35900 AC091932.4-201ENST00000623386 200 ntBASIC0.28□□□□□ -2.36
KRT20P35900 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.28□□□□□ -2.36
KRT20P35900 U6.104-201ENST00000637979 90 ntBASIC0.28□□□□□ -2.36
KRT20P35900 RNU6-728P-201ENST00000365375 104 ntBASIC0.27□□□□□ -2.37
KRT20P35900 SNORA8.2-201ENST00000384372 139 ntBASIC0.27□□□□□ -2.37
KRT20P35900 RNA5SP237-201ENST00000410414 113 ntBASIC0.27□□□□□ -2.37
KRT20P35900 RNU6-651P-201ENST00000411040 105 ntBASIC0.27□□□□□ -2.37
KRT20P35900 MIR8066-201ENST00000617280 78 ntBASIC0.27□□□□□ -2.37
KRT20P35900 AL365265.1-201ENST00000621045 234 ntBASIC0.27□□□□□ -2.37
KRT20P35900 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.27□□□□□ -2.37
KRT20P35900 MIR103A1-201ENST00000362165 78 ntBASIC0.26□□□□□ -2.37
KRT20P35900 Y_RNA.118-201ENST00000363300 101 ntBASIC0.26□□□□□ -2.37
KRT20P35900 SNORD114-23-201ENST00000363536 72 ntBASIC0.26□□□□□ -2.37
KRT20P35900 Y_RNA.518-201ENST00000384552 113 ntBASIC0.26□□□□□ -2.37
KRT20P35900 RNA5SP193-201ENST00000410353 107 ntBASIC0.26□□□□□ -2.37
KRT20P35900 RNU4-83P-201ENST00000410863 133 ntBASIC0.26□□□□□ -2.37
KRT20P35900 RPL39P25-201ENST00000449384 154 ntBASIC0.26□□□□□ -2.37
KRT20P35900 SNRPGP12-201ENST00000449481 213 ntBASIC0.26□□□□□ -2.37
KRT20P35900 RNU7-45P-201ENST00000459460 63 ntBASIC0.26□□□□□ -2.37
KRT20P35900 Y_RNA.701-201ENST00000516812 110 ntBASIC0.26□□□□□ -2.37
KRT20P35900 MIR3129-201ENST00000581095 76 ntBASIC0.26□□□□□ -2.37
KRT20P35900 AC044792.1-201ENST00000593294 196 ntBASIC0.26□□□□□ -2.37
KRT20P35900 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.26□□□□□ -2.37
KRT20P35900 RNU6-103P-201ENST00000363686 107 ntBASIC0.25□□□□□ -2.37
KRT20P35900 RNU4-17P-201ENST00000365598 141 ntBASIC0.25□□□□□ -2.37
KRT20P35900 Y_RNA.679-201ENST00000516416 91 ntBASIC0.25□□□□□ -2.37
KRT20P35900 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.25□□□□□ -2.37
KRT20P35900 AC078938.1-201ENST00000620993 318 ntBASIC0.25□□□□□ -2.37
KRT20P35900 Y_RNA.176-201ENST00000363815 109 ntBASIC0.24□□□□□ -2.37
KRT20P35900 SNORA20-201ENST00000384662 132 ntBASIC0.24□□□□□ -2.37
KRT20P35900 Y_RNA.567-201ENST00000384736 106 ntBASIC0.24□□□□□ -2.37
KRT20P35900 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.24□□□□□ -2.37
KRT20P35900 Y_RNA.673-201ENST00000516306 88 ntBASIC0.24□□□□□ -2.37
KRT20P35900 SNORA25.18-201ENST00000607153 114 ntBASIC0.24□□□□□ -2.37
KRT20P35900 MIR6841-201ENST00000637129 72 ntBASIC0.24□□□□□ -2.37
KRT20P35900 RNU6-1099P-201ENST00000363533 107 ntBASIC0.23□□□□□ -2.37
KRT20P35900 RNU6-1227P-201ENST00000383981 107 ntBASIC0.23□□□□□ -2.37
KRT20P35900 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.23□□□□□ -2.37
KRT20P35900 RNU6-469P-201ENST00000516253 101 ntBASIC0.23□□□□□ -2.37
KRT20P35900 AC133485.4-201ENST00000561835 220 ntBASIC0.23□□□□□ -2.37
KRT20P35900 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
KRT20P35900 AL596211.1-201ENST00000569873 2277 ntBASIC0.22□□□□□ -2.37
KRT20P35900 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
KRT20P35900 Y_RNA.422-201ENST00000384054 114 ntBASIC0.22□□□□□ -2.37
KRT20P35900 RNU6-135P-201ENST00000516769 101 ntBASIC0.22□□□□□ -2.37
KRT20P35900 RNU6-765P-201ENST00000516916 99 ntBASIC0.22□□□□□ -2.37
KRT20P35900 AL442663.2-201ENST00000554385 511 ntBASIC0.22□□□□□ -2.37
KRT20P35900 MIR4431-201ENST00000579990 94 ntBASIC0.22□□□□□ -2.37
KRT20P35900 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
KRT20P35900 RNU6-349P-201ENST00000362402 107 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 190.7 ms