Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 MIR548A3-201ENST00000385297 97 ntBASIC1.63□□□□□ -2.15
PTPN7P35236 RPS3AP1-201ENST00000413190 320 ntBASIC1.63□□□□□ -2.15
PTPN7P35236 RPS27P16-201ENST00000425758 201 ntBASIC1.63□□□□□ -2.15
PTPN7P35236 RNU6-893P-201ENST00000458841 100 ntBASIC1.63□□□□□ -2.15
PTPN7P35236 AP003716.2-201ENST00000528260 108 ntBASIC1.63□□□□□ -2.15
PTPN7P35236 MTND5P34-201ENST00000568888 325 ntBASIC1.63□□□□□ -2.15
PTPN7P35236 MIR3937-201ENST00000580135 106 ntBASIC1.63□□□□□ -2.15
PTPN7P35236 AP000942.3-201ENST00000603702 160 ntBASIC1.63□□□□□ -2.15
PTPN7P35236 SNORD115-2-201ENST00000362842 82 ntBASIC1.62□□□□□ -2.15
PTPN7P35236 RNU6-1325P-201ENST00000364905 105 ntBASIC1.62□□□□□ -2.15
PTPN7P35236 SNORD115-20-201ENST00000365099 82 ntBASIC1.62□□□□□ -2.15
PTPN7P35236 RNU6-1065P-201ENST00000384513 106 ntBASIC1.62□□□□□ -2.15
PTPN7P35236 MIR320A-201ENST00000385302 82 ntBASIC1.62□□□□□ -2.15
PTPN7P35236 MIR934-201ENST00000401241 83 ntBASIC1.62□□□□□ -2.15
PTPN7P35236 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.62□□□□□ -2.15
PTPN7P35236 RPL30P7-201ENST00000479312 323 ntBASIC1.62□□□□□ -2.15
PTPN7P35236 RNU6-947P-201ENST00000516264 106 ntBASIC1.62□□□□□ -2.15
PTPN7P35236 AL512310.8-201ENST00000550183 120 ntBASIC1.62□□□□□ -2.15
PTPN7P35236 MIR4422-201ENST00000581938 83 ntBASIC1.62□□□□□ -2.15
PTPN7P35236 MIR6129-201ENST00000616087 109 ntBASIC1.62□□□□□ -2.15
PTPN7P35236 AL121890.5-201ENST00000620848 304 ntBASIC1.62□□□□□ -2.15
PTPN7P35236 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
PTPN7P35236 SNORA26.9-201ENST00000391322 122 ntBASIC1.61□□□□□ -2.15
PTPN7P35236 RNU6-602P-201ENST00000411155 105 ntBASIC1.61□□□□□ -2.15
PTPN7P35236 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.61□□□□□ -2.15
PTPN7P35236 AC245517.4-201ENST00000448601 281 ntBASIC1.61□□□□□ -2.15
PTPN7P35236 AL133373.1-201ENST00000497098 94 ntBASIC1.61□□□□□ -2.15
PTPN7P35236 RNA5SP445-201ENST00000515889 115 ntBASIC1.61□□□□□ -2.15
PTPN7P35236 RNU6-295P-201ENST00000516901 104 ntBASIC1.61□□□□□ -2.15
PTPN7P35236 PRELID3BP2-201ENST00000605362 201 ntBASIC1.61□□□□□ -2.15
PTPN7P35236 MIR8065-201ENST00000620577 100 ntBASIC1.61□□□□□ -2.15
PTPN7P35236 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
PTPN7P35236 Y_RNA.470-201ENST00000384307 117 ntBASIC1.6□□□□□ -2.15
PTPN7P35236 MIR548A1-201ENST00000385041 97 ntBASIC1.6□□□□□ -2.15
PTPN7P35236 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.6□□□□□ -2.15
PTPN7P35236 RPL39P39-201ENST00000455840 151 ntBASIC1.6□□□□□ -2.15
PTPN7P35236 RNU7-113P-201ENST00000459273 62 ntBASIC1.6□□□□□ -2.15
PTPN7P35236 AC113410.1-201ENST00000505029 247 ntBASIC1.6□□□□□ -2.15
PTPN7P35236 BX248123.2-201ENST00000606318 124 ntBASIC1.6□□□□□ -2.15
PTPN7P35236 AP000648.3-201ENST00000623539 4507 ntBASIC1.59□□□□□ -2.15
PTPN7P35236 SNORA25.3-201ENST00000363205 127 ntBASIC1.59□□□□□ -2.15
PTPN7P35236 Y_RNA.213-201ENST00000364178 111 ntBASIC1.59□□□□□ -2.15
PTPN7P35236 SNORD116-21-201ENST00000384507 92 ntBASIC1.59□□□□□ -2.15
PTPN7P35236 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
PTPN7P35236 MIR1289-2-201ENST00000408360 111 ntBASIC1.59□□□□□ -2.15
PTPN7P35236 RPS23P4-201ENST00000487908 423 ntBASIC1.59□□□□□ -2.15
PTPN7P35236 RNU6-589P-201ENST00000516485 107 ntBASIC1.59□□□□□ -2.15
PTPN7P35236 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.59□□□□□ -2.15
PTPN7P35236 CYP3A52P-201ENST00000563326 91 ntBASIC1.59□□□□□ -2.15
PTPN7P35236 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.59□□□□□ -2.15
PTPN7P35236 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.59□□□□□ -2.15
PTPN7P35236 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.58□□□□□ -2.16
PTPN7P35236 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
PTPN7P35236 Y_RNA.35-201ENST00000362601 101 ntBASIC1.58□□□□□ -2.16
PTPN7P35236 MIR504-201ENST00000385065 83 ntBASIC1.58□□□□□ -2.16
PTPN7P35236 RNU6-902P-201ENST00000517212 91 ntBASIC1.58□□□□□ -2.16
PTPN7P35236 MIR4285-201ENST00000581001 85 ntBASIC1.58□□□□□ -2.16
PTPN7P35236 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
PTPN7P35236 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
PTPN7P35236 MIR517C-201ENST00000385103 95 ntBASIC1.57□□□□□ -2.16
PTPN7P35236 MIR1185-1-201ENST00000408598 86 ntBASIC1.57□□□□□ -2.16
PTPN7P35236 AC244023.1-201ENST00000426884 112 ntBASIC1.57□□□□□ -2.16
PTPN7P35236 SNORA25.15-201ENST00000516487 89 ntBASIC1.57□□□□□ -2.16
PTPN7P35236 RNU6-919P-201ENST00000516731 104 ntBASIC1.57□□□□□ -2.16
PTPN7P35236 AC007012.1-201ENST00000567192 175 ntBASIC1.57□□□□□ -2.16
PTPN7P35236 AC242498.1-201ENST00000604134 111 ntBASIC1.57□□□□□ -2.16
PTPN7P35236 RNA5SP264-201ENST00000363115 107 ntBASIC1.56□□□□□ -2.16
PTPN7P35236 RNY4P6-201ENST00000363667 96 ntBASIC1.56□□□□□ -2.16
PTPN7P35236 Y_RNA.354-201ENST00000365448 111 ntBASIC1.56□□□□□ -2.16
PTPN7P35236 SNORD38B-201ENST00000384690 67 ntBASIC1.56□□□□□ -2.16
PTPN7P35236 MIR759-201ENST00000390224 91 ntBASIC1.56□□□□□ -2.16
PTPN7P35236 RNY4P18-201ENST00000391107 89 ntBASIC1.56□□□□□ -2.16
PTPN7P35236 RNU6-1054P-201ENST00000411293 104 ntBASIC1.56□□□□□ -2.16
PTPN7P35236 AC245047.7-201ENST00000440265 293 ntBASIC1.56□□□□□ -2.16
PTPN7P35236 MIR1270-201ENST00000459320 83 ntBASIC1.56□□□□□ -2.16
PTPN7P35236 Y_RNA.709-201ENST00000516952 92 ntBASIC1.56□□□□□ -2.16
PTPN7P35236 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.56□□□□□ -2.16
PTPN7P35236 MIR4679-2-201ENST00000578358 77 ntBASIC1.56□□□□□ -2.16
PTPN7P35236 MIR3163-201ENST00000581592 73 ntBASIC1.56□□□□□ -2.16
PTPN7P35236 MIR3945-201ENST00000581853 98 ntBASIC1.56□□□□□ -2.16
PTPN7P35236 SNORD38B-202ENST00000625943 69 ntBASIC1.56□□□□□ -2.16
PTPN7P35236 RNU6-880P-201ENST00000384526 107 ntBASIC1.55□□□□□ -2.16
PTPN7P35236 SNORD12C-201ENST00000386307 89 ntBASIC1.55□□□□□ -2.16
PTPN7P35236 RNU4-69P-201ENST00000410677 143 ntBASIC1.55□□□□□ -2.16
PTPN7P35236 AL035461.1-201ENST00000421490 332 ntBASIC1.55□□□□□ -2.16
PTPN7P35236 AC063976.4-201ENST00000421971 163 ntBASIC1.55□□□□□ -2.16
PTPN7P35236 RNA5SP33-201ENST00000516687 98 ntBASIC1.55□□□□□ -2.16
PTPN7P35236 MIR548AE2-201ENST00000583456 67 ntBASIC1.55□□□□□ -2.16
PTPN7P35236 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.55□□□□□ -2.16
PTPN7P35236 AC087741.2-201ENST00000619415 172 ntBASIC1.55□□□□□ -2.16
PTPN7P35236 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
PTPN7P35236 Y_RNA.281-201ENST00000364774 94 ntBASIC1.54□□□□□ -2.16
PTPN7P35236 Y_RNA.299-201ENST00000364973 94 ntBASIC1.54□□□□□ -2.16
PTPN7P35236 Y_RNA.549-201ENST00000384657 102 ntBASIC1.54□□□□□ -2.16
PTPN7P35236 MIR548D2-201ENST00000384955 97 ntBASIC1.54□□□□□ -2.16
PTPN7P35236 MIR1323-201ENST00000408090 73 ntBASIC1.54□□□□□ -2.16
PTPN7P35236 MIR1304-201ENST00000408243 91 ntBASIC1.54□□□□□ -2.16
PTPN7P35236 snoU13.15-201ENST00000459407 104 ntBASIC1.54□□□□□ -2.16
PTPN7P35236 RN7SL429P-201ENST00000479090 223 ntBASIC1.54□□□□□ -2.16
PTPN7P35236 RN7SL489P-201ENST00000486185 223 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms