Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RNU6-1319P-201ENST00000390855 104 ntBASIC1.64□□□□□ -2.15
SLC6A4P31645 RNU6-747P-201ENST00000390928 104 ntBASIC1.64□□□□□ -2.15
SLC6A4P31645 RNU6-241P-201ENST00000391148 104 ntBASIC1.64□□□□□ -2.15
SLC6A4P31645 RNU6-177P-201ENST00000411257 104 ntBASIC1.64□□□□□ -2.15
SLC6A4P31645 AC027119.1-201ENST00000440877 241 ntBASIC1.64□□□□□ -2.15
SLC6A4P31645 RNU6-240P-201ENST00000516098 97 ntBASIC1.64□□□□□ -2.15
SLC6A4P31645 RNU6-1061P-201ENST00000516530 99 ntBASIC1.64□□□□□ -2.15
SLC6A4P31645 AL359881.1-201ENST00000602916 267 ntBASIC1.64□□□□□ -2.15
SLC6A4P31645 AL645939.4-201ENST00000604495 135 ntBASIC1.64□□□□□ -2.15
SLC6A4P31645 AC021613.1-201ENST00000623880 111 ntBASIC1.64□□□□□ -2.15
SLC6A4P31645 MIR4251-201ENST00000635819 61 ntBASIC1.64□□□□□ -2.15
SLC6A4P31645 U6.95-201ENST00000636931 70 ntBASIC1.64□□□□□ -2.15
SLC6A4P31645 RNU6-834P-201ENST00000362367 110 ntBASIC1.63□□□□□ -2.15
SLC6A4P31645 SNORD58C-201ENST00000365223 64 ntBASIC1.63□□□□□ -2.15
SLC6A4P31645 Y_RNA.346-201ENST00000365385 112 ntBASIC1.63□□□□□ -2.15
SLC6A4P31645 SNORA22C-201ENST00000384614 134 ntBASIC1.63□□□□□ -2.15
SLC6A4P31645 RNU1-78P-201ENST00000391248 165 ntBASIC1.63□□□□□ -2.15
SLC6A4P31645 MIR1323-201ENST00000408090 73 ntBASIC1.63□□□□□ -2.15
SLC6A4P31645 snoU13.18-201ENST00000459483 104 ntBASIC1.63□□□□□ -2.15
SLC6A4P31645 MIR3937-201ENST00000580135 106 ntBASIC1.63□□□□□ -2.15
SLC6A4P31645 AC108081.1-201ENST00000604358 221 ntBASIC1.63□□□□□ -2.15
SLC6A4P31645 AC021443.1-201ENST00000604478 211 ntBASIC1.63□□□□□ -2.15
SLC6A4P31645 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.63□□□□□ -2.15
SLC6A4P31645 Y_RNA.366-201ENST00000365540 102 ntBASIC1.62□□□□□ -2.15
SLC6A4P31645 Y_RNA.430-201ENST00000384081 110 ntBASIC1.62□□□□□ -2.15
SLC6A4P31645 MIR570-201ENST00000384917 97 ntBASIC1.62□□□□□ -2.15
SLC6A4P31645 RNU7-107P-201ENST00000459121 61 ntBASIC1.62□□□□□ -2.15
SLC6A4P31645 BX248123.2-201ENST00000606318 124 ntBASIC1.62□□□□□ -2.15
SLC6A4P31645 AL020996.3-201ENST00000606617 222 ntBASIC1.62□□□□□ -2.15
SLC6A4P31645 MIR3914-2-201ENST00000637339 95 ntBASIC1.62□□□□□ -2.15
SLC6A4P31645 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
SLC6A4P31645 AP000648.3-201ENST00000623539 4507 ntBASIC1.62□□□□□ -2.15
SLC6A4P31645 Y_RNA.261-201ENST00000364631 102 ntBASIC1.61□□□□□ -2.15
SLC6A4P31645 Y_RNA.466-201ENST00000384294 113 ntBASIC1.61□□□□□ -2.15
SLC6A4P31645 MIRLET7F2-201ENST00000385277 83 ntBASIC1.61□□□□□ -2.15
SLC6A4P31645 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.61□□□□□ -2.15
SLC6A4P31645 MIR4305-201ENST00000583252 102 ntBASIC1.61□□□□□ -2.15
SLC6A4P31645 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SLC6A4P31645 RNU1-42P-201ENST00000364033 160 ntBASIC1.6□□□□□ -2.15
SLC6A4P31645 SNORA1.1-201ENST00000364671 133 ntBASIC1.6□□□□□ -2.15
SLC6A4P31645 Y_RNA.354-201ENST00000365448 111 ntBASIC1.6□□□□□ -2.15
SLC6A4P31645 AL022718.1-201ENST00000412004 84 ntBASIC1.6□□□□□ -2.15
SLC6A4P31645 RNU7-95P-201ENST00000459222 64 ntBASIC1.6□□□□□ -2.15
SLC6A4P31645 COX6CP6-201ENST00000490840 228 ntBASIC1.6□□□□□ -2.15
SLC6A4P31645 RNU7-41P-201ENST00000515917 61 ntBASIC1.6□□□□□ -2.15
SLC6A4P31645 AC019176.1-201ENST00000518519 225 ntBASIC1.6□□□□□ -2.15
SLC6A4P31645 AC025166.1-201ENST00000612411 163 ntBASIC1.6□□□□□ -2.15
SLC6A4P31645 Y_RNA.273-201ENST00000364703 102 ntBASIC1.59□□□□□ -2.15
SLC6A4P31645 RNU6-60P-201ENST00000364792 103 ntBASIC1.59□□□□□ -2.15
SLC6A4P31645 RNU6-913P-201ENST00000390913 95 ntBASIC1.59□□□□□ -2.15
SLC6A4P31645 RNA5SP144-201ENST00000410846 116 ntBASIC1.59□□□□□ -2.15
SLC6A4P31645 Y_RNA.629-201ENST00000411368 105 ntBASIC1.59□□□□□ -2.15
SLC6A4P31645 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.59□□□□□ -2.15
SLC6A4P31645 AC009474.2-201ENST00000451383 136 ntBASIC1.59□□□□□ -2.15
SLC6A4P31645 RNU7-164P-201ENST00000459221 62 ntBASIC1.59□□□□□ -2.15
SLC6A4P31645 SNORD53B-201ENST00000577887 78 ntBASIC1.59□□□□□ -2.15
SLC6A4P31645 MIR3664-201ENST00000579074 99 ntBASIC1.59□□□□□ -2.15
SLC6A4P31645 MIR8055-201ENST00000610739 97 ntBASIC1.59□□□□□ -2.15
SLC6A4P31645 AL096861.1-201ENST00000610899 123 ntBASIC1.59□□□□□ -2.15
SLC6A4P31645 MIR6717-201ENST00000622747 73 ntBASIC1.59□□□□□ -2.15
SLC6A4P31645 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.59□□□□□ -2.15
SLC6A4P31645 Z97988.1-201ENST00000637697 135 ntBASIC1.59□□□□□ -2.15
SLC6A4P31645 RNU4-16P-201ENST00000364737 141 ntBASIC1.58□□□□□ -2.16
SLC6A4P31645 RNU6-392P-201ENST00000364926 101 ntBASIC1.58□□□□□ -2.16
SLC6A4P31645 Y_RNA.298-201ENST00000364960 107 ntBASIC1.58□□□□□ -2.16
SLC6A4P31645 Y_RNA.327-201ENST00000365201 102 ntBASIC1.58□□□□□ -2.16
SLC6A4P31645 MIR489-201ENST00000384923 84 ntBASIC1.58□□□□□ -2.16
SLC6A4P31645 SNORA26.6-201ENST00000391256 115 ntBASIC1.58□□□□□ -2.16
SLC6A4P31645 RPS3AP1-201ENST00000413190 320 ntBASIC1.58□□□□□ -2.16
SLC6A4P31645 AL133373.1-201ENST00000497098 94 ntBASIC1.58□□□□□ -2.16
SLC6A4P31645 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.58□□□□□ -2.16
SLC6A4P31645 CYP3A52P-201ENST00000563326 91 ntBASIC1.58□□□□□ -2.16
SLC6A4P31645 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SLC6A4P31645 Y_RNA.213-201ENST00000364178 111 ntBASIC1.57□□□□□ -2.16
SLC6A4P31645 Y_RNA.224-201ENST00000364308 111 ntBASIC1.57□□□□□ -2.16
SLC6A4P31645 MIR759-201ENST00000390224 91 ntBASIC1.57□□□□□ -2.16
SLC6A4P31645 MIR1263-201ENST00000408324 86 ntBASIC1.57□□□□□ -2.16
SLC6A4P31645 SNORA31.4-201ENST00000516049 129 ntBASIC1.57□□□□□ -2.16
SLC6A4P31645 RNU6-781P-201ENST00000516377 101 ntBASIC1.57□□□□□ -2.16
SLC6A4P31645 RNU6-902P-201ENST00000517212 91 ntBASIC1.57□□□□□ -2.16
SLC6A4P31645 IGKV1-22-201ENST00000524313 326 ntBASIC1.57□□□□□ -2.16
SLC6A4P31645 AL512310.8-201ENST00000550183 120 ntBASIC1.57□□□□□ -2.16
SLC6A4P31645 MIR4285-201ENST00000581001 85 ntBASIC1.57□□□□□ -2.16
SLC6A4P31645 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.57□□□□□ -2.16
SLC6A4P31645 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.57□□□□□ -2.16
SLC6A4P31645 MIR6841-201ENST00000637129 72 ntBASIC1.57□□□□□ -2.16
SLC6A4P31645 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SLC6A4P31645 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.56□□□□□ -2.16
SLC6A4P31645 SNORA22.1-201ENST00000362701 134 ntBASIC1.56□□□□□ -2.16
SLC6A4P31645 RNA5SP363-201ENST00000365072 115 ntBASIC1.56□□□□□ -2.16
SLC6A4P31645 Y_RNA.528-201ENST00000384575 108 ntBASIC1.56□□□□□ -2.16
SLC6A4P31645 RNU6-947P-201ENST00000516264 106 ntBASIC1.56□□□□□ -2.16
SLC6A4P31645 RNY4P20-201ENST00000516678 93 ntBASIC1.56□□□□□ -2.16
SLC6A4P31645 RNU11-2P-201ENST00000516898 142 ntBASIC1.56□□□□□ -2.16
SLC6A4P31645 MIR3192-201ENST00000584920 77 ntBASIC1.56□□□□□ -2.16
SLC6A4P31645 MIR6504-201ENST00000613520 61 ntBASIC1.56□□□□□ -2.16
SLC6A4P31645 AL121890.5-201ENST00000620848 304 ntBASIC1.56□□□□□ -2.16
SLC6A4P31645 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SLC6A4P31645 MTND5P18-201ENST00000445624 1801 ntBASIC1.55□□□□□ -2.16
SLC6A4P31645 Y_RNA.198-201ENST00000364013 98 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms