Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RNU7-43P-201ENST00000516554 64 ntBASIC2.92□□□□□ -1.94
VARSP26640 MIR4764-201ENST00000580680 88 ntBASIC2.92□□□□□ -1.94
VARSP26640 MIR3162-201ENST00000581818 82 ntBASIC2.92□□□□□ -1.94
VARSP26640 AP006437.1-201ENST00000641440 3685 ntBASIC2.92□□□□□ -1.94
VARSP26640 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VARSP26640 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
VARSP26640 RNU6-851P-201ENST00000384565 107 ntBASIC2.91□□□□□ -1.94
VARSP26640 MIR1283-2-201ENST00000408621 87 ntBASIC2.91□□□□□ -1.94
VARSP26640 Z98742.3-201ENST00000418637 326 ntBASIC2.91□□□□□ -1.94
VARSP26640 SNORD4B-201ENST00000459083 72 ntBASIC2.91□□□□□ -1.94
VARSP26640 AC114801.3-201ENST00000510231 177 ntBASIC2.91□□□□□ -1.94
VARSP26640 AC133485.1-201ENST00000567176 124 ntBASIC2.91□□□□□ -1.94
VARSP26640 RNA5SP133-201ENST00000363368 119 ntBASIC2.9□□□□□ -1.95
VARSP26640 RNU1-148P-201ENST00000384472 162 ntBASIC2.9□□□□□ -1.95
VARSP26640 AC027119.1-201ENST00000440877 241 ntBASIC2.9□□□□□ -1.95
VARSP26640 RPS29P11-201ENST00000496507 171 ntBASIC2.9□□□□□ -1.95
VARSP26640 MIR548AO-201ENST00000579992 96 ntBASIC2.9□□□□□ -1.95
VARSP26640 MIR3124-201ENST00000582636 67 ntBASIC2.9□□□□□ -1.95
VARSP26640 MIR8066-201ENST00000617280 78 ntBASIC2.9□□□□□ -1.95
VARSP26640 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VARSP26640 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
VARSP26640 SNORD38B-201ENST00000384690 67 ntBASIC2.89□□□□□ -1.95
VARSP26640 MIR520C-201ENST00000385005 87 ntBASIC2.89□□□□□ -1.95
VARSP26640 SUB1P4-201ENST00000566062 339 ntBASIC2.89□□□□□ -1.95
VARSP26640 MIR4672-201ENST00000583126 81 ntBASIC2.89□□□□□ -1.95
VARSP26640 Y_RNA.788-201ENST00000622394 112 ntBASIC2.89□□□□□ -1.95
VARSP26640 SNORD38B-202ENST00000625943 69 ntBASIC2.89□□□□□ -1.95
VARSP26640 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
VARSP26640 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VARSP26640 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.88□□□□□ -1.95
VARSP26640 HSBP1P2-201ENST00000299671 229 ntBASIC2.88□□□□□ -1.95
VARSP26640 MIR424-201ENST00000362227 98 ntBASIC2.88□□□□□ -1.95
VARSP26640 RNU6-112P-201ENST00000363599 104 ntBASIC2.88□□□□□ -1.95
VARSP26640 RNU6-296P-201ENST00000384608 107 ntBASIC2.88□□□□□ -1.95
VARSP26640 AC019129.1-201ENST00000403786 261 ntBASIC2.88□□□□□ -1.95
VARSP26640 SNORD88.1-201ENST00000408684 91 ntBASIC2.88□□□□□ -1.95
VARSP26640 RNA5SP237-201ENST00000410414 113 ntBASIC2.88□□□□□ -1.95
VARSP26640 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.88□□□□□ -1.95
VARSP26640 AC108206.1-201ENST00000570186 4159 ntBASIC2.87□□□□□ -1.95
VARSP26640 RNU6-624P-201ENST00000363411 107 ntBASIC2.87□□□□□ -1.95
VARSP26640 SNORA48.1-201ENST00000390879 135 ntBASIC2.87□□□□□ -1.95
VARSP26640 RPS29P6-201ENST00000438196 145 ntBASIC2.87□□□□□ -1.95
VARSP26640 AC011753.1-201ENST00000451001 220 ntBASIC2.87□□□□□ -1.95
VARSP26640 RNA5SP481-201ENST00000516814 122 ntBASIC2.87□□□□□ -1.95
VARSP26640 RNA5SP137-201ENST00000516833 135 ntBASIC2.87□□□□□ -1.95
VARSP26640 AC141846.1-201ENST00000568348 142 ntBASIC2.87□□□□□ -1.95
VARSP26640 MIR4435-1-201ENST00000582552 80 ntBASIC2.87□□□□□ -1.95
VARSP26640 AC104984.5-201ENST00000586878 94 ntBASIC2.87□□□□□ -1.95
VARSP26640 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.87□□□□□ -1.95
VARSP26640 RNA5SP465-201ENST00000391195 109 ntBASIC2.86□□□□□ -1.95
VARSP26640 SUMO1P4-201ENST00000429430 302 ntBASIC2.86□□□□□ -1.95
VARSP26640 snoU13.11-201ENST00000459219 104 ntBASIC2.86□□□□□ -1.95
VARSP26640 RNU6-523P-201ENST00000516304 54 ntBASIC2.86□□□□□ -1.95
VARSP26640 AP000753.3-201ENST00000604083 169 ntBASIC2.86□□□□□ -1.95
VARSP26640 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.86□□□□□ -1.95
VARSP26640 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VARSP26640 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
VARSP26640 MAPK10-266ENST00000641066 6555 ntBASIC2.85□□□□□ -1.95
VARSP26640 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.85□□□□□ -1.95
VARSP26640 RNU4-83P-201ENST00000410863 133 ntBASIC2.85□□□□□ -1.95
VARSP26640 AC090897.1-201ENST00000580909 226 ntBASIC2.85□□□□□ -1.95
VARSP26640 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VARSP26640 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VARSP26640 RNY1P2-201ENST00000364820 117 ntBASIC2.84□□□□□ -1.95
VARSP26640 RNU6-590P-201ENST00000365039 107 ntBASIC2.84□□□□□ -1.95
VARSP26640 RNU1-52P-201ENST00000384190 164 ntBASIC2.84□□□□□ -1.95
VARSP26640 Y_RNA.508-201ENST00000384502 114 ntBASIC2.84□□□□□ -1.95
VARSP26640 MIR518A2-201ENST00000384966 87 ntBASIC2.84□□□□□ -1.95
VARSP26640 RNA5SP501-201ENST00000410990 112 ntBASIC2.84□□□□□ -1.95
VARSP26640 RNA5SP184-201ENST00000411071 108 ntBASIC2.84□□□□□ -1.95
VARSP26640 EEF1A1P41-201ENST00000414667 207 ntBASIC2.84□□□□□ -1.95
VARSP26640 AC105272.1-201ENST00000438604 198 ntBASIC2.84□□□□□ -1.95
VARSP26640 RNA5SP356-201ENST00000515972 94 ntBASIC2.84□□□□□ -1.95
VARSP26640 RNU6-917P-201ENST00000516294 104 ntBASIC2.84□□□□□ -1.95
VARSP26640 MIR4500-201ENST00000579472 76 ntBASIC2.84□□□□□ -1.95
VARSP26640 MIR4251-201ENST00000635819 61 ntBASIC2.84□□□□□ -1.95
VARSP26640 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
VARSP26640 RNU7-85P-201ENST00000458851 63 ntBASIC2.83□□□□□ -1.96
VARSP26640 RPS27P21-201ENST00000486977 252 ntBASIC2.83□□□□□ -1.96
VARSP26640 GTF3AP2-201ENST00000557014 266 ntBASIC2.83□□□□□ -1.96
VARSP26640 AL512598.1-201ENST00000610158 273 ntBASIC2.83□□□□□ -1.96
VARSP26640 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VARSP26640 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
VARSP26640 MIR3935-201ENST00000583472 104 ntBASIC2.82□□□□□ -1.96
VARSP26640 AL662814.1-201ENST00000617364 121 ntBASIC2.82□□□□□ -1.96
VARSP26640 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.81□□□□□ -1.96
VARSP26640 MIR449A-201ENST00000362113 91 ntBASIC2.81□□□□□ -1.96
VARSP26640 RNA5SP126-201ENST00000365092 109 ntBASIC2.81□□□□□ -1.96
VARSP26640 RNU6-380P-201ENST00000410207 107 ntBASIC2.81□□□□□ -1.96
VARSP26640 SCARNA18B-201ENST00000458806 135 ntBASIC2.81□□□□□ -1.96
VARSP26640 RNA5SP445-201ENST00000515889 115 ntBASIC2.81□□□□□ -1.96
VARSP26640 RNU6-557P-201ENST00000516842 110 ntBASIC2.81□□□□□ -1.96
VARSP26640 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.81□□□□□ -1.96
VARSP26640 MIR3134-201ENST00000579433 74 ntBASIC2.81□□□□□ -1.96
VARSP26640 MIR5194-201ENST00000582634 120 ntBASIC2.81□□□□□ -1.96
VARSP26640 FO624990.1-201ENST00000636373 85 ntBASIC2.81□□□□□ -1.96
VARSP26640 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VARSP26640 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VARSP26640 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
VARSP26640 MIRLET7A1-201ENST00000362295 80 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 192.2 ms