Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 SNORD114-31-201ENST00000363219 75 ntBASIC-0.18□□□□□ -2.44
USF1P22415 SNORA63.7-201ENST00000365579 123 ntBASIC-0.18□□□□□ -2.44
USF1P22415 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.18□□□□□ -2.44
USF1P22415 SNORD115-46-201ENST00000390982 71 ntBASIC-0.18□□□□□ -2.44
USF1P22415 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.18□□□□□ -2.44
USF1P22415 MIR4743-201ENST00000584576 69 ntBASIC-0.18□□□□□ -2.44
USF1P22415 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.18□□□□□ -2.44
USF1P22415 AC007485.1-201ENST00000616755 206 ntBASIC-0.18□□□□□ -2.44
USF1P22415 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.19□□□□□ -2.44
USF1P22415 RNU6-756P-201ENST00000383997 107 ntBASIC-0.19□□□□□ -2.44
USF1P22415 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.19□□□□□ -2.44
USF1P22415 MIR643-201ENST00000385267 97 ntBASIC-0.19□□□□□ -2.44
USF1P22415 MIR760-201ENST00000390220 80 ntBASIC-0.19□□□□□ -2.44
USF1P22415 U8.15-201ENST00000390947 134 ntBASIC-0.19□□□□□ -2.44
USF1P22415 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.19□□□□□ -2.44
USF1P22415 RNU2-55P-201ENST00000411146 174 ntBASIC-0.19□□□□□ -2.44
USF1P22415 FGF7P4-201ENST00000509595 295 ntBASIC-0.19□□□□□ -2.44
USF1P22415 RNU7-129P-201ENST00000516128 62 ntBASIC-0.19□□□□□ -2.44
USF1P22415 MIR4639-201ENST00000584938 69 ntBASIC-0.19□□□□□ -2.44
USF1P22415 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.19□□□□□ -2.44
USF1P22415 AC112487.2-201ENST00000637950 304 ntBASIC-0.19□□□□□ -2.44
USF1P22415 RNA5SP128-201ENST00000365305 116 ntBASIC-0.2□□□□□ -2.44
USF1P22415 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.2□□□□□ -2.44
USF1P22415 SNORD28-201ENST00000384706 75 ntBASIC-0.2□□□□□ -2.44
USF1P22415 MIR214-201ENST00000385214 110 ntBASIC-0.2□□□□□ -2.44
USF1P22415 HAR1A.1-201ENST00000459583 118 ntBASIC-0.2□□□□□ -2.44
USF1P22415 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.2□□□□□ -2.44
USF1P22415 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
USF1P22415 MIR3152-201ENST00000579801 74 ntBASIC-0.2□□□□□ -2.44
USF1P22415 MIR4491-201ENST00000581087 68 ntBASIC-0.2□□□□□ -2.44
USF1P22415 AC006006.1-201ENST00000603082 144 ntBASIC-0.2□□□□□ -2.44
USF1P22415 RNU1-29P-201ENST00000606574 126 ntBASIC-0.2□□□□□ -2.44
USF1P22415 AC139792.2-201ENST00000624218 587 ntBASIC-0.2□□□□□ -2.44
USF1P22415 RNA5SP98-201ENST00000363158 137 ntBASIC-0.21□□□□□ -2.44
USF1P22415 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.21□□□□□ -2.44
USF1P22415 RNU6-514P-201ENST00000384208 107 ntBASIC-0.21□□□□□ -2.44
USF1P22415 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.21□□□□□ -2.44
USF1P22415 MIR593-201ENST00000384856 100 ntBASIC-0.21□□□□□ -2.44
USF1P22415 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.21□□□□□ -2.44
USF1P22415 MIR892B-201ENST00000401279 77 ntBASIC-0.21□□□□□ -2.44
USF1P22415 RNU7-45P-201ENST00000459460 63 ntBASIC-0.21□□□□□ -2.44
USF1P22415 RNU6-507P-201ENST00000516045 100 ntBASIC-0.21□□□□□ -2.44
USF1P22415 AC037487.3-201ENST00000606668 112 ntBASIC-0.21□□□□□ -2.44
USF1P22415 AC090574.1-201ENST00000623186 233 ntBASIC-0.21□□□□□ -2.44
USF1P22415 SNORA25.1-201ENST00000362326 128 ntBASIC-0.22□□□□□ -2.44
USF1P22415 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.22□□□□□ -2.44
USF1P22415 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.22□□□□□ -2.44
USF1P22415 RNU6-290P-201ENST00000365212 101 ntBASIC-0.22□□□□□ -2.44
USF1P22415 RNU6-326P-201ENST00000365480 107 ntBASIC-0.22□□□□□ -2.44
USF1P22415 RNU6-929P-201ENST00000384429 107 ntBASIC-0.22□□□□□ -2.44
USF1P22415 RNU6-291P-201ENST00000384720 107 ntBASIC-0.22□□□□□ -2.44
USF1P22415 SNORA53-201ENST00000391141 249 ntBASIC-0.22□□□□□ -2.44
USF1P22415 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.22□□□□□ -2.44
USF1P22415 RNU7-80P-201ENST00000459562 61 ntBASIC-0.22□□□□□ -2.44
USF1P22415 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.22□□□□□ -2.44
USF1P22415 RNA5SP153-201ENST00000516498 76 ntBASIC-0.22□□□□□ -2.44
USF1P22415 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.22□□□□□ -2.44
USF1P22415 AC141846.1-201ENST00000568348 142 ntBASIC-0.22□□□□□ -2.44
USF1P22415 RNU6-161P-201ENST00000363051 106 ntBASIC-0.23□□□□□ -2.45
USF1P22415 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.23□□□□□ -2.45
USF1P22415 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.23□□□□□ -2.45
USF1P22415 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.23□□□□□ -2.45
USF1P22415 RNU4-10P-201ENST00000364383 140 ntBASIC-0.23□□□□□ -2.45
USF1P22415 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.23□□□□□ -2.45
USF1P22415 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.23□□□□□ -2.45
USF1P22415 RNU6-662P-201ENST00000384253 104 ntBASIC-0.23□□□□□ -2.45
USF1P22415 SNORA72.6-201ENST00000384520 129 ntBASIC-0.23□□□□□ -2.45
USF1P22415 SNORA8.3-201ENST00000384679 139 ntBASIC-0.23□□□□□ -2.45
USF1P22415 RNU6-535P-201ENST00000384722 107 ntBASIC-0.23□□□□□ -2.45
USF1P22415 MIR215-201ENST00000384858 110 ntBASIC-0.23□□□□□ -2.45
USF1P22415 AC096949.1-201ENST00000412047 152 ntBASIC-0.23□□□□□ -2.45
USF1P22415 AL731563.1-201ENST00000442202 214 ntBASIC-0.23□□□□□ -2.45
USF1P22415 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.23□□□□□ -2.45
USF1P22415 RNU6-782P-201ENST00000516852 104 ntBASIC-0.23□□□□□ -2.45
USF1P22415 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.23□□□□□ -2.45
USF1P22415 MIR1295B-201ENST00000636144 60 ntBASIC-0.23□□□□□ -2.45
USF1P22415 MIR499B-201ENST00000636498 73 ntBASIC-0.23□□□□□ -2.45
USF1P22415 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.23□□□□□ -2.45
USF1P22415 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.24□□□□□ -2.45
USF1P22415 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.24□□□□□ -2.45
USF1P22415 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.24□□□□□ -2.45
USF1P22415 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.24□□□□□ -2.45
USF1P22415 RNU6-597P-201ENST00000365620 102 ntBASIC-0.24□□□□□ -2.45
USF1P22415 RNU6-949P-201ENST00000384040 107 ntBASIC-0.24□□□□□ -2.45
USF1P22415 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.24□□□□□ -2.45
USF1P22415 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.24□□□□□ -2.45
USF1P22415 SNORA27.4-201ENST00000516650 95 ntBASIC-0.24□□□□□ -2.45
USF1P22415 RNU6-897P-201ENST00000517135 105 ntBASIC-0.24□□□□□ -2.45
USF1P22415 AC097639.2-201ENST00000603159 172 ntBASIC-0.24□□□□□ -2.45
USF1P22415 AL008718.3-201ENST00000610217 321 ntBASIC-0.24□□□□□ -2.45
USF1P22415 AC244669.1-204ENST00000621564 178 ntBASIC-0.24□□□□□ -2.45
USF1P22415 snoU18.1-201ENST00000629629 71 ntBASIC-0.24□□□□□ -2.45
USF1P22415 RNU6-484P-201ENST00000384016 107 ntBASIC-0.25□□□□□ -2.45
USF1P22415 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.25□□□□□ -2.45
USF1P22415 RNY3P5-201ENST00000384127 102 ntBASIC-0.25□□□□□ -2.45
USF1P22415 RPL39P34-201ENST00000477141 156 ntBASIC-0.25□□□□□ -2.45
USF1P22415 MIR4752-201ENST00000579672 72 ntBASIC-0.25□□□□□ -2.45
USF1P22415 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.26□□□□□ -2.45
USF1P22415 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.26□□□□□ -2.45
USF1P22415 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms