Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RNU7-104P-201ENST00000459398 79 ntBASIC-0.69□□□□□ -2.52
RPA3P35244 SNORD126-201ENST00000459475 77 ntBASIC-0.69□□□□□ -2.52
RPA3P35244 AP001180.6-201ENST00000584918 159 ntBASIC-0.69□□□□□ -2.52
RPA3P35244 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.69□□□□□ -2.52
RPA3P35244 AC091932.4-201ENST00000623386 200 ntBASIC-0.69□□□□□ -2.52
RPA3P35244 MIR6841-201ENST00000637129 72 ntBASIC-0.69□□□□□ -2.52
RPA3P35244 RNU4-10P-201ENST00000364383 140 ntBASIC-0.7□□□□□ -2.52
RPA3P35244 RNU6-702P-201ENST00000364982 107 ntBASIC-0.7□□□□□ -2.52
RPA3P35244 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.7□□□□□ -2.52
RPA3P35244 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.7□□□□□ -2.52
RPA3P35244 SNORA20-201ENST00000384662 132 ntBASIC-0.7□□□□□ -2.52
RPA3P35244 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.7□□□□□ -2.52
RPA3P35244 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.7□□□□□ -2.52
RPA3P35244 SNORD116.3-201ENST00000517176 78 ntBASIC-0.7□□□□□ -2.52
RPA3P35244 MIR5589-201ENST00000579442 60 ntBASIC-0.7□□□□□ -2.52
RPA3P35244 MIR148A-201ENST00000362215 68 ntBASIC-0.71□□□□□ -2.52
RPA3P35244 SNORA22.1-201ENST00000362701 134 ntBASIC-0.71□□□□□ -2.52
RPA3P35244 RNU4-58P-201ENST00000363192 141 ntBASIC-0.71□□□□□ -2.52
RPA3P35244 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.71□□□□□ -2.52
RPA3P35244 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.71□□□□□ -2.52
RPA3P35244 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.71□□□□□ -2.52
RPA3P35244 SNORA1-201ENST00000384107 130 ntBASIC-0.71□□□□□ -2.52
RPA3P35244 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.71□□□□□ -2.52
RPA3P35244 MTATP6P26-201ENST00000445926 662 ntBASIC-0.71□□□□□ -2.52
RPA3P35244 AC244505.6-201ENST00000452829 130 ntBASIC-0.71□□□□□ -2.52
RPA3P35244 RNU7-80P-201ENST00000459562 61 ntBASIC-0.71□□□□□ -2.52
RPA3P35244 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.71□□□□□ -2.52
RPA3P35244 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.71□□□□□ -2.52
RPA3P35244 AL162726.3-218ENST00000636401 95 ntBASIC-0.71□□□□□ -2.52
RPA3P35244 MIR4788-201ENST00000639104 80 ntBASIC-0.71□□□□□ -2.52
RPA3P35244 MIR101-2-201ENST00000362195 79 ntBASIC-0.72□□□□□ -2.52
RPA3P35244 RNA5SP133-201ENST00000363368 119 ntBASIC-0.72□□□□□ -2.52
RPA3P35244 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.72□□□□□ -2.52
RPA3P35244 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.72□□□□□ -2.52
RPA3P35244 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.72□□□□□ -2.52
RPA3P35244 MIR1912-201ENST00000410389 80 ntBASIC-0.72□□□□□ -2.52
RPA3P35244 RNU6-130P-201ENST00000411112 103 ntBASIC-0.72□□□□□ -2.52
RPA3P35244 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.72□□□□□ -2.52
RPA3P35244 PMCHL1-202ENST00000423102 261 ntBASIC-0.72□□□□□ -2.52
RPA3P35244 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.72□□□□□ -2.52
RPA3P35244 PART1_1.1-201ENST00000611761 217 ntBASIC-0.72□□□□□ -2.52
RPA3P35244 AC084368.1-201ENST00000620935 65 ntBASIC-0.72□□□□□ -2.52
RPA3P35244 MTND4LP32-201ENST00000636111 270 ntBASIC-0.72□□□□□ -2.52
RPA3P35244 AC073869.9-201ENST00000641610 120 ntBASIC-0.72□□□□□ -2.52
RPA3P35244 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.73□□□□□ -2.53
RPA3P35244 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.73□□□□□ -2.53
RPA3P35244 SNORD113-8-201ENST00000363497 74 ntBASIC-0.73□□□□□ -2.53
RPA3P35244 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.73□□□□□ -2.53
RPA3P35244 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.73□□□□□ -2.53
RPA3P35244 RNU6-102P-201ENST00000384485 104 ntBASIC-0.73□□□□□ -2.53
RPA3P35244 MIR626-201ENST00000385032 94 ntBASIC-0.73□□□□□ -2.53
RPA3P35244 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
RPA3P35244 AC016907.1-201ENST00000419483 435 ntBASIC-0.73□□□□□ -2.53
RPA3P35244 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.73□□□□□ -2.53
RPA3P35244 RNU6-507P-201ENST00000516045 100 ntBASIC-0.73□□□□□ -2.53
RPA3P35244 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.73□□□□□ -2.53
RPA3P35244 AL360085.1-201ENST00000604713 532 ntBASIC-0.73□□□□□ -2.53
RPA3P35244 MIR8064-201ENST00000612863 90 ntBASIC-0.73□□□□□ -2.53
RPA3P35244 FTX_2.1-201ENST00000618816 94 ntBASIC-0.73□□□□□ -2.53
RPA3P35244 SNORD81.2-201ENST00000365153 76 ntBASIC-0.74□□□□□ -2.53
RPA3P35244 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.74□□□□□ -2.53
RPA3P35244 RNU6-1215P-201ENST00000384441 102 ntBASIC-0.74□□□□□ -2.53
RPA3P35244 SNORA32.3-201ENST00000384772 121 ntBASIC-0.74□□□□□ -2.53
RPA3P35244 MIR526A2-201ENST00000390198 65 ntBASIC-0.74□□□□□ -2.53
RPA3P35244 MIR876-201ENST00000401147 81 ntBASIC-0.74□□□□□ -2.53
RPA3P35244 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.74□□□□□ -2.53
RPA3P35244 AC109327.2-201ENST00000448339 378 ntBASIC-0.74□□□□□ -2.53
RPA3P35244 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.74□□□□□ -2.53
RPA3P35244 SNORA40.14-201ENST00000516543 86 ntBASIC-0.74□□□□□ -2.53
RPA3P35244 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.74□□□□□ -2.53
RPA3P35244 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.74□□□□□ -2.53
RPA3P35244 AC113139.1-201ENST00000605049 239 ntBASIC-0.74□□□□□ -2.53
RPA3P35244 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.74□□□□□ -2.53
RPA3P35244 MIR548AZ-201ENST00000616567 95 ntBASIC-0.74□□□□□ -2.53
RPA3P35244 AC007485.1-201ENST00000616755 206 ntBASIC-0.74□□□□□ -2.53
RPA3P35244 AC104985.2-201ENST00000620598 500 ntBASIC-0.74□□□□□ -2.53
RPA3P35244 uc_338.36-201ENST00000622331 158 ntBASIC-0.74□□□□□ -2.53
RPA3P35244 MTND5P32-201ENST00000560711 1802 ntBASIC-0.75□□□□□ -2.53
RPA3P35244 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.75□□□□□ -2.53
RPA3P35244 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.75□□□□□ -2.53
RPA3P35244 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.75□□□□□ -2.53
RPA3P35244 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.75□□□□□ -2.53
RPA3P35244 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.75□□□□□ -2.53
RPA3P35244 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.75□□□□□ -2.53
RPA3P35244 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.75□□□□□ -2.53
RPA3P35244 MIR196A2-201ENST00000385189 110 ntBASIC-0.75□□□□□ -2.53
RPA3P35244 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
RPA3P35244 SNORD41.1-201ENST00000391000 69 ntBASIC-0.75□□□□□ -2.53
RPA3P35244 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.75□□□□□ -2.53
RPA3P35244 AC006210.1-201ENST00000424882 111 ntBASIC-0.75□□□□□ -2.53
RPA3P35244 HSPE1P25-201ENST00000455484 251 ntBASIC-0.75□□□□□ -2.53
RPA3P35244 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.75□□□□□ -2.53
RPA3P35244 MIR4636-201ENST00000582271 80 ntBASIC-0.75□□□□□ -2.53
RPA3P35244 SNORD58B-201ENST00000607313 66 ntBASIC-0.75□□□□□ -2.53
RPA3P35244 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.75□□□□□ -2.53
RPA3P35244 AC021613.1-201ENST00000623880 111 ntBASIC-0.75□□□□□ -2.53
RPA3P35244 U6.109-201ENST00000636749 87 ntBASIC-0.75□□□□□ -2.53
RPA3P35244 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.76□□□□□ -2.53
RPA3P35244 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.76□□□□□ -2.53
RPA3P35244 RNA5SP403-201ENST00000363598 108 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms